RNA–Protein interactions for RNA: ENST00000347547.6

LRP8-202, Transcript of LDL receptor related protein 8, humanhuman

TSL 1 (best) BASIC

Gene LRP8, Length 2,382 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-202ENST00000347547 IGSF3O75054 1194 aa18.73■□□□□ 0.59
LRP8-202ENST00000347547 SYT1P21579 422 aa18.73■□□□□ 0.59
LRP8-202ENST00000347547 PLCB2Q00722 1185 aa18.73■□□□□ 0.59
LRP8-202ENST00000347547 SPC24Q8NBT2 197 aa18.73■□□□□ 0.59
LRP8-202ENST00000347547 KIF18AQ8NI77 898 aa18.73■□□□□ 0.59
LRP8-202ENST00000347547 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.73■□□□□ 0.59
LRP8-202ENST00000347547 PTGS1P23219 599 aa18.72■□□□□ 0.59
LRP8-202ENST00000347547 TTC14Q96N46 770 aa18.72■□□□□ 0.59
LRP8-202ENST00000347547 CCDC66A2RUB6 948 aa18.71■□□□□ 0.59
LRP8-202ENST00000347547 STAG3Q9UJ98 1225 aa18.71■□□□□ 0.59
LRP8-202ENST00000347547 AATKQ6ZMQ8 1374 aa18.71■□□□□ 0.59
LRP8-202ENST00000347547 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.71■□□□□ 0.59
LRP8-202ENST00000347547 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.71■□□□□ 0.59
LRP8-202ENST00000347547 FAM53CQ9NYF3 392 aa18.71■□□□□ 0.59
LRP8-202ENST00000347547 MAP2P11137 1827 aaKnown RBP18.7■□□□□ 0.58
LRP8-202ENST00000347547 PDE4CQ08493 712 aa18.7■□□□□ 0.58
LRP8-202ENST00000347547 TERF2Q15554 542 aa18.7■□□□□ 0.58
LRP8-202ENST00000347547 LRRCC1Q9C099 1032 aa18.7■□□□□ 0.58
LRP8-202ENST00000347547 TMEM2Q9UHN6 1383 aa18.7■□□□□ 0.58
LRP8-202ENST00000347547 CHL1O00533 1208 aa18.7■□□□□ 0.58
LRP8-202ENST00000347547 FIBPO43427 364 aa18.7■□□□□ 0.58
LRP8-202ENST00000347547 CREBRFQ8IUR6 639 aa18.7■□□□□ 0.58
LRP8-202ENST00000347547 CCT4P50991 539 aaKnown RBP18.69■□□□□ 0.58
LRP8-202ENST00000347547 ADAMTSL3P82987 1691 aa18.69■□□□□ 0.58
LRP8-202ENST00000347547 FAM83GA6ND36 823 aa18.69■□□□□ 0.58
LRP8-202ENST00000347547 KRT222Q8N1A0 295 aa18.69■□□□□ 0.58
LRP8-202ENST00000347547 CCDC112Q8NEF3 446 aa18.69■□□□□ 0.58
LRP8-202ENST00000347547 CABP1Q9NZU7 370 aa18.69■□□□□ 0.58
LRP8-202ENST00000347547 LIMCH1Q9UPQ0 1083 aa18.69■□□□□ 0.58
LRP8-202ENST00000347547 TNNT1P13805 278 aa18.68■□□□□ 0.58
LRP8-202ENST00000347547 FBLN1P23142 703 aa18.68■□□□□ 0.58
LRP8-202ENST00000347547 SLC20A2Q08357 652 aa18.68■□□□□ 0.58
LRP8-202ENST00000347547 CDK19Q9BWU1 502 aa18.68■□□□□ 0.58
LRP8-202ENST00000347547 ARHGAP23Q9P227 1491 aa18.68■□□□□ 0.58
LRP8-202ENST00000347547 CEBPAP49715 358 aaPredicted RBP18.68■□□□□ 0.58
LRP8-202ENST00000347547 SMC3Q9UQE7 1217 aa18.68■□□□□ 0.58
LRP8-202ENST00000347547 SLIT1O75093 1534 aa18.68■□□□□ 0.58
LRP8-202ENST00000347547 TSHZ3Q63HK5 1081 aa18.67■□□□□ 0.58
LRP8-202ENST00000347547 ZNF397Q8NF99 534 aaPredicted RBP18.67■□□□□ 0.58
LRP8-202ENST00000347547 RIMS1Q86UR5 1692 aaKnown RBP18.67■□□□□ 0.58
LRP8-202ENST00000347547 RAD50Q92878 1312 aa18.67■□□□□ 0.58
LRP8-202ENST00000347547 GNAI2P04899 355 aa18.67■□□□□ 0.58
LRP8-202ENST00000347547 CCDC186Q7Z3E2 898 aa18.67■□□□□ 0.58
LRP8-202ENST00000347547 PLA2G4DQ86XP0 818 aa18.67■□□□□ 0.58
LRP8-202ENST00000347547 AEBP1Q8IUX7 1158 aa18.67■□□□□ 0.58
LRP8-202ENST00000347547 RILPL2Q969X0 211 aa18.67■□□□□ 0.58
LRP8-202ENST00000347547 C16orf45Q96MC5 204 aaPredicted RBP18.67■□□□□ 0.58
LRP8-202ENST00000347547 EMILIN1Q9Y6C2 1016 aa18.67■□□□□ 0.58
LRP8-202ENST00000347547 MRVI1Q9Y6F6 885 aa18.67■□□□□ 0.58
LRP8-202ENST00000347547 TRIM6-TRIM34B2RNG4 842 aa18.66■□□□□ 0.58
LRP8-202ENST00000347547 ZSCAN25Q6NSZ9 544 aa18.66■□□□□ 0.58
LRP8-202ENST00000347547 MAP3K11Q16584 847 aa18.66■□□□□ 0.58
LRP8-202ENST00000347547 RUFY3Q7L099 469 aa18.66■□□□□ 0.58
LRP8-202ENST00000347547 MTMR6Q9Y217 621 aa18.66■□□□□ 0.58
LRP8-202ENST00000347547 EXOC6BQ9Y2D4 811 aa18.66■□□□□ 0.58
LRP8-202ENST00000347547 ARHGEF10O15013 1369 aa18.65■□□□□ 0.58
LRP8-202ENST00000347547 TYRO3Q06418 890 aa18.65■□□□□ 0.58
LRP8-202ENST00000347547 DCTN1Q14203 1278 aa18.65■□□□□ 0.58
LRP8-202ENST00000347547 SNX14Q9Y5W7 946 aa18.65■□□□□ 0.58
LRP8-202ENST00000347547 ZNF75DP51815 510 aa18.64■□□□□ 0.58
LRP8-202ENST00000347547 AK2P54819 239 aa18.64■□□□□ 0.58
LRP8-202ENST00000347547 DNM1Q05193 864 aaKnown RBP18.64■□□□□ 0.58
LRP8-202ENST00000347547 SLFNL1Q499Z3 407 aa18.64■□□□□ 0.58
LRP8-202ENST00000347547 RTF1Q92541 710 aaKnown RBP18.64■□□□□ 0.58
LRP8-202ENST00000347547 ELP1O95163 1332 aa18.64■□□□□ 0.58
LRP8-202ENST00000347547 CCDC171Q6TFL3 1326 aa18.64■□□□□ 0.58
LRP8-202ENST00000347547 ADAMTS13Q76LX8 1427 aa18.64■□□□□ 0.57
LRP8-202ENST00000347547 CPS1P31327 1500 aa18.64■□□□□ 0.57
LRP8-202ENST00000347547 PDIA4P13667 645 aaKnown RBP18.64■□□□□ 0.57
LRP8-202ENST00000347547 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.64■□□□□ 0.57
LRP8-202ENST00000347547 METP08581 1390 aa18.64■□□□□ 0.57
LRP8-202ENST00000347547 TECPR2O15040 1411 aa18.64■□□□□ 0.57
LRP8-202ENST00000347547 CDC25BP30305 580 aa18.63■□□□□ 0.57
LRP8-202ENST00000347547 LRMPQ12912 555 aa18.63■□□□□ 0.57
LRP8-202ENST00000347547 TDRD7Q8NHU6 1098 aaKnown RBP18.63■□□□□ 0.57
LRP8-202ENST00000347547 IPO4Q8TEX9 1081 aaKnown RBP18.63■□□□□ 0.57
LRP8-202ENST00000347547 TIGD1Q96MW7 591 aa18.63■□□□□ 0.57
LRP8-202ENST00000347547 EDC4Q6P2E9 1401 aaKnown RBP18.63■□□□□ 0.57
LRP8-202ENST00000347547 RBM43Q6ZSC3 357 aaKnown RBP18.63■□□□□ 0.57
LRP8-202ENST00000347547 UNC5CLQ8IV45 518 aa18.63■□□□□ 0.57
LRP8-202ENST00000347547 NUP62CLQ9H1M0 184 aa18.63■□□□□ 0.57
LRP8-202ENST00000347547 IL25Q9H293 177 aa18.63■□□□□ 0.57
LRP8-202ENST00000347547 NAP1L2Q9ULW6 460 aaPredicted RBP18.63■□□□□ 0.57
LRP8-202ENST00000347547 IRX5P78411 483 aaPredicted RBP18.62■□□□□ 0.57
LRP8-202ENST00000347547 SGSM2O43147 1006 aa18.62■□□□□ 0.57
LRP8-202ENST00000347547 ATP8B2P98198 1209 aa18.62■□□□□ 0.57
LRP8-202ENST00000347547 NRKQ7Z2Y5 1582 aa18.62■□□□□ 0.57
LRP8-202ENST00000347547 CBX8Q9HC52 389 aa18.62■□□□□ 0.57
LRP8-202ENST00000347547 SLC4A2P04920 1241 aa18.61■□□□□ 0.57
LRP8-202ENST00000347547 CEP135Q66GS9 1140 aa18.61■□□□□ 0.57
LRP8-202ENST00000347547 LUZP1Q86V48 1076 aa18.61■□□□□ 0.57
LRP8-202ENST00000347547 CALCOCO1Q9P1Z2 691 aa18.61■□□□□ 0.57
LRP8-202ENST00000347547 NAA30Q147X3 362 aaPredicted RBP18.61■□□□□ 0.57
LRP8-202ENST00000347547 KMT5BQ4FZB7 885 aa18.61■□□□□ 0.57
LRP8-202ENST00000347547 ZSCAN31Q96LW9 406 aaPredicted RBP18.61■□□□□ 0.57
LRP8-202ENST00000347547 LSG1Q9H089 658 aaKnown RBP18.61■□□□□ 0.57
LRP8-202ENST00000347547 ZNF142P52746 1687 aaPredicted RBP18.61■□□□□ 0.57
LRP8-202ENST00000347547 PLEKHG1Q9ULL1 1385 aa18.6■□□□□ 0.57
LRP8-202ENST00000347547 NEMFO60524 1076 aa18.6■□□□□ 0.57
LRP8-202ENST00000347547 GJB2P29033 226 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms