RNA–Protein interactions for RNA: ENST00000342409.3

FRMD4A-202, Transcript of FERM domain containing 4A, humanhuman

TSL 2

Gene FRMD4A, Length 1,741 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD4A-202ENST00000342409 USP16Q9Y5T5 823 aa21.66■■□□□ 1.06
FRMD4A-202ENST00000342409 SPATA31A6Q5VVP1 1343 aa21.64■■□□□ 1.06
FRMD4A-202ENST00000342409 EXOC5O00471 708 aa21.64■■□□□ 1.06
FRMD4A-202ENST00000342409 SNRPA1P09661 255 aaKnown RBP21.64■■□□□ 1.06
FRMD4A-202ENST00000342409 SMC5Q8IY18 1101 aa21.64■■□□□ 1.06
FRMD4A-202ENST00000342409 DDX21Q9NR30 783 aaKnown RBP eCLIP21.64■■□□□ 1.06
FRMD4A-202ENST00000342409 PDZRN3Q9UPQ7 1066 aa21.64■■□□□ 1.06
FRMD4A-202ENST00000342409 HSPA1LP34931 641 aa21.63■■□□□ 1.05
FRMD4A-202ENST00000342409 UNC5CLQ8IV45 518 aa21.63■■□□□ 1.05
FRMD4A-202ENST00000342409 LRP10Q7Z4F1 713 aa21.63■■□□□ 1.05
FRMD4A-202ENST00000342409 C8orf37Q96NL8 207 aa21.63■■□□□ 1.05
FRMD4A-202ENST00000342409 CDCA7Q9BWT1 371 aaPredicted RBP21.63■■□□□ 1.05
FRMD4A-202ENST00000342409 BARGINQ6ZT62 677 aa21.62■■□□□ 1.05
FRMD4A-202ENST00000342409 ARFGEF2Q9Y6D5 1785 aa21.62■■□□□ 1.05
FRMD4A-202ENST00000342409 PI4KAP2A4QPH2 592 aa21.61■■□□□ 1.05
FRMD4A-202ENST00000342409 FNBP4Q8N3X1 1017 aaPredicted RBP21.61■■□□□ 1.05
FRMD4A-202ENST00000342409 PI4KAP1Q8N8J0 262 aa21.61■■□□□ 1.05
FRMD4A-202ENST00000342409 PIGBQ92521 554 aa21.61■■□□□ 1.05
FRMD4A-202ENST00000342409 HYPKQ9NX55 129 aa21.61■■□□□ 1.05
FRMD4A-202ENST00000342409 BCL9O00512 1426 aa21.61■■□□□ 1.05
FRMD4A-202ENST00000342409 TMOD3Q9NYL9 352 aa21.6■■□□□ 1.05
FRMD4A-202ENST00000342409 RGS3P49796 1198 aa21.6■■□□□ 1.05
FRMD4A-202ENST00000342409 DNAAF4Q8WXU2 420 aa21.6■■□□□ 1.05
FRMD4A-202ENST00000342409 NGLY1Q96IV0 654 aa21.6■■□□□ 1.05
FRMD4A-202ENST00000342409 NUP188Q5SRE5 1749 aa21.6■■□□□ 1.05
FRMD4A-202ENST00000342409 VPS72Q15906 364 aa21.59■■□□□ 1.05
FRMD4A-202ENST00000342409 BEND3Q5T5X7 828 aa21.59■■□□□ 1.05
FRMD4A-202ENST00000342409 ANKRD44Q8N8A2 993 aa21.59■■□□□ 1.05
FRMD4A-202ENST00000342409 AFDNP55196 1824 aaKnown RBP21.59■■□□□ 1.05
FRMD4A-202ENST00000342409 CEP85Q6P2H3 762 aa21.58■■□□□ 1.05
FRMD4A-202ENST00000342409 RBM19Q9Y4C8 960 aaKnown RBP21.58■■□□□ 1.05
FRMD4A-202ENST00000342409 TJP1Q07157 1748 aa21.58■■□□□ 1.05
FRMD4A-202ENST00000342409 THSD7AQ9UPZ6 1657 aa21.58■■□□□ 1.04
FRMD4A-202ENST00000342409 DDB1Q16531 1140 aa21.58■■□□□ 1.04
FRMD4A-202ENST00000342409 USP44Q9H0E7 712 aa21.58■■□□□ 1.04
FRMD4A-202ENST00000342409 ASAP1Q9ULH1 1129 aa21.58■■□□□ 1.04
FRMD4A-202ENST00000342409 PIP4K2AP48426 406 aaPredicted RBP21.57■■□□□ 1.04
FRMD4A-202ENST00000342409 KSR2Q6VAB6 950 aa21.57■■□□□ 1.04
FRMD4A-202ENST00000342409 MARCH10Q8NA82 808 aaPredicted RBP21.57■■□□□ 1.04
FRMD4A-202ENST00000342409 ATG3Q9NT62 314 aa21.57■■□□□ 1.04
FRMD4A-202ENST00000342409 CCDC9Q9Y3X0 531 aaKnown RBP21.57■■□□□ 1.04
FRMD4A-202ENST00000342409 PTCD1O75127 700 aaKnown RBP21.56■■□□□ 1.04
FRMD4A-202ENST00000342409 MAP3K2Q9Y2U5 619 aa21.56■■□□□ 1.04
FRMD4A-202ENST00000342409 NBPF26B4DH59 902 aa21.55■■□□□ 1.04
FRMD4A-202ENST00000342409 MYL6BP14649 208 aa21.55■■□□□ 1.04
FRMD4A-202ENST00000342409 PDE4AP27815 886 aa21.55■■□□□ 1.04
FRMD4A-202ENST00000342409 NBPF14Q5TI25 921 aa21.55■■□□□ 1.04
FRMD4A-202ENST00000342409 NBPF10Q6P3W6 841 aaKnown RBP21.55■■□□□ 1.04
FRMD4A-202ENST00000342409 NBPF15Q8N660 670 aa21.55■■□□□ 1.04
FRMD4A-202ENST00000342409 SRCIN1Q9C0H9 1055 aa21.55■■□□□ 1.04
FRMD4A-202ENST00000342409 RPAP2Q8IXW5 612 aaPredicted RBP21.55■■□□□ 1.04
FRMD4A-202ENST00000342409 XAGE3Q8WTP9 111 aa21.55■■□□□ 1.04
FRMD4A-202ENST00000342409 NUCB1Q02818 461 aa21.53■■□□□ 1.04
FRMD4A-202ENST00000342409 AIMP1Q12904 312 aaKnown RBP21.53■■□□□ 1.04
FRMD4A-202ENST00000342409 COPS6Q7L5N1 327 aa21.53■■□□□ 1.04
FRMD4A-202ENST00000342409 ERBB4Q15303 1308 aa21.53■■□□□ 1.04
FRMD4A-202ENST00000342409 GNAI2P04899 355 aa21.52■■□□□ 1.04
FRMD4A-202ENST00000342409 GNAI3P08754 354 aa21.52■■□□□ 1.04
FRMD4A-202ENST00000342409 FAM98CQ17RN3 349 aaKnown RBP21.52■■□□□ 1.04
FRMD4A-202ENST00000342409 PRIM1P49642 420 aaKnown RBP21.52■■□□□ 1.03
FRMD4A-202ENST00000342409 GCC1Q96CN9 775 aa21.52■■□□□ 1.03
FRMD4A-202ENST00000342409 BACH2Q9BYV9 841 aa21.52■■□□□ 1.03
FRMD4A-202ENST00000342409 DCTPP1Q9H773 170 aa21.52■■□□□ 1.03
FRMD4A-202ENST00000342409 USP21Q9UK80 565 aa21.52■■□□□ 1.03
FRMD4A-202ENST00000342409 A1BGP04217 495 aa21.51■■□□□ 1.03
FRMD4A-202ENST00000342409 SLC4A9Q96Q91 983 aa21.51■■□□□ 1.03
FRMD4A-202ENST00000342409 LRRFIP2Q9Y608 721 aaKnown RBP21.5■■□□□ 1.03
FRMD4A-202ENST00000342409 CICQ96RK0 1608 aaPredicted RBP21.5■■□□□ 1.03
FRMD4A-202ENST00000342409 VSIG10Q8N0Z9 540 aa21.49■■□□□ 1.03
FRMD4A-202ENST00000342409 ALDH1L1O75891 902 aa21.49■■□□□ 1.03
FRMD4A-202ENST00000342409 DDX58O95786 925 aaKnown RBP21.49■■□□□ 1.03
FRMD4A-202ENST00000342409 NBPF7P0C2Y1 421 aaPredicted RBP21.49■■□□□ 1.03
FRMD4A-202ENST00000342409 IGKV5-2P06315 115 aa21.48■■□□□ 1.03
FRMD4A-202ENST00000342409 CWF19L2Q2TBE0 894 aaKnown RBP21.48■■□□□ 1.03
FRMD4A-202ENST00000342409 CHD1LQ86WJ1 897 aa21.48■■□□□ 1.03
FRMD4A-202ENST00000342409 DNAJC10Q8IXB1 793 aa21.48■■□□□ 1.03
FRMD4A-202ENST00000342409 UBTFL1P0CB47 393 aaPredicted RBP21.47■■□□□ 1.03
FRMD4A-202ENST00000342409 C8orf34Q49A92 452 aa21.47■■□□□ 1.03
FRMD4A-202ENST00000342409 LINS1Q8NG48 757 aa21.47■■□□□ 1.03
FRMD4A-202ENST00000342409 SYTL4Q96C24 671 aaPredicted RBP21.47■■□□□ 1.03
FRMD4A-202ENST00000342409 SBF2Q86WG5 1849 aa21.47■■□□□ 1.03
FRMD4A-202ENST00000342409 IBTKQ9P2D0 1353 aaPredicted RBP21.47■■□□□ 1.03
FRMD4A-202ENST00000342409 PNMA6EA0A0J9YXQ4 647 aa21.46■■□□□ 1.03
FRMD4A-202ENST00000342409 ATP8B2P98198 1209 aa21.46■■□□□ 1.03
FRMD4A-202ENST00000342409 ANKRD13DQ6ZTN6 518 aa21.46■■□□□ 1.03
FRMD4A-202ENST00000342409 ACSBG1Q96GR2 724 aa21.46■■□□□ 1.03
FRMD4A-202ENST00000342409 LNPKQ9C0E8 428 aa21.46■■□□□ 1.03
FRMD4A-202ENST00000342409 ATRNO75882 1429 aa21.46■■□□□ 1.03
FRMD4A-202ENST00000342409 AFF2P51816 1311 aa21.46■■□□□ 1.03
FRMD4A-202ENST00000342409 ANKRD45Q5TZF3 282 aa21.46■■□□□ 1.03
FRMD4A-202ENST00000342409 RIC3Q7Z5B4 369 aa21.46■■□□□ 1.03
FRMD4A-202ENST00000342409 METTL22Q9BUU2 404 aaPredicted RBP21.46■■□□□ 1.03
FRMD4A-202ENST00000342409 MYH14Q7Z406 1995 aaKnown RBP21.45■■□□□ 1.02
FRMD4A-202ENST00000342409 RREB1Q92766 1687 aa21.45■■□□□ 1.02
FRMD4A-202ENST00000342409 TTLL7Q6ZT98 887 aa21.45■■□□□ 1.02
FRMD4A-202ENST00000342409 RBM42Q9BTD8 480 aaKnown RBP21.45■■□□□ 1.02
FRMD4A-202ENST00000342409 UTYO14607 1347 aa21.44■■□□□ 1.02
FRMD4A-202ENST00000342409 MEX3CQ5U5Q3 659 aaKnown RBP21.44■■□□□ 1.02
FRMD4A-202ENST00000342409 COL5A3P25940 1745 aaPredicted RBP21.44■■□□□ 1.02
FRMD4A-202ENST00000342409 BTAF1O14981 1849 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms