RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 CIZ1Q9ULV3 898 aaPredicted RBP14.59□□□□□ -0.07
SMAD9-201ENST00000350148 FOXD4L1Q9NU39 408 aa14.59□□□□□ -0.07
SMAD9-201ENST00000350148 FRMPD1Q5SYB0 1578 aa14.58□□□□□ -0.08
SMAD9-201ENST00000350148 PI4KAP2A4QPH2 592 aa14.58□□□□□ -0.08
SMAD9-201ENST00000350148 ADAMTS2O95450 1211 aa14.58□□□□□ -0.08
SMAD9-201ENST00000350148 PI4KAP1Q8N8J0 262 aa14.58□□□□□ -0.08
SMAD9-201ENST00000350148 PLEKHF1Q96S99 279 aa14.58□□□□□ -0.08
SMAD9-201ENST00000350148 PRR36Q9H6K5 1346 aa14.58□□□□□ -0.08
SMAD9-201ENST00000350148 CPLX1O14810 134 aa14.58□□□□□ -0.08
SMAD9-201ENST00000350148 IGHMBP2P38935 993 aaKnown RBP14.58□□□□□ -0.08
SMAD9-201ENST00000350148 ANKRD13DQ6ZTN6 518 aa14.58□□□□□ -0.08
SMAD9-201ENST00000350148 PDCP20941 246 aa14.58□□□□□ -0.08
SMAD9-201ENST00000350148 TRIM29Q14134 588 aa14.58□□□□□ -0.08
SMAD9-201ENST00000350148 DNAJC2Q99543 621 aaKnown RBP14.58□□□□□ -0.08
SMAD9-201ENST00000350148 CTNNA3Q9UI47 895 aa14.58□□□□□ -0.08
SMAD9-201ENST00000350148 ADGRL3Q9HAR2 1447 aa14.57□□□□□ -0.08
SMAD9-201ENST00000350148 EXOC6BQ9Y2D4 811 aa14.57□□□□□ -0.08
SMAD9-201ENST00000350148 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.57□□□□□ -0.08
SMAD9-201ENST00000350148 CDC42BPGQ6DT37 1551 aa14.57□□□□□ -0.08
SMAD9-201ENST00000350148 ATP8B2P98198 1209 aa14.57□□□□□ -0.08
SMAD9-201ENST00000350148 LINS1Q8NG48 757 aa14.57□□□□□ -0.08
SMAD9-201ENST00000350148 ZBTB40Q9NUA8 1239 aa14.56□□□□□ -0.08
SMAD9-201ENST00000350148 ZNF521Q96K83 1311 aa14.56□□□□□ -0.08
SMAD9-201ENST00000350148 CHPF2Q9P2E5 772 aa14.56□□□□□ -0.08
SMAD9-201ENST00000350148 ZSCAN31Q96LW9 406 aaPredicted RBP14.56□□□□□ -0.08
SMAD9-201ENST00000350148 ISY1Q9ULR0 285 aaKnown RBP14.56□□□□□ -0.08
SMAD9-201ENST00000350148 IGSF1Q8N6C5 1336 aa14.56□□□□□ -0.08
SMAD9-201ENST00000350148 SF3A1Q15459 793 aaKnown RBP14.56□□□□□ -0.08
SMAD9-201ENST00000350148 SART3Q15020 963 aaKnown RBP14.56□□□□□ -0.08
SMAD9-201ENST00000350148 SIL1Q9H173 461 aa14.56□□□□□ -0.08
SMAD9-201ENST00000350148 PTPRMP28827 1452 aa14.55□□□□□ -0.08
SMAD9-201ENST00000350148 DIP2AQ14689 1571 aa14.55□□□□□ -0.08
SMAD9-201ENST00000350148 SLC3A2P08195 630 aaKnown RBP14.55□□□□□ -0.08
SMAD9-201ENST00000350148 CYP46A1Q9Y6A2 500 aa14.55□□□□□ -0.08
SMAD9-201ENST00000350148 DHX16O60231 1041 aaKnown RBP14.55□□□□□ -0.08
SMAD9-201ENST00000350148 IGHDP01880 384 aa14.55□□□□□ -0.08
SMAD9-201ENST00000350148 DDX49Q9Y6V7 483 aaKnown RBP14.55□□□□□ -0.08
SMAD9-201ENST00000350148 UBAP1LF5GYI3 381 aa14.55□□□□□ -0.08
SMAD9-201ENST00000350148 K7ELQ4 463 aaPredicted RBP14.55□□□□□ -0.08
SMAD9-201ENST00000350148 BRPF1P55201 1214 aaPredicted RBP14.55□□□□□ -0.08
SMAD9-201ENST00000350148 DDX21Q9NR30 783 aaKnown RBP eCLIP14.55□□□□□ -0.08
SMAD9-201ENST00000350148 NEK4P51957 841 aa14.54□□□□□ -0.08
SMAD9-201ENST00000350148 IFIT5Q13325 482 aaKnown RBP14.54□□□□□ -0.08
SMAD9-201ENST00000350148 NACAP1Q9BZK3 213 aa14.54□□□□□ -0.08
SMAD9-201ENST00000350148 SPINK5Q9NQ38 1064 aaPredicted RBP14.54□□□□□ -0.08
SMAD9-201ENST00000350148 USP31Q70CQ4 1352 aa14.54□□□□□ -0.08
SMAD9-201ENST00000350148 SMC5Q8IY18 1101 aa14.54□□□□□ -0.08
SMAD9-201ENST00000350148 IL1RAPL2Q9NP60 686 aa14.54□□□□□ -0.08
SMAD9-201ENST00000350148 TAOK2Q9UL54 1235 aa14.54□□□□□ -0.08
SMAD9-201ENST00000350148 PCDHB15Q9Y5E8 787 aa14.54□□□□□ -0.08
SMAD9-201ENST00000350148 TSPYL6Q8N831 410 aa14.54□□□□□ -0.08
SMAD9-201ENST00000350148 TECPR2O15040 1411 aa14.53□□□□□ -0.08
SMAD9-201ENST00000350148 PLCB2Q00722 1185 aa14.53□□□□□ -0.08
SMAD9-201ENST00000350148 ANKRD18BA2A2Z9 1011 aa14.53□□□□□ -0.08
SMAD9-201ENST00000350148 DDB1Q16531 1140 aa14.53□□□□□ -0.08
SMAD9-201ENST00000350148 PPP1R42Q7Z4L9 355 aa14.53□□□□□ -0.08
SMAD9-201ENST00000350148 DCTPP1Q9H773 170 aa14.53□□□□□ -0.08
SMAD9-201ENST00000350148 ECHDC1Q9NTX5 307 aa14.53□□□□□ -0.08
SMAD9-201ENST00000350148 ZPR1O75312 459 aa14.53□□□□□ -0.08
SMAD9-201ENST00000350148 RICTORQ6R327 1708 aa14.53□□□□□ -0.08
SMAD9-201ENST00000350148 GRM8O00222 908 aa14.52□□□□□ -0.08
SMAD9-201ENST00000350148 EVI5LQ96CN4 794 aa14.52□□□□□ -0.08
SMAD9-201ENST00000350148 TTC22Q5TAA0 569 aa14.52□□□□□ -0.08
SMAD9-201ENST00000350148 TRIM34Q9BYJ4 488 aa14.52□□□□□ -0.08
SMAD9-201ENST00000350148 NFXL1Q6ZNB6 911 aa14.52□□□□□ -0.09
SMAD9-201ENST00000350148 ARHGEF25Q86VW2 580 aa14.52□□□□□ -0.09
SMAD9-201ENST00000350148 CABLES1Q8TDN4 633 aa14.52□□□□□ -0.09
SMAD9-201ENST00000350148 IFIT1P09914 478 aaKnown RBP14.52□□□□□ -0.09
SMAD9-201ENST00000350148 SF3B2Q13435 895 aaKnown RBP14.52□□□□□ -0.09
SMAD9-201ENST00000350148 XAGE3Q8WTP9 111 aa14.52□□□□□ -0.09
SMAD9-201ENST00000350148 NBPF6Q5VWK0 638 aa14.52□□□□□ -0.09
SMAD9-201ENST00000350148 NBPF4Q96M43 638 aa14.52□□□□□ -0.09
SMAD9-201ENST00000350148 METTL24Q5JXM2 366 aa14.51□□□□□ -0.09
SMAD9-201ENST00000350148 MEIS3Q99687 375 aa14.51□□□□□ -0.09
SMAD9-201ENST00000350148 SLC52A2Q9HAB3 445 aa14.51□□□□□ -0.09
SMAD9-201ENST00000350148 TRMT112Q9UI30 125 aaKnown RBP14.51□□□□□ -0.09
SMAD9-201ENST00000350148 PPLO60437 1756 aa14.51□□□□□ -0.09
SMAD9-201ENST00000350148 ERVV-2B6SEH9 535 aa14.51□□□□□ -0.09
SMAD9-201ENST00000350148 SAFBQ15424 915 aaKnown RBP eCLIP14.51□□□□□ -0.09
SMAD9-201ENST00000350148 MROH1Q8NDA8 1641 aa14.51□□□□□ -0.09
SMAD9-201ENST00000350148 CPSF1Q10570 1443 aaKnown RBP14.5□□□□□ -0.09
SMAD9-201ENST00000350148 NUTM1Q86Y26 1132 aa14.5□□□□□ -0.09
SMAD9-201ENST00000350148 ADGRB1O14514 1584 aa14.5□□□□□ -0.09
SMAD9-201ENST00000350148 ZNF790Q6PG37 636 aa14.5□□□□□ -0.09
SMAD9-201ENST00000350148 COPS6Q7L5N1 327 aa14.5□□□□□ -0.09
SMAD9-201ENST00000350148 NFATC2IPQ8NCF5 419 aa14.5□□□□□ -0.09
SMAD9-201ENST00000350148 ZBTB7BO15156 539 aaPredicted RBP14.5□□□□□ -0.09
SMAD9-201ENST00000350148 FAM177BA6PVY3 158 aa14.5□□□□□ -0.09
SMAD9-201ENST00000350148 ERBB4Q15303 1308 aa14.49□□□□□ -0.09
SMAD9-201ENST00000350148 XBP1P17861 261 aa14.49□□□□□ -0.09
SMAD9-201ENST00000350148 TMEM131LA2VDJ0 1609 aa14.49□□□□□ -0.09
SMAD9-201ENST00000350148 CEP85Q6P2H3 762 aa14.49□□□□□ -0.09
SMAD9-201ENST00000350148 ZNF771Q7L3S4 317 aaPredicted RBP14.49□□□□□ -0.09
SMAD9-201ENST00000350148 RHPN1Q8TCX5 695 aa14.49□□□□□ -0.09
SMAD9-201ENST00000350148 PNPLA6Q8IY17 1366 aa14.49□□□□□ -0.09
SMAD9-201ENST00000350148 RLBP1P12271 317 aa14.49□□□□□ -0.09
SMAD9-201ENST00000350148 SLC5A1P13866 664 aa14.49□□□□□ -0.09
SMAD9-201ENST00000350148 MBD3O95983 291 aa14.48□□□□□ -0.09
SMAD9-201ENST00000350148 CDC5LQ99459 802 aaKnown RBP14.48□□□□□ -0.09
SMAD9-201ENST00000350148 TTC41PQ6P2S7 1318 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms