RNA–Protein interactions for RNA: ENST00000344391.9

CEACAM1-202, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,619 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-202ENST00000344391 ABCC4O15439 1325 aa20.81■□□□□ 0.92
CEACAM1-202ENST00000344391 PTCD1O75127 700 aaKnown RBP20.81■□□□□ 0.92
CEACAM1-202ENST00000344391 USP16Q9Y5T5 823 aa20.81■□□□□ 0.92
CEACAM1-202ENST00000344391 RBM6P78332 1123 aaKnown RBP20.8■□□□□ 0.92
CEACAM1-202ENST00000344391 FLIIQ13045 1269 aa20.8■□□□□ 0.92
CEACAM1-202ENST00000344391 MVPQ14764 893 aaKnown RBP20.8■□□□□ 0.92
CEACAM1-202ENST00000344391 TMEM57Q8N5G2 664 aa20.79■□□□□ 0.92
CEACAM1-202ENST00000344391 BRWD3Q6RI45 1802 aa20.79■□□□□ 0.92
CEACAM1-202ENST00000344391 VSIG10Q8N0Z9 540 aa20.78■□□□□ 0.92
CEACAM1-202ENST00000344391 KCNQ2O43526 872 aa20.78■□□□□ 0.92
CEACAM1-202ENST00000344391 PDIA6Q15084 440 aa20.78■□□□□ 0.92
CEACAM1-202ENST00000344391 PHAXQ9H814 394 aaKnown RBP20.78■□□□□ 0.92
CEACAM1-202ENST00000344391 DDX21Q9NR30 783 aaKnown RBP eCLIP20.78■□□□□ 0.92
CEACAM1-202ENST00000344391 SBF2Q86WG5 1849 aa20.77■□□□□ 0.92
CEACAM1-202ENST00000344391 ANXA1P04083 346 aa20.77■□□□□ 0.92
CEACAM1-202ENST00000344391 PROSER3Q2NL68 480 aa20.77■□□□□ 0.92
CEACAM1-202ENST00000344391 NHSQ6T4R5 1651 aa20.77■□□□□ 0.91
CEACAM1-202ENST00000344391 HYPKQ9NX55 129 aa20.76■□□□□ 0.91
CEACAM1-202ENST00000344391 FKBP5Q13451 457 aaPredicted RBP20.75■□□□□ 0.91
CEACAM1-202ENST00000344391 FAM182BQ5T319 152 aa20.75■□□□□ 0.91
CEACAM1-202ENST00000344391 ITPRIPQ8IWB1 547 aa20.75■□□□□ 0.91
CEACAM1-202ENST00000344391 RBM42Q9BTD8 480 aaKnown RBP20.75■□□□□ 0.91
CEACAM1-202ENST00000344391 DDX19BQ9UMR2 479 aa20.75■□□□□ 0.91
CEACAM1-202ENST00000344391 ERBB4Q15303 1308 aa20.75■□□□□ 0.91
CEACAM1-202ENST00000344391 SLC4A9Q96Q91 983 aa20.75■□□□□ 0.91
CEACAM1-202ENST00000344391 TEX13AQ9BXU3 409 aaPredicted RBP20.75■□□□□ 0.91
CEACAM1-202ENST00000344391 RGS17Q9UGC6 210 aaPredicted RBP20.75■□□□□ 0.91
CEACAM1-202ENST00000344391 AAMPQ13685 434 aa20.74■□□□□ 0.91
CEACAM1-202ENST00000344391 INTS3Q68E01 1043 aaKnown RBP20.74■□□□□ 0.91
CEACAM1-202ENST00000344391 TJP1Q07157 1748 aa20.73■□□□□ 0.91
CEACAM1-202ENST00000344391 BTAF1O14981 1849 aa20.73■□□□□ 0.91
CEACAM1-202ENST00000344391 F6X3S4 739 aa20.72■□□□□ 0.91
CEACAM1-202ENST00000344391 B4GALNT3Q6L9W6 998 aa20.72■□□□□ 0.91
CEACAM1-202ENST00000344391 KRT27Q7Z3Y8 459 aa20.72■□□□□ 0.91
CEACAM1-202ENST00000344391 LRP10Q7Z4F1 713 aa20.72■□□□□ 0.91
CEACAM1-202ENST00000344391 DNAJC10Q8IXB1 793 aa20.72■□□□□ 0.91
CEACAM1-202ENST00000344391 SMARCC1Q92922 1105 aaPredicted RBP20.72■□□□□ 0.91
CEACAM1-202ENST00000344391 RXRBP28702 533 aa20.71■□□□□ 0.91
CEACAM1-202ENST00000344391 CCDC136Q96JN2 1154 aa20.71■□□□□ 0.91
CEACAM1-202ENST00000344391 N4BP2Q86UW6 1770 aaPredicted RBP20.71■□□□□ 0.91
CEACAM1-202ENST00000344391 PALLDQ8WX93 1383 aa20.71■□□□□ 0.91
CEACAM1-202ENST00000344391 MYL6BP14649 208 aa20.71■□□□□ 0.91
CEACAM1-202ENST00000344391 PTF1AQ7RTS3 328 aa20.71■□□□□ 0.91
CEACAM1-202ENST00000344391 CICQ96RK0 1608 aaPredicted RBP20.7■□□□□ 0.9
CEACAM1-202ENST00000344391 NBPF26B4DH59 902 aa20.7■□□□□ 0.9
CEACAM1-202ENST00000344391 NBPF14Q5TI25 921 aa20.7■□□□□ 0.9
CEACAM1-202ENST00000344391 NBPF10Q6P3W6 841 aaKnown RBP20.7■□□□□ 0.9
CEACAM1-202ENST00000344391 NBPF15Q8N660 670 aa20.7■□□□□ 0.9
CEACAM1-202ENST00000344391 ZNF831Q5JPB2 1677 aa20.69■□□□□ 0.9
CEACAM1-202ENST00000344391 PXDNLA1KZ92 1463 aa20.69■□□□□ 0.9
CEACAM1-202ENST00000344391 ZBTB7BO15156 539 aaPredicted RBP20.69■□□□□ 0.9
CEACAM1-202ENST00000344391 STARD3NLO95772 234 aa20.69■□□□□ 0.9
CEACAM1-202ENST00000344391 A1BGP04217 495 aa20.69■□□□□ 0.9
CEACAM1-202ENST00000344391 PIP4K2AP48426 406 aaPredicted RBP20.69■□□□□ 0.9
CEACAM1-202ENST00000344391 PI4KAP2A4QPH2 592 aa20.68■□□□□ 0.9
CEACAM1-202ENST00000344391 CCT4P50991 539 aaKnown RBP20.68■□□□□ 0.9
CEACAM1-202ENST00000344391 SLC4A10Q6U841 1118 aa20.68■□□□□ 0.9
CEACAM1-202ENST00000344391 PI4KAP1Q8N8J0 262 aa20.68■□□□□ 0.9
CEACAM1-202ENST00000344391 ADCY9O60503 1353 aa20.68■□□□□ 0.9
CEACAM1-202ENST00000344391 LOC102724428A0A0B4J2F2 783 aa20.67■□□□□ 0.9
CEACAM1-202ENST00000344391 CYP19A1P11511 503 aaPredicted RBP20.67■□□□□ 0.9
CEACAM1-202ENST00000344391 SIK1P57059 783 aa20.67■□□□□ 0.9
CEACAM1-202ENST00000344391 POTEAQ6S8J7 498 aa20.67■□□□□ 0.9
CEACAM1-202ENST00000344391 KSR2Q6VAB6 950 aa20.67■□□□□ 0.9
CEACAM1-202ENST00000344391 FAM196AQ6ZSG2 479 aa20.67■□□□□ 0.9
CEACAM1-202ENST00000344391 XAGE3Q8WTP9 111 aa20.67■□□□□ 0.9
CEACAM1-202ENST00000344391 CHMP4BQ9H444 224 aaKnown RBP20.67■□□□□ 0.9
CEACAM1-202ENST00000344391 ZBTB40Q9NUA8 1239 aa20.67■□□□□ 0.9
CEACAM1-202ENST00000344391 COPS6Q7L5N1 327 aa20.67■□□□□ 0.9
CEACAM1-202ENST00000344391 DNAAF4Q8WXU2 420 aa20.67■□□□□ 0.9
CEACAM1-202ENST00000344391 DDX58O95786 925 aaKnown RBP20.66■□□□□ 0.9
CEACAM1-202ENST00000344391 AIMP1Q12904 312 aaKnown RBP20.66■□□□□ 0.9
CEACAM1-202ENST00000344391 ATP6V1AP38606 617 aa20.65■□□□□ 0.9
CEACAM1-202ENST00000344391 BCL11BQ9C0K0 894 aaPredicted RBP20.65■□□□□ 0.9
CEACAM1-202ENST00000344391 MAP3K2Q9Y2U5 619 aa20.64■□□□□ 0.9
CEACAM1-202ENST00000344391 PCDHB15Q9Y5E8 787 aa20.64■□□□□ 0.89
CEACAM1-202ENST00000344391 LY75O60449 1722 aa20.63■□□□□ 0.89
CEACAM1-202ENST00000344391 COL5A3P25940 1745 aaPredicted RBP20.63■□□□□ 0.89
CEACAM1-202ENST00000344391 ATP10DQ9P241 1426 aa20.63■□□□□ 0.89
CEACAM1-202ENST00000344391 ITPK1Q13572 414 aa20.63■□□□□ 0.89
CEACAM1-202ENST00000344391 BEND3Q5T5X7 828 aa20.63■□□□□ 0.89
CEACAM1-202ENST00000344391 ANKRD13DQ6ZTN6 518 aa20.62■□□□□ 0.89
CEACAM1-202ENST00000344391 RREB1Q92766 1687 aa20.62■□□□□ 0.89
CEACAM1-202ENST00000344391 RIC3Q7Z5B4 369 aa20.61■□□□□ 0.89
CEACAM1-202ENST00000344391 SRCIN1Q9C0H9 1055 aa20.61■□□□□ 0.89
CEACAM1-202ENST00000344391 ARFGEF2Q9Y6D5 1785 aa20.61■□□□□ 0.89
CEACAM1-202ENST00000344391 EP400Q96L91 3159 aa20.61■□□□□ 0.89
CEACAM1-202ENST00000344391 MYH14Q7Z406 1995 aaKnown RBP20.61■□□□□ 0.89
CEACAM1-202ENST00000344391 ZBTB1Q9Y2K1 713 aa20.6■□□□□ 0.89
CEACAM1-202ENST00000344391 NUP188Q5SRE5 1749 aa20.6■□□□□ 0.89
CEACAM1-202ENST00000344391 TTLL7Q6ZT98 887 aa20.6■□□□□ 0.89
CEACAM1-202ENST00000344391 PLBD2Q8NHP8 589 aa20.6■□□□□ 0.89
CEACAM1-202ENST00000344391 MEIS3Q99687 375 aa20.6■□□□□ 0.89
CEACAM1-202ENST00000344391 INTS5Q6P9B9 1019 aaKnown RBP20.59■□□□□ 0.89
CEACAM1-202ENST00000344391 KDM2BQ8NHM5 1336 aa20.58■□□□□ 0.89
CEACAM1-202ENST00000344391 ALDH1L1O75891 902 aa20.58■□□□□ 0.89
CEACAM1-202ENST00000344391 IL6STP40189 918 aaPredicted RBP20.58■□□□□ 0.89
CEACAM1-202ENST00000344391 CRKLP46109 303 aaKnown RBP20.58■□□□□ 0.89
CEACAM1-202ENST00000344391 METTL22Q9BUU2 404 aaPredicted RBP20.58■□□□□ 0.89
CEACAM1-202ENST00000344391 CCDC87Q9NVE4 849 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms