RNA–Protein interactions for RNA: ENST00000342887.1

CFAP54-201, Transcript of cilia and flagella associated protein 54, humanhuman

TSL 2

Gene CFAP54, Length 3,686 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-201ENST00000342887 K7ELQ4 463 aaPredicted RBP10.11□□□□□ -0.79
CFAP54-201ENST00000342887 AEBP2Q6ZN18 517 aaPredicted RBP10.11□□□□□ -0.79
CFAP54-201ENST00000342887 LNPKQ9C0E8 428 aa10.11□□□□□ -0.79
CFAP54-201ENST00000342887 IL25Q9H293 177 aa10.11□□□□□ -0.79
CFAP54-201ENST00000342887 MYO5AQ9Y4I1 1855 aaKnown RBP10.1□□□□□ -0.79
CFAP54-201ENST00000342887 ALDH8A1Q9H2A2 487 aaPredicted RBP10.1□□□□□ -0.79
CFAP54-201ENST00000342887 C16orf71Q8IYS4 520 aaPredicted RBP10.1□□□□□ -0.79
CFAP54-201ENST00000342887 TMEM87AQ8NBN3 555 aa10.1□□□□□ -0.79
CFAP54-201ENST00000342887 TNPO1Q92973 898 aaKnown RBP10.1□□□□□ -0.79
CFAP54-201ENST00000342887 FAM43AQ8N2R8 423 aa10.1□□□□□ -0.79
CFAP54-201ENST00000342887 DOT1LQ8TEK3 1739 aa10.09□□□□□ -0.79
CFAP54-201ENST00000342887 PNMA6EA0A0J9YXQ4 647 aa10.09□□□□□ -0.79
CFAP54-201ENST00000342887 ZNF445P59923 1031 aa10.09□□□□□ -0.79
CFAP54-201ENST00000342887 NBPF6Q5VWK0 638 aa10.09□□□□□ -0.79
CFAP54-201ENST00000342887 NBPF4Q96M43 638 aa10.09□□□□□ -0.79
CFAP54-201ENST00000342887 C1orf115Q9H7X2 142 aa10.09□□□□□ -0.79
CFAP54-201ENST00000342887 PPP1R9BQ96SB3 815 aa10.09□□□□□ -0.79
CFAP54-201ENST00000342887 EID1Q9Y6B2 187 aa10.09□□□□□ -0.79
CFAP54-201ENST00000342887 XRCC6P12956 609 aaKnown RBP eCLIP10.09□□□□□ -0.79
CFAP54-201ENST00000342887 FLIIQ13045 1269 aa10.09□□□□□ -0.79
CFAP54-201ENST00000342887 RABEP1Q15276 862 aa10.09□□□□□ -0.79
CFAP54-201ENST00000342887 ZNF646O15015 1829 aaPredicted RBP10.08□□□□□ -0.8
CFAP54-201ENST00000342887 COL5A2P05997 1499 aaPredicted RBP10.08□□□□□ -0.8
CFAP54-201ENST00000342887 MED23Q9ULK4 1368 aa10.08□□□□□ -0.8
CFAP54-201ENST00000342887 CANXP27824 592 aaKnown RBP10.08□□□□□ -0.8
CFAP54-201ENST00000342887 TICAM2Q86XR7 235 aa10.08□□□□□ -0.8
CFAP54-201ENST00000342887 PDLIM2Q96JY6 352 aa10.08□□□□□ -0.8
CFAP54-201ENST00000342887 SLC26A8Q96RN1 970 aa10.08□□□□□ -0.8
CFAP54-201ENST00000342887 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.08□□□□□ -0.8
CFAP54-201ENST00000342887 SBF2Q86WG5 1849 aa10.08□□□□□ -0.8
CFAP54-201ENST00000342887 CASP7P55210 303 aa10.08□□□□□ -0.8
CFAP54-201ENST00000342887 TAF7Q15545 349 aaPredicted RBP10.08□□□□□ -0.8
CFAP54-201ENST00000342887 AKAP4Q5JQC9 854 aa10.08□□□□□ -0.8
CFAP54-201ENST00000342887 INTS4Q96HW7 963 aaKnown RBP10.07□□□□□ -0.8
CFAP54-201ENST00000342887 MAST2Q6P0Q8 1798 aa10.07□□□□□ -0.8
CFAP54-201ENST00000342887 ERBB3P21860 1342 aa10.07□□□□□ -0.8
CFAP54-201ENST00000342887 LMBRD1Q9NUN5 540 aa10.06□□□□□ -0.8
CFAP54-201ENST00000342887 GAS2L3Q86XJ1 694 aa10.06□□□□□ -0.8
CFAP54-201ENST00000342887 STAG3Q9UJ98 1225 aa10.06□□□□□ -0.8
CFAP54-201ENST00000342887 PHF8Q9UPP1 1060 aa10.06□□□□□ -0.8
CFAP54-201ENST00000342887 CHMLP26374 656 aa10.06□□□□□ -0.8
CFAP54-201ENST00000342887 HSPA4P34932 840 aa10.06□□□□□ -0.8
CFAP54-201ENST00000342887 ESYT1Q9BSJ8 1104 aa10.06□□□□□ -0.8
CFAP54-201ENST00000342887 DDX60LQ5H9U9 1706 aaKnown RBP10.06□□□□□ -0.8
CFAP54-201ENST00000342887 RBM10P98175 930 aaKnown RBP10.05□□□□□ -0.8
CFAP54-201ENST00000342887 ANKRD45Q5TZF3 282 aa10.05□□□□□ -0.8
CFAP54-201ENST00000342887 RBM42Q9BTD8 480 aaKnown RBP10.05□□□□□ -0.8
CFAP54-201ENST00000342887 LAMB1P07942 1786 aa10.05□□□□□ -0.8
CFAP54-201ENST00000342887 KCNH5Q8NCM2 988 aa10.05□□□□□ -0.8
CFAP54-201ENST00000342887 SLC4A2P04920 1241 aa10.05□□□□□ -0.8
CFAP54-201ENST00000342887 SRCIN1Q9C0H9 1055 aa10.05□□□□□ -0.8
CFAP54-201ENST00000342887 LSG1Q9H089 658 aaKnown RBP10.05□□□□□ -0.8
CFAP54-201ENST00000342887 LY75O60449 1722 aa10.04□□□□□ -0.8
CFAP54-201ENST00000342887 RAB11FIP3O75154 756 aa10.04□□□□□ -0.8
CFAP54-201ENST00000342887 ST3GAL1Q11201 340 aa10.04□□□□□ -0.8
CFAP54-201ENST00000342887 TSGA10IPQ3SY00 556 aa10.04□□□□□ -0.8
CFAP54-201ENST00000342887 CCDC30Q5VVM6 783 aa10.04□□□□□ -0.8
CFAP54-201ENST00000342887 DDX11L8A8MPP1 907 aa10.04□□□□□ -0.8
CFAP54-201ENST00000342887 BRD1O95696 1058 aa10.04□□□□□ -0.8
CFAP54-201ENST00000342887 RFX5P48382 616 aaPredicted RBP10.04□□□□□ -0.8
CFAP54-201ENST00000342887 KLHL40Q2TBA0 621 aa10.04□□□□□ -0.8
CFAP54-201ENST00000342887 RABL6Q3YEC7 729 aaPredicted RBP10.04□□□□□ -0.8
CFAP54-201ENST00000342887 BCL9LQ86UU0 1499 aa10.04□□□□□ -0.8
CFAP54-201ENST00000342887 RNMTO43148 476 aaKnown RBP10.04□□□□□ -0.8
CFAP54-201ENST00000342887 GIGYF1O75420 1035 aaPredicted RBP10.04□□□□□ -0.8
CFAP54-201ENST00000342887 AXIN2Q9Y2T1 843 aa10.04□□□□□ -0.8
CFAP54-201ENST00000342887 MFAP1P55081 439 aaKnown RBP10.03□□□□□ -0.8
CFAP54-201ENST00000342887 NKX1-1Q15270 411 aaPredicted RBP10.03□□□□□ -0.8
CFAP54-201ENST00000342887 UNC5CLQ8IV45 518 aa10.03□□□□□ -0.8
CFAP54-201ENST00000342887 DNAJC5Q9H3Z4 198 aa10.03□□□□□ -0.8
CFAP54-201ENST00000342887 CWC22Q9HCG8 908 aaKnown RBP10.03□□□□□ -0.8
CFAP54-201ENST00000342887 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.03□□□□□ -0.8
CFAP54-201ENST00000342887 TAF1LQ8IZX4 1826 aa10.03□□□□□ -0.8
CFAP54-201ENST00000342887 TTC41PQ6P2S7 1318 aa10.03□□□□□ -0.8
CFAP54-201ENST00000342887 RAD50Q92878 1312 aa10.03□□□□□ -0.8
CFAP54-201ENST00000342887 GNAI2P04899 355 aa10.03□□□□□ -0.8
CFAP54-201ENST00000342887 MLECQ14165 292 aa10.03□□□□□ -0.8
CFAP54-201ENST00000342887 COL4A1P02462 1669 aa10.03□□□□□ -0.8
CFAP54-201ENST00000342887 NHSQ6T4R5 1651 aa10.03□□□□□ -0.8
CFAP54-201ENST00000342887 PTMSP20962 102 aa10.03□□□□□ -0.8
CFAP54-201ENST00000342887 ALDH1L1O75891 902 aa10.02□□□□□ -0.8
CFAP54-201ENST00000342887 FGD1P98174 961 aa10.02□□□□□ -0.8
CFAP54-201ENST00000342887 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.02□□□□□ -0.8
CFAP54-201ENST00000342887 GNAI3P08754 354 aa10.02□□□□□ -0.81
CFAP54-201ENST00000342887 FOCADQ5VW36 1801 aa10.02□□□□□ -0.81
CFAP54-201ENST00000342887 TRAK2O60296 914 aa10.02□□□□□ -0.81
CFAP54-201ENST00000342887 AMOTQ4VCS5 1084 aa10.02□□□□□ -0.81
CFAP54-201ENST00000342887 USPL1Q5W0Q7 1092 aa10.02□□□□□ -0.81
CFAP54-201ENST00000342887 LGR6Q9HBX8 967 aa10.02□□□□□ -0.81
CFAP54-201ENST00000342887 RRAGDQ9NQL2 400 aaPredicted RBP10.02□□□□□ -0.81
CFAP54-201ENST00000342887 BAG4O95429 457 aaKnown RBP10.01□□□□□ -0.81
CFAP54-201ENST00000342887 UPF2Q9HAU5 1272 aaKnown RBP10.01□□□□□ -0.81
CFAP54-201ENST00000342887 TSPYL4Q9UJ04 414 aa10.01□□□□□ -0.81
CFAP54-201ENST00000342887 ERBB4Q15303 1308 aa10.01□□□□□ -0.81
CFAP54-201ENST00000342887 ATRNO75882 1429 aa10.01□□□□□ -0.81
CFAP54-201ENST00000342887 PALD1Q9ULE6 856 aa10.01□□□□□ -0.81
CFAP54-201ENST00000342887 LTBP4Q8N2S1 1624 aa10.01□□□□□ -0.81
CFAP54-201ENST00000342887 SGSM2O43147 1006 aa10.01□□□□□ -0.81
CFAP54-201ENST00000342887 CDK5RAP2Q96SN8 1893 aa10.01□□□□□ -0.81
CFAP54-201ENST00000342887 THSD7AQ9UPZ6 1657 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms