RNA–Protein interactions for RNA: ENST00000353739.8

RNF38-203, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 4,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-203ENST00000353739 COL15A1P39059 1388 aa4.54□□□□□ -1.68
RNF38-203ENST00000353739 RAD50Q92878 1312 aa4.54□□□□□ -1.68
RNF38-203ENST00000353739 MTX1Q13505 466 aa4.54□□□□□ -1.68
RNF38-203ENST00000353739 RFX7Q2KHR2 1363 aa4.53□□□□□ -1.68
RNF38-203ENST00000353739 OS9Q13438 667 aaPredicted RBP4.53□□□□□ -1.68
RNF38-203ENST00000353739 NBPF6Q5VWK0 638 aa4.53□□□□□ -1.68
RNF38-203ENST00000353739 KSR2Q6VAB6 950 aa4.53□□□□□ -1.68
RNF38-203ENST00000353739 NBPF4Q96M43 638 aa4.53□□□□□ -1.68
RNF38-203ENST00000353739 HEG1Q9ULI3 1381 aa4.53□□□□□ -1.68
RNF38-203ENST00000353739 ZBTB7CA1YPR0 619 aa4.53□□□□□ -1.68
RNF38-203ENST00000353739 MRE11P49959 708 aa4.53□□□□□ -1.68
RNF38-203ENST00000353739 CSPP1Q1MSJ5 1256 aa4.53□□□□□ -1.68
RNF38-203ENST00000353739 NUTM2GQ5VZR2 741 aa4.53□□□□□ -1.68
RNF38-203ENST00000353739 LARP1Q6PKG0 1096 aaKnown RBP4.53□□□□□ -1.68
RNF38-203ENST00000353739 KIAA1211Q6ZU35 1233 aa4.53□□□□□ -1.68
RNF38-203ENST00000353739 TTC5Q8N0Z6 440 aa4.53□□□□□ -1.68
RNF38-203ENST00000353739 LRRFIP2Q9Y608 721 aaKnown RBP4.53□□□□□ -1.68
RNF38-203ENST00000353739 RGPD2P0DJD1 1756 aa4.53□□□□□ -1.68
RNF38-203ENST00000353739 GLRX3O76003 335 aaKnown RBP4.53□□□□□ -1.68
RNF38-203ENST00000353739 G2E3Q7L622 706 aa4.53□□□□□ -1.68
RNF38-203ENST00000353739 IFNL2Q8IZJ0 200 aa4.53□□□□□ -1.68
RNF38-203ENST00000353739 CHMP4CQ96CF2 233 aa4.53□□□□□ -1.68
RNF38-203ENST00000353739 ESYT1Q9BSJ8 1104 aa4.53□□□□□ -1.68
RNF38-203ENST00000353739 UTYO14607 1347 aa4.53□□□□□ -1.68
RNF38-203ENST00000353739 PAPPAQ13219 1627 aa4.53□□□□□ -1.68
RNF38-203ENST00000353739 TRIM6-TRIM34B2RNG4 842 aa4.53□□□□□ -1.69
RNF38-203ENST00000353739 BEND3Q5T5X7 828 aa4.53□□□□□ -1.69
RNF38-203ENST00000353739 INTS4Q96HW7 963 aaKnown RBP4.53□□□□□ -1.69
RNF38-203ENST00000353739 MIS18AQ9NYP9 233 aa4.53□□□□□ -1.69
RNF38-203ENST00000353739 C9orf78Q9NZ63 289 aaPredicted RBP4.53□□□□□ -1.69
RNF38-203ENST00000353739 PXDNQ92626 1479 aa4.52□□□□□ -1.69
RNF38-203ENST00000353739 COL18A1P39060 1754 aa4.52□□□□□ -1.69
RNF38-203ENST00000353739 SALL3Q9BXA9 1300 aa4.52□□□□□ -1.69
RNF38-203ENST00000353739 TRAK2O60296 914 aa4.52□□□□□ -1.69
RNF38-203ENST00000353739 KRT24Q2M2I5 525 aa4.52□□□□□ -1.69
RNF38-203ENST00000353739 SYAP1Q96A49 352 aaPredicted RBP4.52□□□□□ -1.69
RNF38-203ENST00000353739 DCAF5Q96JK2 942 aa4.52□□□□□ -1.69
RNF38-203ENST00000353739 ERBB3P21860 1342 aa4.52□□□□□ -1.69
RNF38-203ENST00000353739 NCLP19338 710 aaKnown RBP4.52□□□□□ -1.69
RNF38-203ENST00000353739 CLASRPQ8N2M8 674 aaKnown RBP4.52□□□□□ -1.69
RNF38-203ENST00000353739 DDX21Q9NR30 783 aaKnown RBP eCLIP4.52□□□□□ -1.69
RNF38-203ENST00000353739 F6X3S4 739 aa4.52□□□□□ -1.69
RNF38-203ENST00000353739 LINS1Q8NG48 757 aa4.52□□□□□ -1.69
RNF38-203ENST00000353739 SLC52A2Q9HAB3 445 aa4.52□□□□□ -1.69
RNF38-203ENST00000353739 CHPF2Q9P2E5 772 aa4.52□□□□□ -1.69
RNF38-203ENST00000353739 PCDH11XQ9BZA7 1347 aa4.52□□□□□ -1.69
RNF38-203ENST00000353739 PCDH11YQ9BZA8 1340 aa4.52□□□□□ -1.69
RNF38-203ENST00000353739 PHF14O94880 888 aa4.51□□□□□ -1.69
RNF38-203ENST00000353739 IFIT2P09913 472 aaKnown RBP4.51□□□□□ -1.69
RNF38-203ENST00000353739 EIF2S2P20042 333 aaKnown RBP4.51□□□□□ -1.69
RNF38-203ENST00000353739 G3BP1Q13283 466 aaKnown RBP eCLIP4.51□□□□□ -1.69
RNF38-203ENST00000353739 ZSCAN31Q96LW9 406 aaPredicted RBP4.51□□□□□ -1.69
RNF38-203ENST00000353739 AK9Q5TCS8 1911 aa4.51□□□□□ -1.69
RNF38-203ENST00000353739 SRGAP3O43295 1099 aa4.51□□□□□ -1.69
RNF38-203ENST00000353739 SURF6O75683 361 aaKnown RBP4.51□□□□□ -1.69
RNF38-203ENST00000353739 MBD3O95983 291 aa4.51□□□□□ -1.69
RNF38-203ENST00000353739 CSB-PGBD3P0DP91 1061 aa4.51□□□□□ -1.69
RNF38-203ENST00000353739 FAM43AQ8N2R8 423 aa4.51□□□□□ -1.69
RNF38-203ENST00000353739 USHBP1Q8N6Y0 703 aa4.51□□□□□ -1.69
RNF38-203ENST00000353739 RHPN1Q8TCX5 695 aa4.51□□□□□ -1.69
RNF38-203ENST00000353739 TNPO1Q92973 898 aaKnown RBP4.51□□□□□ -1.69
RNF38-203ENST00000353739 EVI5LQ96CN4 794 aa4.51□□□□□ -1.69
RNF38-203ENST00000353739 FMNL2Q96PY5 1086 aa4.51□□□□□ -1.69
RNF38-203ENST00000353739 USP44Q9H0E7 712 aa4.51□□□□□ -1.69
RNF38-203ENST00000353739 ATP6V1DQ9Y5K8 247 aa4.51□□□□□ -1.69
RNF38-203ENST00000353739 TMEM94Q12767 1356 aa4.51□□□□□ -1.69
RNF38-203ENST00000353739 GIGYF1O75420 1035 aaPredicted RBP4.51□□□□□ -1.69
RNF38-203ENST00000353739 SNRPA1P09661 255 aaKnown RBP4.51□□□□□ -1.69
RNF38-203ENST00000353739 CHMLP26374 656 aa4.51□□□□□ -1.69
RNF38-203ENST00000353739 PPP1R42Q7Z4L9 355 aa4.51□□□□□ -1.69
RNF38-203ENST00000353739 KIF2CQ99661 725 aa4.51□□□□□ -1.69
RNF38-203ENST00000353739 DIAPH3Q9NSV4 1193 aa4.51□□□□□ -1.69
RNF38-203ENST00000353739 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.51□□□□□ -1.69
RNF38-203ENST00000353739 C5P01031 1676 aa4.51□□□□□ -1.69
RNF38-203ENST00000353739 ADCY9O60503 1353 aa4.51□□□□□ -1.69
RNF38-203ENST00000353739 SMARCA5O60264 1052 aaPredicted RBP4.51□□□□□ -1.69
RNF38-203ENST00000353739 PSMA5P28066 241 aa4.51□□□□□ -1.69
RNF38-203ENST00000353739 LRRFIP1Q32MZ4 808 aaKnown RBP4.51□□□□□ -1.69
RNF38-203ENST00000353739 RNF20Q5VTR2 975 aa4.51□□□□□ -1.69
RNF38-203ENST00000353739 LMOD2Q6P5Q4 547 aa4.51□□□□□ -1.69
RNF38-203ENST00000353739 RILPL2Q969X0 211 aa4.51□□□□□ -1.69
RNF38-203ENST00000353739 MAP3K2Q9Y2U5 619 aa4.51□□□□□ -1.69
RNF38-203ENST00000353739 PRKCSHP14314 528 aaPredicted RBP4.5□□□□□ -1.69
RNF38-203ENST00000353739 PHKG2P15735 406 aa4.5□□□□□ -1.69
RNF38-203ENST00000353739 RIC3Q7Z5B4 369 aa4.5□□□□□ -1.69
RNF38-203ENST00000353739 ABCA3Q99758 1704 aa4.5□□□□□ -1.69
RNF38-203ENST00000353739 LETM1O95202 739 aaPredicted RBP4.5□□□□□ -1.69
RNF38-203ENST00000353739 ANKRD1Q15327 319 aa4.5□□□□□ -1.69
RNF38-203ENST00000353739 KLHL40Q2TBA0 621 aa4.5□□□□□ -1.69
RNF38-203ENST00000353739 EXOC6BQ9Y2D4 811 aa4.5□□□□□ -1.69
RNF38-203ENST00000353739 PLCH1Q4KWH8 1693 aa4.5□□□□□ -1.69
RNF38-203ENST00000353739 PI4KAP2A4QPH2 592 aa4.5□□□□□ -1.69
RNF38-203ENST00000353739 ERVV-2B6SEH9 535 aa4.5□□□□□ -1.69
RNF38-203ENST00000353739 APBB1O00213 710 aa4.5□□□□□ -1.69
RNF38-203ENST00000353739 GRM8O00222 908 aa4.5□□□□□ -1.69
RNF38-203ENST00000353739 MPRIPQ6WCQ1 1025 aa4.5□□□□□ -1.69
RNF38-203ENST00000353739 PI4KAP1Q8N8J0 262 aa4.5□□□□□ -1.69
RNF38-203ENST00000353739 SH2B1Q9NRF2 756 aaPredicted RBP4.5□□□□□ -1.69
RNF38-203ENST00000353739 ECHDC1Q9NTX5 307 aa4.5□□□□□ -1.69
RNF38-203ENST00000353739 NLRP2Q9NX02 1062 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms