RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 GLI3P10071 1580 aa24.95■■□□□ 1.58
RTN1-202ENST00000342503 ERVV-2B6SEH9 535 aa24.95■■□□□ 1.58
RTN1-202ENST00000342503 LAMB4A4D0S4 1761 aa24.94■■□□□ 1.58
RTN1-202ENST00000342503 SNRPA1P09661 255 aaKnown RBP24.94■■□□□ 1.58
RTN1-202ENST00000342503 PAPPAQ13219 1627 aa24.94■■□□□ 1.58
RTN1-202ENST00000342503 UBR2Q8IWV8 1755 aa24.93■■□□□ 1.58
RTN1-202ENST00000342503 UBTFL1P0CB47 393 aaPredicted RBP24.93■■□□□ 1.58
RTN1-202ENST00000342503 KSR2Q6VAB6 950 aa24.93■■□□□ 1.58
RTN1-202ENST00000342503 LRRFIP2Q9Y608 721 aaKnown RBP24.93■■□□□ 1.58
RTN1-202ENST00000342503 TOGARAM1Q9Y4F4 1720 aa24.93■■□□□ 1.58
RTN1-202ENST00000342503 PLCH1Q4KWH8 1693 aa24.92■■□□□ 1.58
RTN1-202ENST00000342503 ATP8B2P98198 1209 aa24.92■■□□□ 1.58
RTN1-202ENST00000342503 MAP3K2Q9Y2U5 619 aa24.92■■□□□ 1.58
RTN1-202ENST00000342503 USP16Q9Y5T5 823 aa24.91■■□□□ 1.58
RTN1-202ENST00000342503 ZBTB47Q9UFB7 747 aaPredicted RBP24.9■■□□□ 1.58
RTN1-202ENST00000342503 WNK3Q9BYP7 1800 aa24.9■■□□□ 1.58
RTN1-202ENST00000342503 DISP2A7MBM2 1401 aa24.89■■□□□ 1.58
RTN1-202ENST00000342503 PNMA6EA0A0J9YXQ4 647 aa24.89■■□□□ 1.57
RTN1-202ENST00000342503 TOM1O60784 492 aa24.89■■□□□ 1.57
RTN1-202ENST00000342503 DDX58O95786 925 aaKnown RBP24.89■■□□□ 1.57
RTN1-202ENST00000342503 MYL6BP14649 208 aa24.89■■□□□ 1.57
RTN1-202ENST00000342503 AIMP1Q12904 312 aaKnown RBP24.89■■□□□ 1.57
RTN1-202ENST00000342503 NOP58Q9Y2X3 529 aaKnown RBP24.89■■□□□ 1.57
RTN1-202ENST00000342503 PIP4K2BP78356 416 aa24.88■■□□□ 1.57
RTN1-202ENST00000342503 APBB1O00213 710 aa24.87■■□□□ 1.57
RTN1-202ENST00000342503 SMARCA5O60264 1052 aaPredicted RBP24.87■■□□□ 1.57
RTN1-202ENST00000342503 ALDH1L1O75891 902 aa24.87■■□□□ 1.57
RTN1-202ENST00000342503 BMP2KLQ5H9B9 411 aa24.87■■□□□ 1.57
RTN1-202ENST00000342503 KCPQ6ZWJ8 1503 aa24.87■■□□□ 1.57
RTN1-202ENST00000342503 NBPF7P0C2Y1 421 aaPredicted RBP24.86■■□□□ 1.57
RTN1-202ENST00000342503 PLEKHM2Q8IWE5 1019 aa24.86■■□□□ 1.57
RTN1-202ENST00000342503 C16orf71Q8IYS4 520 aaPredicted RBP24.86■■□□□ 1.57
RTN1-202ENST00000342503 DDRGK1Q96HY6 314 aa24.86■■□□□ 1.57
RTN1-202ENST00000342503 NRAPQ86VF7 1730 aa24.86■■□□□ 1.57
RTN1-202ENST00000342503 ADAMTS2O95450 1211 aa24.85■■□□□ 1.57
RTN1-202ENST00000342503 XAGE3Q8WTP9 111 aa24.85■■□□□ 1.57
RTN1-202ENST00000342503 ERICH6Q7L0X2 663 aa24.84■■□□□ 1.57
RTN1-202ENST00000342503 LRP10Q7Z4F1 713 aa24.84■■□□□ 1.57
RTN1-202ENST00000342503 BCL11AQ9H165 835 aa24.84■■□□□ 1.57
RTN1-202ENST00000342503 EXOC6BQ9Y2D4 811 aa24.84■■□□□ 1.57
RTN1-202ENST00000342503 COPS6Q7L5N1 327 aa24.83■■□□□ 1.57
RTN1-202ENST00000342503 ITGB4P16144 1822 aa24.83■■□□□ 1.57
RTN1-202ENST00000342503 PIP4K2AP48426 406 aaPredicted RBP24.83■■□□□ 1.57
RTN1-202ENST00000342503 RIC3Q7Z5B4 369 aa24.83■■□□□ 1.57
RTN1-202ENST00000342503 CWF19L2Q2TBE0 894 aaKnown RBP24.82■■□□□ 1.56
RTN1-202ENST00000342503 LINS1Q8NG48 757 aa24.82■■□□□ 1.56
RTN1-202ENST00000342503 OTUD7AQ8TE49 926 aaPredicted RBP24.82■■□□□ 1.56
RTN1-202ENST00000342503 SSH3Q8TE77 659 aa24.82■■□□□ 1.56
RTN1-202ENST00000342503 UPF2Q9HAU5 1272 aaKnown RBP24.82■■□□□ 1.56
RTN1-202ENST00000342503 TNS2Q63HR2 1409 aa24.82■■□□□ 1.56
RTN1-202ENST00000342503 PPP1R42Q7Z4L9 355 aa24.81■■□□□ 1.56
RTN1-202ENST00000342503 TMOD3Q9NYL9 352 aa24.81■■□□□ 1.56
RTN1-202ENST00000342503 C9orf78Q9NZ63 289 aaPredicted RBP24.81■■□□□ 1.56
RTN1-202ENST00000342503 ARFGEF2Q9Y6D5 1785 aa24.8■■□□□ 1.56
RTN1-202ENST00000342503 POLA2Q14181 598 aa24.8■■□□□ 1.56
RTN1-202ENST00000342503 IBTKQ9P2D0 1353 aaPredicted RBP24.8■■□□□ 1.56
RTN1-202ENST00000342503 NUTM2BA6NNL0 878 aaPredicted RBP24.79■■□□□ 1.56
RTN1-202ENST00000342503 NUTM2EB1AL46 878 aaPredicted RBP24.79■■□□□ 1.56
RTN1-202ENST00000342503 TTC22Q5TAA0 569 aa24.79■■□□□ 1.56
RTN1-202ENST00000342503 NUTM2AQ8IVF1 878 aaPredicted RBP24.79■■□□□ 1.56
RTN1-202ENST00000342503 ERBB4Q15303 1308 aa24.79■■□□□ 1.56
RTN1-202ENST00000342503 GSPT1P15170 499 aaKnown RBP24.78■■□□□ 1.56
RTN1-202ENST00000342503 AFDNP55196 1824 aaKnown RBP24.78■■□□□ 1.56
RTN1-202ENST00000342503 PTCD1O75127 700 aaKnown RBP24.78■■□□□ 1.56
RTN1-202ENST00000342503 IGKV5-2P06315 115 aa24.78■■□□□ 1.56
RTN1-202ENST00000342503 ANKRD13DQ6ZTN6 518 aa24.78■■□□□ 1.56
RTN1-202ENST00000342503 TBC1D32Q96NH3 1257 aa24.78■■□□□ 1.56
RTN1-202ENST00000342503 METTL22Q9BUU2 404 aaPredicted RBP24.78■■□□□ 1.56
RTN1-202ENST00000342503 LRRCC1Q9C099 1032 aa24.78■■□□□ 1.56
RTN1-202ENST00000342503 UBAP1LF5GYI3 381 aa24.77■■□□□ 1.56
RTN1-202ENST00000342503 EXOC5O00471 708 aa24.77■■□□□ 1.56
RTN1-202ENST00000342503 SRGAP3O43295 1099 aa24.77■■□□□ 1.56
RTN1-202ENST00000342503 MFAP1P55081 439 aaKnown RBP24.77■■□□□ 1.56
RTN1-202ENST00000342503 NWD2Q9ULI1 1742 aa24.76■■□□□ 1.55
RTN1-202ENST00000342503 LRP6O75581 1613 aa24.76■■□□□ 1.55
RTN1-202ENST00000342503 NBPF26B4DH59 902 aa24.76■■□□□ 1.55
RTN1-202ENST00000342503 NEXNQ0ZGT2 675 aa24.76■■□□□ 1.55
RTN1-202ENST00000342503 NBPF14Q5TI25 921 aa24.76■■□□□ 1.55
RTN1-202ENST00000342503 NBPF10Q6P3W6 841 aaKnown RBP24.76■■□□□ 1.55
RTN1-202ENST00000342503 NBPF15Q8N660 670 aa24.76■■□□□ 1.55
RTN1-202ENST00000342503 MYD88Q99836 296 aa24.76■■□□□ 1.55
RTN1-202ENST00000342503 UTYO14607 1347 aa24.76■■□□□ 1.55
RTN1-202ENST00000342503 GRM8O00222 908 aa24.75■■□□□ 1.55
RTN1-202ENST00000342503 PIGBQ92521 554 aa24.75■■□□□ 1.55
RTN1-202ENST00000342503 SPATA31A1Q5TZJ5 1347 aa24.75■■□□□ 1.55
RTN1-202ENST00000342503 HDAC5Q9UQL6 1122 aa24.75■■□□□ 1.55
RTN1-202ENST00000342503 NEURL1BA8MQ27 555 aa24.74■■□□□ 1.55
RTN1-202ENST00000342503 MTX1Q13505 466 aa24.73■■□□□ 1.55
RTN1-202ENST00000342503 NUP188Q5SRE5 1749 aa24.73■■□□□ 1.55
RTN1-202ENST00000342503 RAB11FIP3O75154 756 aa24.72■■□□□ 1.55
RTN1-202ENST00000342503 SURF6O75683 361 aaKnown RBP24.72■■□□□ 1.55
RTN1-202ENST00000342503 A1BGP04217 495 aa24.72■■□□□ 1.55
RTN1-202ENST00000342503 SUCLG2Q96I99 432 aa24.72■■□□□ 1.55
RTN1-202ENST00000342503 ASAP1Q9ULH1 1129 aa24.72■■□□□ 1.55
RTN1-202ENST00000342503 THRAP3Q9Y2W1 955 aaKnown RBP24.72■■□□□ 1.55
RTN1-202ENST00000342503 TBC1D9Q6ZT07 1266 aa24.72■■□□□ 1.55
RTN1-202ENST00000342503 CDCA7Q9BWT1 371 aaPredicted RBP24.72■■□□□ 1.55
RTN1-202ENST00000342503 OSBPL3Q9H4L5 887 aa24.72■■□□□ 1.55
RTN1-202ENST00000342503 CDC45O75419 566 aa24.71■■□□□ 1.55
RTN1-202ENST00000342503 GCKRQ14397 625 aa24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms