RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 JAKMIP1Q96N16 626 aaKnown RBP12.91□□□□□ -0.34
SMARCE1-202ENST00000348513 ABCF2Q9UG63 623 aa12.91□□□□□ -0.34
SMARCE1-202ENST00000348513 MPRIPQ6WCQ1 1025 aa12.91□□□□□ -0.34
SMARCE1-202ENST00000348513 EMILIN1Q9Y6C2 1016 aa12.91□□□□□ -0.34
SMARCE1-202ENST00000348513 PTPN14Q15678 1187 aa12.91□□□□□ -0.34
SMARCE1-202ENST00000348513 TRIM22Q8IYM9 498 aa12.9□□□□□ -0.34
SMARCE1-202ENST00000348513 MYD88Q99836 296 aa12.9□□□□□ -0.34
SMARCE1-202ENST00000348513 TMOD3Q9NYL9 352 aa12.9□□□□□ -0.34
SMARCE1-202ENST00000348513 MAGEC2Q9UBF1 373 aaPredicted RBP12.9□□□□□ -0.34
SMARCE1-202ENST00000348513 KIF1CO43896 1103 aaKnown RBP12.9□□□□□ -0.34
SMARCE1-202ENST00000348513 ME1P48163 572 aa12.9□□□□□ -0.34
SMARCE1-202ENST00000348513 CLNS1AP54105 237 aaKnown RBP12.9□□□□□ -0.34
SMARCE1-202ENST00000348513 IGHMBP2P38935 993 aaKnown RBP12.9□□□□□ -0.34
SMARCE1-202ENST00000348513 MCM2P49736 904 aa12.9□□□□□ -0.34
SMARCE1-202ENST00000348513 MAGI1Q96QZ7 1491 aaPredicted RBP12.9□□□□□ -0.34
SMARCE1-202ENST00000348513 STARD3NLO95772 234 aa12.9□□□□□ -0.34
SMARCE1-202ENST00000348513 KIF18AQ8NI77 898 aa12.9□□□□□ -0.34
SMARCE1-202ENST00000348513 ZKSCAN5Q9Y2L8 839 aa12.9□□□□□ -0.34
SMARCE1-202ENST00000348513 CAMSAP2Q08AD1 1489 aa12.9□□□□□ -0.34
SMARCE1-202ENST00000348513 KCNH5Q8NCM2 988 aa12.89□□□□□ -0.35
SMARCE1-202ENST00000348513 CCDC141Q6ZP82 1450 aa12.89□□□□□ -0.35
SMARCE1-202ENST00000348513 METTL24Q5JXM2 366 aa12.89□□□□□ -0.35
SMARCE1-202ENST00000348513 PDRG1Q9NUG6 133 aa12.89□□□□□ -0.35
SMARCE1-202ENST00000348513 PCF11O94913 1555 aaKnown RBP12.89□□□□□ -0.35
SMARCE1-202ENST00000348513 ZSCAN25Q6NSZ9 544 aa12.89□□□□□ -0.35
SMARCE1-202ENST00000348513 PPP2R5AQ15172 486 aa12.89□□□□□ -0.35
SMARCE1-202ENST00000348513 AMOTL2Q9Y2J4 779 aa12.89□□□□□ -0.35
SMARCE1-202ENST00000348513 RBBP5Q15291 538 aaKnown RBP12.89□□□□□ -0.35
SMARCE1-202ENST00000348513 IQGAP2Q13576 1575 aa12.89□□□□□ -0.35
SMARCE1-202ENST00000348513 KIAA0586Q9BVV6 1533 aa12.89□□□□□ -0.35
SMARCE1-202ENST00000348513 ADGRF5Q8IZF2 1346 aa12.88□□□□□ -0.35
SMARCE1-202ENST00000348513 SOGA3Q5TF21 947 aa12.88□□□□□ -0.35
SMARCE1-202ENST00000348513 LARP1BQ659C4 914 aaKnown RBP12.88□□□□□ -0.35
SMARCE1-202ENST00000348513 BLOC1S2Q6QNY1 142 aa12.88□□□□□ -0.35
SMARCE1-202ENST00000348513 SPATS2LQ9NUQ6 558 aaKnown RBP12.88□□□□□ -0.35
SMARCE1-202ENST00000348513 F6X3S4 739 aa12.88□□□□□ -0.35
SMARCE1-202ENST00000348513 UBAC1Q9BSL1 405 aa12.88□□□□□ -0.35
SMARCE1-202ENST00000348513 V9GYY5 206 aaPredicted RBP12.88□□□□□ -0.35
SMARCE1-202ENST00000348513 DBN1Q16643 649 aa12.88□□□□□ -0.35
SMARCE1-202ENST00000348513 RPUSD2Q8IZ73 545 aaKnown RBP12.88□□□□□ -0.35
SMARCE1-202ENST00000348513 ZNHIT6Q9NWK9 470 aaKnown RBP12.88□□□□□ -0.35
SMARCE1-202ENST00000348513 K7ELQ4 463 aaPredicted RBP12.87□□□□□ -0.35
SMARCE1-202ENST00000348513 SLFN5Q08AF3 891 aa12.87□□□□□ -0.35
SMARCE1-202ENST00000348513 SKAP1Q86WV1 359 aa12.87□□□□□ -0.35
SMARCE1-202ENST00000348513 ADGRL1O94910 1474 aa12.87□□□□□ -0.35
SMARCE1-202ENST00000348513 USP5P45974 858 aa12.87□□□□□ -0.35
SMARCE1-202ENST00000348513 NOLC1Q14978 699 aaKnown RBP eCLIP12.87□□□□□ -0.35
SMARCE1-202ENST00000348513 NAIPQ13075 1403 aa12.87□□□□□ -0.35
SMARCE1-202ENST00000348513 HMGXB3Q12766 1538 aa12.87□□□□□ -0.35
SMARCE1-202ENST00000348513 CCDC192P0DO97 292 aa12.87□□□□□ -0.35
SMARCE1-202ENST00000348513 ANKRD1Q15327 319 aa12.87□□□□□ -0.35
SMARCE1-202ENST00000348513 ZNF219Q9P2Y4 722 aaPredicted RBP12.87□□□□□ -0.35
SMARCE1-202ENST00000348513 SSBP05455 408 aaKnown RBP eCLIP12.87□□□□□ -0.35
SMARCE1-202ENST00000348513 FILIP1LQ4L180 1135 aa12.87□□□□□ -0.35
SMARCE1-202ENST00000348513 CEP120Q8N960 986 aa12.86□□□□□ -0.35
SMARCE1-202ENST00000348513 AIDAQ96BJ3 306 aa12.86□□□□□ -0.35
SMARCE1-202ENST00000348513 CCDC172P0C7W6 258 aa12.86□□□□□ -0.35
SMARCE1-202ENST00000348513 ZPR1O75312 459 aa12.86□□□□□ -0.35
SMARCE1-202ENST00000348513 SERPINC1P01008 464 aa12.86□□□□□ -0.35
SMARCE1-202ENST00000348513 POTEB2H3BUK9 544 aa12.86□□□□□ -0.35
SMARCE1-202ENST00000348513 WWC2Q6AWC2 1192 aa12.86□□□□□ -0.35
SMARCE1-202ENST00000348513 MYRIPQ8NFW9 859 aa12.86□□□□□ -0.35
SMARCE1-202ENST00000348513 TANGO6Q9C0B7 1094 aa12.86□□□□□ -0.35
SMARCE1-202ENST00000348513 PHF8Q9UPP1 1060 aa12.86□□□□□ -0.35
SMARCE1-202ENST00000348513 CASTP20810 708 aaKnown RBP12.86□□□□□ -0.35
SMARCE1-202ENST00000348513 TNMDQ9H2S6 317 aa12.86□□□□□ -0.35
SMARCE1-202ENST00000348513 BOLA2Q9H3K6 86 aa12.86□□□□□ -0.35
SMARCE1-202ENST00000348513 CEP83Q9Y592 693 aa12.86□□□□□ -0.35
SMARCE1-202ENST00000348513 SEPT6Q14141 434 aa12.85□□□□□ -0.35
SMARCE1-202ENST00000348513 GCKP35557 465 aa12.85□□□□□ -0.35
SMARCE1-202ENST00000348513 CEP57Q86XR8 500 aa12.85□□□□□ -0.35
SMARCE1-202ENST00000348513 SYCE3A1L190 88 aa12.85□□□□□ -0.35
SMARCE1-202ENST00000348513 U2AF2P26368 475 aaKnown RBP eCLIP12.85□□□□□ -0.358e-11■■■■□ 22.5
SMARCE1-202ENST00000348513 ANAPC15P60006 121 aa12.85□□□□□ -0.35
SMARCE1-202ENST00000348513 BIRC2Q13490 618 aa12.85□□□□□ -0.35
SMARCE1-202ENST00000348513 LOC102724159A0A0B4J2E5 919 aa12.84□□□□□ -0.35
SMARCE1-202ENST00000348513 PWP2Q15269 919 aaKnown RBP12.84□□□□□ -0.35
SMARCE1-202ENST00000348513 IDI1Q13907 227 aa12.84□□□□□ -0.35
SMARCE1-202ENST00000348513 SYCP1Q15431 976 aa12.84□□□□□ -0.35
SMARCE1-202ENST00000348513 TAF7Q15545 349 aaPredicted RBP12.84□□□□□ -0.35
SMARCE1-202ENST00000348513 JMYQ8N9B5 988 aa12.84□□□□□ -0.35
SMARCE1-202ENST00000348513 ANKIB1Q9P2G1 1089 aa12.84□□□□□ -0.35
SMARCE1-202ENST00000348513 MINDY4BA8MYZ0 360 aa12.84□□□□□ -0.35
SMARCE1-202ENST00000348513 C20orf194Q5TEA3 1177 aa12.84□□□□□ -0.35
SMARCE1-202ENST00000348513 SSH1Q8WYL5 1049 aa12.84□□□□□ -0.35
SMARCE1-202ENST00000348513 PTPN23Q9H3S7 1636 aa12.84□□□□□ -0.35
SMARCE1-202ENST00000348513 KIF14Q15058 1648 aa12.84□□□□□ -0.35
SMARCE1-202ENST00000348513 MYCNP04198 464 aaPredicted RBP12.84□□□□□ -0.35
SMARCE1-202ENST00000348513 GPTP24298 496 aa12.84□□□□□ -0.35
SMARCE1-202ENST00000348513 SMARCC1Q92922 1105 aaPredicted RBP12.84□□□□□ -0.35
SMARCE1-202ENST00000348513 SMARCE1Q969G3 411 aa12.84□□□□□ -0.35
SMARCE1-202ENST00000348513 WDR33Q9C0J8 1336 aaKnown RBP12.83□□□□□ -0.36
SMARCE1-202ENST00000348513 CEP135Q66GS9 1140 aa12.83□□□□□ -0.36
SMARCE1-202ENST00000348513 PAF1Q8N7H5 531 aa12.83□□□□□ -0.36
SMARCE1-202ENST00000348513 CCDC8Q9H0W5 538 aaPredicted RBP12.83□□□□□ -0.36
SMARCE1-202ENST00000348513 CAPN2P17655 700 aa12.83□□□□□ -0.36
SMARCE1-202ENST00000348513 MCM3P25205 808 aa12.83□□□□□ -0.36
SMARCE1-202ENST00000348513 MAP9Q49MG5 647 aa12.83□□□□□ -0.36
SMARCE1-202ENST00000348513 RPAP2Q8IXW5 612 aaPredicted RBP12.83□□□□□ -0.36
SMARCE1-202ENST00000348513 CRACR2AQ9BSW2 395 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms