RNA–Protein interactions for RNA: ENST00000350721.8

ATR-201, Transcript of ATR serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATR, Length 8,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATR-201ENST00000350721 TTC41PQ6P2S7 1318 aa8.9□□□□□ -0.99
ATR-201ENST00000350721 ASXL2Q76L83 1435 aa8.9□□□□□ -0.99
ATR-201ENST00000350721 ZNF518AQ6AHZ1 1483 aa8.9□□□□□ -0.99
ATR-201ENST00000350721 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.89□□□□□ -0.99
ATR-201ENST00000350721 E9PCH4 1651 aa8.89□□□□□ -0.99
ATR-201ENST00000350721 BRD1O95696 1058 aa8.89□□□□□ -0.99
ATR-201ENST00000350721 MAP9Q49MG5 647 aa8.89□□□□□ -0.99
ATR-201ENST00000350721 EIF2S2P20042 333 aaKnown RBP8.89□□□□□ -0.99
ATR-201ENST00000350721 ZNF397Q8NF99 534 aaPredicted RBP8.89□□□□□ -0.99
ATR-201ENST00000350721 RBSNQ9H1K0 784 aa8.89□□□□□ -0.99
ATR-201ENST00000350721 FLIIQ13045 1269 aa8.89□□□□□ -0.99
ATR-201ENST00000350721 USP48Q86UV5 1035 aa8.89□□□□□ -0.99
ATR-201ENST00000350721 TCHHQ07283 1943 aa8.89□□□□□ -0.99
ATR-201ENST00000350721 F13A1P00488 732 aa8.89□□□□□ -0.99
ATR-201ENST00000350721 SERPINC1P01008 464 aa8.89□□□□□ -0.99
ATR-201ENST00000350721 CWC27Q6UX04 472 aaKnown RBP8.89□□□□□ -0.99
ATR-201ENST00000350721 FMNL2Q96PY5 1086 aa8.89□□□□□ -0.99
ATR-201ENST00000350721 BABAM1Q9NWV8 329 aa8.89□□□□□ -0.99
ATR-201ENST00000350721 PIK3R4Q99570 1358 aa8.88□□□□□ -0.99
ATR-201ENST00000350721 SLU7O95391 586 aaKnown RBP8.88□□□□□ -0.99
ATR-201ENST00000350721 CEP135Q66GS9 1140 aa8.88□□□□□ -0.99
ATR-201ENST00000350721 TTC12Q9H892 705 aaPredicted RBP8.88□□□□□ -0.99
ATR-201ENST00000350721 SART3Q15020 963 aaKnown RBP8.88□□□□□ -0.99
ATR-201ENST00000350721 LMOD2Q6P5Q4 547 aa8.88□□□□□ -0.99
ATR-201ENST00000350721 KIAA1210Q9ULL0 1709 aa8.88□□□□□ -0.99
ATR-201ENST00000350721 CACNA1FO60840 1977 aa8.88□□□□□ -0.99
ATR-201ENST00000350721 VPS53Q5VIR6 699 aa8.88□□□□□ -0.99
ATR-201ENST00000350721 PDLIM2Q96JY6 352 aa8.88□□□□□ -0.99
ATR-201ENST00000350721 NOC3LQ8WTT2 800 aaKnown RBP8.88□□□□□ -0.99
ATR-201ENST00000350721 ARFGAP3Q9NP61 516 aa8.88□□□□□ -0.99
ATR-201ENST00000350721 RBM27Q9P2N5 1060 aaKnown RBP8.88□□□□□ -0.99
ATR-201ENST00000350721 IVLP07476 585 aa8.88□□□□□ -0.99
ATR-201ENST00000350721 CEP85Q6P2H3 762 aa8.88□□□□□ -0.99
ATR-201ENST00000350721 LUC7LQ9NQ29 371 aaKnown RBP8.88□□□□□ -0.99
ATR-201ENST00000350721 KIAA0232Q92628 1395 aa8.88□□□□□ -0.99
ATR-201ENST00000350721 ABCC4O15439 1325 aa8.88□□□□□ -0.99
ATR-201ENST00000350721 FAM135BQ49AJ0 1406 aa8.88□□□□□ -0.99
ATR-201ENST00000350721 TTC5Q8N0Z6 440 aa8.87□□□□□ -0.99
ATR-201ENST00000350721 TET3O43151 1660 aa8.87□□□□□ -0.99
ATR-201ENST00000350721 ABCA8O94911 1581 aa8.87□□□□□ -0.99
ATR-201ENST00000350721 RAD50Q92878 1312 aa8.87□□□□□ -0.99
ATR-201ENST00000350721 GNAT3A8MTJ3 354 aa8.87□□□□□ -0.99
ATR-201ENST00000350721 SNW1Q13573 536 aaKnown RBP8.87□□□□□ -0.99
ATR-201ENST00000350721 SYCP1Q15431 976 aa8.87□□□□□ -0.99
ATR-201ENST00000350721 PLEKHO1Q53GL0 409 aaPredicted RBP8.87□□□□□ -0.99
ATR-201ENST00000350721 RASSF8Q8NHQ8 419 aa8.87□□□□□ -0.99
ATR-201ENST00000350721 TM6SF1Q9BZW5 370 aa8.87□□□□□ -0.99
ATR-201ENST00000350721 ELP1O95163 1332 aa8.87□□□□□ -0.99
ATR-201ENST00000350721 TYRO3Q06418 890 aa8.87□□□□□ -0.99
ATR-201ENST00000350721 TAF7Q15545 349 aaPredicted RBP8.87□□□□□ -0.99
ATR-201ENST00000350721 PPFIBP1Q86W92 1011 aa8.87□□□□□ -0.99
ATR-201ENST00000350721 CCDC83Q8IWF9 413 aa8.87□□□□□ -0.99
ATR-201ENST00000350721 ERO1AQ96HE7 468 aa8.87□□□□□ -0.99
ATR-201ENST00000350721 RBM42Q9BTD8 480 aaKnown RBP8.87□□□□□ -0.99
ATR-201ENST00000350721 OSBPL3Q9H4L5 887 aa8.86□□□□□ -0.99
ATR-201ENST00000350721 BRMS1Q9HCU9 246 aa8.86□□□□□ -0.99
ATR-201ENST00000350721 ZHX1Q9UKY1 873 aaPredicted RBP8.86□□□□□ -0.99
ATR-201ENST00000350721 DCTN1Q14203 1278 aa8.86□□□□□ -0.99
ATR-201ENST00000350721 SKILP12757 684 aa8.86□□□□□ -0.99
ATR-201ENST00000350721 NLRP6P59044 892 aa8.86□□□□□ -0.99
ATR-201ENST00000350721 ATP8B2P98198 1209 aa8.86□□□□□ -0.99
ATR-201ENST00000350721 GAS2L3Q86XJ1 694 aa8.86□□□□□ -0.99
ATR-201ENST00000350721 ERICH2A1L162 156 aa8.86□□□□□ -0.99
ATR-201ENST00000350721 RIC3Q7Z5B4 369 aa8.86□□□□□ -0.99
ATR-201ENST00000350721 TRIM35Q9UPQ4 493 aa8.86□□□□□ -0.99
ATR-201ENST00000350721 TRIM22Q8IYM9 498 aa8.86□□□□□ -0.99
ATR-201ENST00000350721 NUDT16Q96DE0 195 aaKnown RBP8.86□□□□□ -0.99
ATR-201ENST00000350721 THUMPD2Q9BTF0 503 aaKnown RBP8.86□□□□□ -0.99
ATR-201ENST00000350721 GJB2P29033 226 aa8.85□□□□□ -0.99
ATR-201ENST00000350721 SPHKAPQ2M3C7 1700 aa8.85□□□□□ -0.99
ATR-201ENST00000350721 CFAP100Q494V2 611 aa8.85□□□□□ -0.99
ATR-201ENST00000350721 ATP7AQ04656 1500 aa8.85□□□□□ -0.99
ATR-201ENST00000350721 CHMLP26374 656 aa8.85□□□□□ -0.99
ATR-201ENST00000350721 KCNG4Q8TDN1 519 aa8.85□□□□□ -0.99
ATR-201ENST00000350721 WASF1Q92558 559 aa8.85□□□□□ -0.99
ATR-201ENST00000350721 ZNHIT6Q9NWK9 470 aaKnown RBP8.85□□□□□ -0.99
ATR-201ENST00000350721 AACSQ86V21 672 aa8.85□□□□□ -0.99
ATR-201ENST00000350721 ZGPATQ8N5A5 531 aaKnown RBP8.85□□□□□ -0.99
ATR-201ENST00000350721 TMEM63CQ9P1W3 806 aa8.85□□□□□ -0.99
ATR-201ENST00000350721 H0YHG0 523 aa8.85□□□□□ -0.99
ATR-201ENST00000350721 WASLO00401 505 aaPredicted RBP8.85□□□□□ -0.99
ATR-201ENST00000350721 SYT1P21579 422 aa8.85□□□□□ -0.99
ATR-201ENST00000350721 CCDC186Q7Z3E2 898 aa8.85□□□□□ -0.99
ATR-201ENST00000350721 IL1RAPL2Q9NP60 686 aa8.85□□□□□ -0.99
ATR-201ENST00000350721 ERVK-7P63135 1459 aa8.85□□□□□ -0.99
ATR-201ENST00000350721 GDPD2Q9HCC8 539 aa8.85□□□□□ -0.99
ATR-201ENST00000350721 DBF4Q9UBU7 674 aaPredicted RBP8.85□□□□□ -0.99
ATR-201ENST00000350721 A0A1W2PP64 1363 aa8.85□□□□□ -0.99
ATR-201ENST00000350721 IDI1Q13907 227 aa8.85□□□□□ -0.99
ATR-201ENST00000350721 MLECQ14165 292 aa8.85□□□□□ -0.99
ATR-201ENST00000350721 ARHGAP29Q52LW3 1261 aa8.85□□□□□ -0.99
ATR-201ENST00000350721 GIMAP6Q6P9H5 292 aa8.85□□□□□ -0.99
ATR-201ENST00000350721 MEIS3Q99687 375 aa8.85□□□□□ -0.99
ATR-201ENST00000350721 LRRFIP2Q9Y608 721 aaKnown RBP8.85□□□□□ -0.99
ATR-201ENST00000350721 TXLNAP40222 546 aa8.84□□□□□ -0.99
ATR-201ENST00000350721 DNAAF4Q8WXU2 420 aa8.84□□□□□ -0.99
ATR-201ENST00000350721 IMPACTQ9P2X3 320 aa8.84□□□□□ -0.99
ATR-201ENST00000350721 MYO1BO43795 1136 aa8.84□□□□□ -0.99
ATR-201ENST00000350721 FERMT3Q86UX7 667 aa8.84□□□□□ -0.99
ATR-201ENST00000350721 LTV1Q96GA3 475 aaPredicted RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms