RNA–Protein interactions for RNA: ENST00000350498.7

PDAP1-201, Transcript of PDGFA associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDAP1, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-201ENST00000350498 KCNH5Q8NCM2 988 aa20.3■□□□□ 0.84
PDAP1-201ENST00000350498 AKAP4Q5JQC9 854 aa20.29■□□□□ 0.84
PDAP1-201ENST00000350498 SSH3Q8TE77 659 aa20.29■□□□□ 0.84
PDAP1-201ENST00000350498 DNAAF4Q8WXU2 420 aa20.29■□□□□ 0.84
PDAP1-201ENST00000350498 CWF19L2Q2TBE0 894 aaKnown RBP20.29■□□□□ 0.84
PDAP1-201ENST00000350498 ADCY9O60503 1353 aa20.29■□□□□ 0.84
PDAP1-201ENST00000350498 REC8O95072 547 aa20.28■□□□□ 0.84
PDAP1-201ENST00000350498 NEK4P51957 841 aa20.28■□□□□ 0.84
PDAP1-201ENST00000350498 SLC39A6Q13433 755 aa20.28■□□□□ 0.84
PDAP1-201ENST00000350498 KRT28Q7Z3Y7 464 aa20.28■□□□□ 0.84
PDAP1-201ENST00000350498 ANO2Q9NQ90 1003 aa20.28■□□□□ 0.84
PDAP1-201ENST00000350498 SKOR2Q2VWA4 1001 aaPredicted RBP20.28■□□□□ 0.84
PDAP1-201ENST00000350498 PLEKHO1Q53GL0 409 aaPredicted RBP20.28■□□□□ 0.84
PDAP1-201ENST00000350498 PROSER2Q86WR7 435 aaPredicted RBP20.28■□□□□ 0.84
PDAP1-201ENST00000350498 CABLES1Q8TDN4 633 aa20.28■□□□□ 0.84
PDAP1-201ENST00000350498 CAVIN1Q6NZI2 390 aaKnown RBP20.27■□□□□ 0.84
PDAP1-201ENST00000350498 AIMP1Q12904 312 aaKnown RBP20.27■□□□□ 0.84
PDAP1-201ENST00000350498 TRIM44Q96DX7 344 aaPredicted RBP20.27■□□□□ 0.84
PDAP1-201ENST00000350498 BABAM1Q9NWV8 329 aa20.27■□□□□ 0.84
PDAP1-201ENST00000350498 PA2G4Q9UQ80 394 aaKnown RBP20.27■□□□□ 0.84
PDAP1-201ENST00000350498 DTNBO60941 627 aa20.26■□□□□ 0.83
PDAP1-201ENST00000350498 PIP4K2AP48426 406 aaPredicted RBP20.26■□□□□ 0.83
PDAP1-201ENST00000350498 RHPN1Q8TCX5 695 aa20.26■□□□□ 0.83
PDAP1-201ENST00000350498 RBM27Q9P2N5 1060 aaKnown RBP20.26■□□□□ 0.83
PDAP1-201ENST00000350498 MAP3K2Q9Y2U5 619 aa20.26■□□□□ 0.83
PDAP1-201ENST00000350498 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.26■□□□□ 0.83
PDAP1-201ENST00000350498 NPHP4O75161 1426 aaPredicted RBP20.26■□□□□ 0.83
PDAP1-201ENST00000350498 CACNA1FO60840 1977 aa20.26■□□□□ 0.83
PDAP1-201ENST00000350498 C1orf141Q5JVX7 400 aa20.26■□□□□ 0.83
PDAP1-201ENST00000350498 UPF3BQ9BZI7 483 aaKnown RBP20.26■□□□□ 0.83
PDAP1-201ENST00000350498 ZDHHC9Q9Y397 364 aa20.26■□□□□ 0.83
PDAP1-201ENST00000350498 TUBGCP6Q96RT7 1819 aa20.26■□□□□ 0.83
PDAP1-201ENST00000350498 POLA2Q14181 598 aa20.25■□□□□ 0.83
PDAP1-201ENST00000350498 MED1Q15648 1581 aaPredicted RBP20.25■□□□□ 0.83
PDAP1-201ENST00000350498 RGPD5Q99666 1765 aa20.25■□□□□ 0.83
PDAP1-201ENST00000350498 GIGYF1O75420 1035 aaPredicted RBP20.25■□□□□ 0.83
PDAP1-201ENST00000350498 KLHL40Q2TBA0 621 aa20.25■□□□□ 0.83
PDAP1-201ENST00000350498 GOLGA6L22H0YM25 854 aa20.24■□□□□ 0.83
PDAP1-201ENST00000350498 NASPP49321 788 aaPredicted RBP20.24■□□□□ 0.83
PDAP1-201ENST00000350498 LMBRD1Q9NUN5 540 aa20.24■□□□□ 0.83
PDAP1-201ENST00000350498 STAP2Q9UGK3 403 aa20.24■□□□□ 0.83
PDAP1-201ENST00000350498 KDM3BQ7LBC6 1761 aa20.24■□□□□ 0.83
PDAP1-201ENST00000350498 CYP2E1P05181 493 aaPredicted RBP20.24■□□□□ 0.83
PDAP1-201ENST00000350498 PRPF40AO75400 957 aaKnown RBP20.23■□□□□ 0.83
PDAP1-201ENST00000350498 PI4K2BQ8TCG2 481 aa20.23■□□□□ 0.83
PDAP1-201ENST00000350498 LARP6Q9BRS8 491 aaKnown RBP20.23■□□□□ 0.83
PDAP1-201ENST00000350498 ST18O60284 1047 aa20.23■□□□□ 0.83
PDAP1-201ENST00000350498 NSFL1CQ9UNZ2 370 aaKnown RBP20.23■□□□□ 0.83
PDAP1-201ENST00000350498 CLEC17AQ6ZS10 378 aa20.22■□□□□ 0.83
PDAP1-201ENST00000350498 ISY1Q9ULR0 285 aaKnown RBP20.22■□□□□ 0.83
PDAP1-201ENST00000350498 JARID2Q92833 1246 aaPredicted RBP20.22■□□□□ 0.83
PDAP1-201ENST00000350498 CHRNA2Q15822 529 aa20.21■□□□□ 0.83
PDAP1-201ENST00000350498 TMX3Q96JJ7 454 aa20.21■□□□□ 0.83
PDAP1-201ENST00000350498 ZSCAN23Q3MJ62 389 aa20.21■□□□□ 0.83
PDAP1-201ENST00000350498 GPT2Q8TD30 523 aa20.21■□□□□ 0.83
PDAP1-201ENST00000350498 NLRP2Q9NX02 1062 aa20.2■□□□□ 0.82
PDAP1-201ENST00000350498 DBF4Q9UBU7 674 aaPredicted RBP20.2■□□□□ 0.82
PDAP1-201ENST00000350498 PXDNLA1KZ92 1463 aa20.2■□□□□ 0.82
PDAP1-201ENST00000350498 MYL6BP14649 208 aa20.2■□□□□ 0.82
PDAP1-201ENST00000350498 FOXD4L6Q3SYB3 417 aaPredicted RBP20.2■□□□□ 0.82
PDAP1-201ENST00000350498 FOXD4L3Q6VB84 417 aaPredicted RBP20.2■□□□□ 0.82
PDAP1-201ENST00000350498 LMO7Q8WWI1 1683 aa20.19■□□□□ 0.82
PDAP1-201ENST00000350498 AMOTQ4VCS5 1084 aa20.19■□□□□ 0.82
PDAP1-201ENST00000350498 C9orf78Q9NZ63 289 aaPredicted RBP20.19■□□□□ 0.82
PDAP1-201ENST00000350498 ZNF142P52746 1687 aaPredicted RBP20.19■□□□□ 0.82
PDAP1-201ENST00000350498 NUCB2P80303 420 aa20.19■□□□□ 0.82
PDAP1-201ENST00000350498 OS9Q13438 667 aaPredicted RBP20.19■□□□□ 0.82
PDAP1-201ENST00000350498 RBSNQ9H1K0 784 aa20.19■□□□□ 0.82
PDAP1-201ENST00000350498 NFATC2IPQ8NCF5 419 aa20.18■□□□□ 0.82
PDAP1-201ENST00000350498 KLHDC4Q8TBB5 520 aa20.18■□□□□ 0.82
PDAP1-201ENST00000350498 SPG7Q9UQ90 795 aa20.18■□□□□ 0.82
PDAP1-201ENST00000350498 PRIM1P49642 420 aaKnown RBP20.18■□□□□ 0.82
PDAP1-201ENST00000350498 KAZALD1Q96I82 304 aa20.18■□□□□ 0.82
PDAP1-201ENST00000350498 N4BP2Q86UW6 1770 aaPredicted RBP20.18■□□□□ 0.82
PDAP1-201ENST00000350498 ERBB3P21860 1342 aa20.17■□□□□ 0.82
PDAP1-201ENST00000350498 PDIA6Q15084 440 aa20.17■□□□□ 0.82
PDAP1-201ENST00000350498 CPA1P15085 419 aa20.17■□□□□ 0.82
PDAP1-201ENST00000350498 CWC27Q6UX04 472 aaKnown RBP20.17■□□□□ 0.82
PDAP1-201ENST00000350498 ADAMTSL3P82987 1691 aa20.16■□□□□ 0.82
PDAP1-201ENST00000350498 HOXB7P09629 217 aa20.16■□□□□ 0.82
PDAP1-201ENST00000350498 KIF1BPQ96EK5 621 aa20.16■□□□□ 0.82
PDAP1-201ENST00000350498 SUCLG2Q96I99 432 aa20.16■□□□□ 0.82
PDAP1-201ENST00000350498 C1orf167Q5SNV9 1468 aa20.16■□□□□ 0.82
PDAP1-201ENST00000350498 PTMSP20962 102 aa20.16■□□□□ 0.82
PDAP1-201ENST00000350498 KSR2Q6VAB6 950 aa20.16■□□□□ 0.82
PDAP1-201ENST00000350498 SLIT3O75094 1523 aa20.15■□□□□ 0.82
PDAP1-201ENST00000350498 RASEFQ8IZ41 740 aa20.15■□□□□ 0.82
PDAP1-201ENST00000350498 DDX54Q8TDD1 881 aaKnown RBP20.15■□□□□ 0.82
PDAP1-201ENST00000350498 RAB11FIP3O75154 756 aa20.15■□□□□ 0.82
PDAP1-201ENST00000350498 SIL1Q9H173 461 aa20.15■□□□□ 0.82
PDAP1-201ENST00000350498 TMEM63CQ9P1W3 806 aa20.14■□□□□ 0.82
PDAP1-201ENST00000350498 HEG1Q9ULI3 1381 aa20.14■□□□□ 0.81
PDAP1-201ENST00000350498 CCDC173Q0VFZ6 552 aa20.14■□□□□ 0.81
PDAP1-201ENST00000350498 BICC1Q9H694 974 aaKnown RBP20.14■□□□□ 0.81
PDAP1-201ENST00000350498 TRPM3Q9HCF6 1732 aaPredicted RBP20.14■□□□□ 0.81
PDAP1-201ENST00000350498 PPP1R9BQ96SB3 815 aa20.13■□□□□ 0.81
PDAP1-201ENST00000350498 C19orf44Q9H6X5 657 aa20.13■□□□□ 0.81
PDAP1-201ENST00000350498 IGKV5-2P06315 115 aa20.13■□□□□ 0.81
PDAP1-201ENST00000350498 COL9A3Q14050 684 aaPredicted RBP20.13■□□□□ 0.81
PDAP1-201ENST00000350498 ZNF445P59923 1031 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms