RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 IBSPP21815 317 aaPredicted RBP20.29■□□□□ 0.84
SPAST-202ENST00000345662 KLHL10Q6JEL2 608 aa20.29■□□□□ 0.84
SPAST-202ENST00000345662 CNNM1Q9NRU3 951 aa20.28■□□□□ 0.84
SPAST-202ENST00000345662 CNPY2Q9Y2B0 182 aa20.28■□□□□ 0.84
SPAST-202ENST00000345662 RPGRIP1LQ68CZ1 1315 aa20.28■□□□□ 0.84
SPAST-202ENST00000345662 GUCY1B3Q02153 619 aa20.28■□□□□ 0.84
SPAST-202ENST00000345662 CTDP1Q9Y5B0 961 aaPredicted RBP20.28■□□□□ 0.84
SPAST-202ENST00000345662 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.28■□□□□ 0.84
SPAST-202ENST00000345662 ANO6Q4KMQ2 910 aa20.27■□□□□ 0.84
SPAST-202ENST00000345662 DNAAF4Q8WXU2 420 aa20.27■□□□□ 0.84
SPAST-202ENST00000345662 MNAT1P51948 309 aa20.27■□□□□ 0.84
SPAST-202ENST00000345662 SPG7Q9UQ90 795 aa20.27■□□□□ 0.84
SPAST-202ENST00000345662 SEC24BO95487 1268 aa20.27■□□□□ 0.84
SPAST-202ENST00000345662 TUBB4AP04350 444 aa20.27■□□□□ 0.84
SPAST-202ENST00000345662 DYDC1Q8WWB3 177 aa20.27■□□□□ 0.84
SPAST-202ENST00000345662 PTPRCP08575 1304 aa20.27■□□□□ 0.83
SPAST-202ENST00000345662 BIN1O00499 593 aa20.27■□□□□ 0.83
SPAST-202ENST00000345662 SDSP20132 328 aa20.27■□□□□ 0.83
SPAST-202ENST00000345662 PAFAH1B1P43034 410 aa20.27■□□□□ 0.83
SPAST-202ENST00000345662 TERF1P54274 439 aa20.27■□□□□ 0.83
SPAST-202ENST00000345662 RBM42Q9BTD8 480 aaKnown RBP20.27■□□□□ 0.83
SPAST-202ENST00000345662 CNNM3Q8NE01 707 aa20.26■□□□□ 0.83
SPAST-202ENST00000345662 CCDC12Q8WUD4 166 aaPredicted RBP20.26■□□□□ 0.83
SPAST-202ENST00000345662 IL16Q14005 1332 aa20.26■□□□□ 0.83
SPAST-202ENST00000345662 CPLX3Q8WVH0 158 aa20.26■□□□□ 0.83
SPAST-202ENST00000345662 SYTL4Q96C24 671 aaPredicted RBP20.26■□□□□ 0.83
SPAST-202ENST00000345662 BOLA2Q9H3K6 86 aa20.26■□□□□ 0.83
SPAST-202ENST00000345662 ANAPC15P60006 121 aa20.26■□□□□ 0.83
SPAST-202ENST00000345662 MCM10Q7L590 875 aa20.26■□□□□ 0.83
SPAST-202ENST00000345662 UBAC1Q9BSL1 405 aa20.26■□□□□ 0.83
SPAST-202ENST00000345662 RTEL1-TNFRSF6BF6WH68 1400 aa20.25■□□□□ 0.83
SPAST-202ENST00000345662 KIF20AO95235 890 aa20.25■□□□□ 0.83
SPAST-202ENST00000345662 ZNF530Q6P9A1 599 aaPredicted RBP20.25■□□□□ 0.83
SPAST-202ENST00000345662 CCDC141Q6ZP82 1450 aa20.25■□□□□ 0.83
SPAST-202ENST00000345662 YEATS4O95619 227 aa20.25■□□□□ 0.83
SPAST-202ENST00000345662 CEP126Q9P2H0 1117 aa20.25■□□□□ 0.83
SPAST-202ENST00000345662 EPRSP07814 1512 aaKnown RBP20.25■□□□□ 0.83
SPAST-202ENST00000345662 NUP88Q99567 741 aaPredicted RBP20.25■□□□□ 0.83
SPAST-202ENST00000345662 SRRTQ9BXP5 876 aaKnown RBP20.25■□□□□ 0.83
SPAST-202ENST00000345662 MIS18AQ9NYP9 233 aa20.25■□□□□ 0.83
SPAST-202ENST00000345662 ABCC5O15440 1437 aa20.24■□□□□ 0.83
SPAST-202ENST00000345662 F6X3S4 739 aa20.24■□□□□ 0.83
SPAST-202ENST00000345662 MAP2K1Q02750 393 aaPredicted RBP20.24■□□□□ 0.83
SPAST-202ENST00000345662 DNAI1Q9UI46 699 aa20.24■□□□□ 0.83
SPAST-202ENST00000345662 IGSF3O75054 1194 aa20.24■□□□□ 0.83
SPAST-202ENST00000345662 ZSWIM4Q9H7M6 989 aa20.24■□□□□ 0.83
SPAST-202ENST00000345662 DISP3Q9P2K9 1392 aa20.24■□□□□ 0.83
SPAST-202ENST00000345662 ANKRD18AQ8IVF6 992 aa20.24■□□□□ 0.83
SPAST-202ENST00000345662 ARHGAP45Q92619 1136 aa20.24■□□□□ 0.83
SPAST-202ENST00000345662 LUZP1Q86V48 1076 aa20.23■□□□□ 0.83
SPAST-202ENST00000345662 ZSCAN16Q9H4T2 348 aaPredicted RBP20.23■□□□□ 0.83
SPAST-202ENST00000345662 USO1O60763 962 aaKnown RBP20.23■□□□□ 0.83
SPAST-202ENST00000345662 ZFP91Q96JP5 570 aaPredicted RBP20.23■□□□□ 0.83
SPAST-202ENST00000345662 KIF6Q6ZMV9 814 aa20.23■□□□□ 0.83
SPAST-202ENST00000345662 SLC26A8Q96RN1 970 aa20.23■□□□□ 0.83
SPAST-202ENST00000345662 BMP2KQ9NSY1 1161 aaPredicted RBP20.23■□□□□ 0.83
SPAST-202ENST00000345662 ZHX3Q9H4I2 956 aa20.22■□□□□ 0.83
SPAST-202ENST00000345662 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.22■□□□□ 0.83
SPAST-202ENST00000345662 V9GYY5 206 aaPredicted RBP20.22■□□□□ 0.83
SPAST-202ENST00000345662 FKBP15Q5T1M5 1219 aa20.22■□□□□ 0.83
SPAST-202ENST00000345662 TXNDC2Q86VQ3 553 aa20.22■□□□□ 0.83
SPAST-202ENST00000345662 EVI5LQ96CN4 794 aa20.22■□□□□ 0.83
SPAST-202ENST00000345662 MYL6BP14649 208 aa20.22■□□□□ 0.83
SPAST-202ENST00000345662 FBXO3Q9UK99 471 aa20.22■□□□□ 0.83
SPAST-202ENST00000345662 GNAT3A8MTJ3 354 aa20.21■□□□□ 0.83
SPAST-202ENST00000345662 PARD3Q8TEW0 1356 aa20.21■□□□□ 0.83
SPAST-202ENST00000345662 RSPH14Q9UHP6 348 aa20.21■□□□□ 0.83
SPAST-202ENST00000345662 ANKRD62A6NC57 917 aa20.21■□□□□ 0.83
SPAST-202ENST00000345662 F13A1P00488 732 aa20.21■□□□□ 0.83
SPAST-202ENST00000345662 TDO2P48775 406 aa20.21■□□□□ 0.83
SPAST-202ENST00000345662 TICAM2Q86XR7 235 aa20.21■□□□□ 0.83
SPAST-202ENST00000345662 GNL3LQ9NVN8 582 aaKnown RBP20.2■□□□□ 0.82
SPAST-202ENST00000345662 DACT1Q9NYF0 836 aa20.2■□□□□ 0.82
SPAST-202ENST00000345662 CDK13Q14004 1512 aaKnown RBP20.2■□□□□ 0.82
SPAST-202ENST00000345662 BTBD11A6QL63 1104 aa20.2■□□□□ 0.82
SPAST-202ENST00000345662 SOGA3Q5TF21 947 aa20.2■□□□□ 0.82
SPAST-202ENST00000345662 ECHDC1Q9NTX5 307 aa20.2■□□□□ 0.82
SPAST-202ENST00000345662 IFFO1Q0D2I5 559 aa20.2■□□□□ 0.82
SPAST-202ENST00000345662 RBSNQ9H1K0 784 aa20.2■□□□□ 0.82
SPAST-202ENST00000345662 PTGS1P23219 599 aa20.19■□□□□ 0.82
SPAST-202ENST00000345662 MCM6Q14566 821 aa20.19■□□□□ 0.82
SPAST-202ENST00000345662 CCT2P78371 535 aaKnown RBP20.19■□□□□ 0.82
SPAST-202ENST00000345662 DNAJC25Q9H1X3 360 aa20.19■□□□□ 0.82
SPAST-202ENST00000345662 SLC52A1Q9NWF4 448 aa20.19■□□□□ 0.82
SPAST-202ENST00000345662 ESYT1Q9BSJ8 1104 aa20.19■□□□□ 0.82
SPAST-202ENST00000345662 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.19■□□□□ 0.826e-6■■■■■ 48.1
SPAST-202ENST00000345662 UBASH3AP57075 661 aa20.18■□□□□ 0.82
SPAST-202ENST00000345662 IRX3P78415 501 aaPredicted RBP20.18■□□□□ 0.82
SPAST-202ENST00000345662 TYRO3Q06418 890 aa20.18■□□□□ 0.82
SPAST-202ENST00000345662 NAA15Q9BXJ9 866 aaKnown RBP20.18■□□□□ 0.82
SPAST-202ENST00000345662 TSHZ3Q63HK5 1081 aa20.18■□□□□ 0.82
SPAST-202ENST00000345662 PHAXQ9H814 394 aaKnown RBP20.18■□□□□ 0.82
SPAST-202ENST00000345662 CAPN2P17655 700 aa20.18■□□□□ 0.82
SPAST-202ENST00000345662 CCDC113Q9H0I3 377 aa20.18■□□□□ 0.82
SPAST-202ENST00000345662 SEPT11Q9NVA2 429 aaKnown RBP20.17■□□□□ 0.82
SPAST-202ENST00000345662 HMG20BQ9P0W2 317 aa20.17■□□□□ 0.82
SPAST-202ENST00000345662 NSD2O96028 1365 aa20.17■□□□□ 0.82
SPAST-202ENST00000345662 CCDC8Q9H0W5 538 aaPredicted RBP20.17■□□□□ 0.82
SPAST-202ENST00000345662 CCDC175P0C221 793 aa20.17■□□□□ 0.82
SPAST-202ENST00000345662 DNM1Q05193 864 aaKnown RBP20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms