RNA–Protein interactions for RNA: ENST00000342022.8

CCDC30-202, Transcript of coiled-coil domain containing 30, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CCDC30, Length 3,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-202ENST00000342022 A1BGP04217 495 aa9.74□□□□□ -0.85
CCDC30-202ENST00000342022 RIC3Q7Z5B4 369 aa9.74□□□□□ -0.85
CCDC30-202ENST00000342022 SPRYD3Q8NCJ5 442 aa9.74□□□□□ -0.85
CCDC30-202ENST00000342022 DCAF5Q96JK2 942 aa9.74□□□□□ -0.85
CCDC30-202ENST00000342022 KDM6AO15550 1401 aaPredicted RBP9.74□□□□□ -0.85
CCDC30-202ENST00000342022 NCOA3Q9Y6Q9 1424 aa9.74□□□□□ -0.85
CCDC30-202ENST00000342022 UBTFL1P0CB47 393 aaPredicted RBP9.74□□□□□ -0.85
CCDC30-202ENST00000342022 SMC5Q8IY18 1101 aa9.74□□□□□ -0.85
CCDC30-202ENST00000342022 XAGE3Q8WTP9 111 aa9.74□□□□□ -0.85
CCDC30-202ENST00000342022 DNAAF4Q8WXU2 420 aa9.74□□□□□ -0.85
CCDC30-202ENST00000342022 SRCIN1Q9C0H9 1055 aa9.74□□□□□ -0.85
CCDC30-202ENST00000342022 USP44Q9H0E7 712 aa9.74□□□□□ -0.85
CCDC30-202ENST00000342022 C9orf78Q9NZ63 289 aaPredicted RBP9.74□□□□□ -0.85
CCDC30-202ENST00000342022 DBF4Q9UBU7 674 aaPredicted RBP9.74□□□□□ -0.85
CCDC30-202ENST00000342022 ALS2Q96Q42 1657 aa9.73□□□□□ -0.85
CCDC30-202ENST00000342022 ASAP1Q9ULH1 1129 aa9.73□□□□□ -0.85
CCDC30-202ENST00000342022 GNAI2P04899 355 aa9.73□□□□□ -0.85
CCDC30-202ENST00000342022 CCT4P50991 539 aaKnown RBP9.73□□□□□ -0.85
CCDC30-202ENST00000342022 KCNQ4P56696 695 aa9.73□□□□□ -0.85
CCDC30-202ENST00000342022 RNF216Q9NWF9 866 aaPredicted RBP9.73□□□□□ -0.85
CCDC30-202ENST00000342022 NUCB1Q02818 461 aa9.72□□□□□ -0.85
CCDC30-202ENST00000342022 ZBTB3Q9H5J0 574 aa9.72□□□□□ -0.85
CCDC30-202ENST00000342022 TOM1O60784 492 aa9.71□□□□□ -0.85
CCDC30-202ENST00000342022 KLHDC4Q8TBB5 520 aa9.71□□□□□ -0.85
CCDC30-202ENST00000342022 NGLY1Q96IV0 654 aa9.71□□□□□ -0.85
CCDC30-202ENST00000342022 CARD10Q9BWT7 1032 aa9.71□□□□□ -0.85
CCDC30-202ENST00000342022 SIL1Q9H173 461 aa9.71□□□□□ -0.85
CCDC30-202ENST00000342022 SRGAP3O43295 1099 aa9.71□□□□□ -0.85
CCDC30-202ENST00000342022 MAP4K4O95819 1239 aaPredicted RBP9.71□□□□□ -0.85
CCDC30-202ENST00000342022 VASPP50552 380 aaPredicted RBP9.71□□□□□ -0.85
CCDC30-202ENST00000342022 ANKRD44Q8N8A2 993 aa9.71□□□□□ -0.85
CCDC30-202ENST00000342022 IPO9Q96P70 1041 aaKnown RBP9.71□□□□□ -0.85
CCDC30-202ENST00000342022 CCDC85AQ96PX6 553 aaPredicted RBP9.71□□□□□ -0.85
CCDC30-202ENST00000342022 MYD88Q99836 296 aa9.71□□□□□ -0.85
CCDC30-202ENST00000342022 COL5A2P05997 1499 aaPredicted RBP9.71□□□□□ -0.86
CCDC30-202ENST00000342022 SURF6O75683 361 aaKnown RBP9.71□□□□□ -0.86
CCDC30-202ENST00000342022 FMNL2Q96PY5 1086 aa9.71□□□□□ -0.86
CCDC30-202ENST00000342022 TMOD3Q9NYL9 352 aa9.71□□□□□ -0.86
CCDC30-202ENST00000342022 PA2G4Q9UQ80 394 aaKnown RBP9.71□□□□□ -0.86
CCDC30-202ENST00000342022 CPDO75976 1380 aa9.7□□□□□ -0.86
CCDC30-202ENST00000342022 ATXN8OSP0DMR3 200 aa9.7□□□□□ -0.86
CCDC30-202ENST00000342022 OS9Q13438 667 aaPredicted RBP9.7□□□□□ -0.86
CCDC30-202ENST00000342022 AAMPQ13685 434 aa9.7□□□□□ -0.86
CCDC30-202ENST00000342022 PPP1R42Q7Z4L9 355 aa9.7□□□□□ -0.86
CCDC30-202ENST00000342022 CHMP4BQ9H444 224 aaKnown RBP9.7□□□□□ -0.86
CCDC30-202ENST00000342022 PCDH11XQ9BZA7 1347 aa9.7□□□□□ -0.86
CCDC30-202ENST00000342022 PCDH11YQ9BZA8 1340 aa9.7□□□□□ -0.86
CCDC30-202ENST00000342022 MYCNP04198 464 aaPredicted RBP9.7□□□□□ -0.86
CCDC30-202ENST00000342022 SNRPA1P09661 255 aaKnown RBP9.7□□□□□ -0.86
CCDC30-202ENST00000342022 PRIM1P49642 420 aaKnown RBP9.7□□□□□ -0.86
CCDC30-202ENST00000342022 NUTM1Q86Y26 1132 aa9.7□□□□□ -0.86
CCDC30-202ENST00000342022 CHMP3Q9Y3E7 222 aa9.7□□□□□ -0.86
CCDC30-202ENST00000342022 EXOC5O00471 708 aa9.69□□□□□ -0.86
CCDC30-202ENST00000342022 PDIA6Q15084 440 aa9.69□□□□□ -0.86
CCDC30-202ENST00000342022 FAM98CQ17RN3 349 aaKnown RBP9.69□□□□□ -0.86
CCDC30-202ENST00000342022 BEND3Q5T5X7 828 aa9.69□□□□□ -0.86
CCDC30-202ENST00000342022 TTLL7Q6ZT98 887 aa9.69□□□□□ -0.86
CCDC30-202ENST00000342022 NOP58Q9Y2X3 529 aaKnown RBP9.69□□□□□ -0.86
CCDC30-202ENST00000342022 FAM177BA6PVY3 158 aa9.69□□□□□ -0.86
CCDC30-202ENST00000342022 SMIM5Q71RC9 77 aa9.69□□□□□ -0.86
CCDC30-202ENST00000342022 PIGBQ92521 554 aa9.69□□□□□ -0.86
CCDC30-202ENST00000342022 GCC1Q96CN9 775 aa9.69□□□□□ -0.86
CCDC30-202ENST00000342022 DCTPP1Q9H773 170 aa9.69□□□□□ -0.86
CCDC30-202ENST00000342022 ADCY9O60503 1353 aa9.69□□□□□ -0.86
CCDC30-202ENST00000342022 GNAI3P08754 354 aa9.69□□□□□ -0.86
CCDC30-202ENST00000342022 DDX21Q9NR30 783 aaKnown RBP eCLIP9.69□□□□□ -0.86
CCDC30-202ENST00000342022 PHRF1Q9P1Y6 1649 aaKnown RBP9.69□□□□□ -0.86
CCDC30-202ENST00000342022 DNAJC10Q8IXB1 793 aa9.68□□□□□ -0.86
CCDC30-202ENST00000342022 RPAP2Q8IXW5 612 aaPredicted RBP9.68□□□□□ -0.86
CCDC30-202ENST00000342022 NBPF26B4DH59 902 aa9.68□□□□□ -0.86
CCDC30-202ENST00000342022 HMMRO75330 724 aa9.68□□□□□ -0.86
CCDC30-202ENST00000342022 HSP90AB1P08238 724 aaKnown RBP9.68□□□□□ -0.86
CCDC30-202ENST00000342022 NBPF14Q5TI25 921 aa9.68□□□□□ -0.86
CCDC30-202ENST00000342022 NBPF10Q6P3W6 841 aaKnown RBP9.68□□□□□ -0.86
CCDC30-202ENST00000342022 KSR2Q6VAB6 950 aa9.68□□□□□ -0.86
CCDC30-202ENST00000342022 ANKRD13DQ6ZTN6 518 aa9.68□□□□□ -0.86
CCDC30-202ENST00000342022 NBPF15Q8N660 670 aa9.68□□□□□ -0.86
CCDC30-202ENST00000342022 SRCAPQ6ZRS2 3230 aa9.67□□□□□ -0.86
CCDC30-202ENST00000342022 UBE3BQ7Z3V4 1068 aa9.67□□□□□ -0.86
CCDC30-202ENST00000342022 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.67□□□□□ -0.86
CCDC30-202ENST00000342022 ATP10DQ9P241 1426 aa9.67□□□□□ -0.86
CCDC30-202ENST00000342022 ROBO1Q9Y6N7 1651 aa9.67□□□□□ -0.86
CCDC30-202ENST00000342022 PLEKHM2Q8IWE5 1019 aa9.67□□□□□ -0.86
CCDC30-202ENST00000342022 RILPL2Q969X0 211 aa9.67□□□□□ -0.86
CCDC30-202ENST00000342022 BABAM1Q9NWV8 329 aa9.67□□□□□ -0.86
CCDC30-202ENST00000342022 HYPKQ9NX55 129 aa9.67□□□□□ -0.86
CCDC30-202ENST00000342022 TRIM6-TRIM34B2RNG4 842 aa9.67□□□□□ -0.86
CCDC30-202ENST00000342022 KCNQ2O43526 872 aa9.67□□□□□ -0.86
CCDC30-202ENST00000342022 IGKV5-2P06315 115 aa9.67□□□□□ -0.86
CCDC30-202ENST00000342022 UPF2Q9HAU5 1272 aaKnown RBP9.67□□□□□ -0.86
CCDC30-202ENST00000342022 DDX58O95786 925 aaKnown RBP9.66□□□□□ -0.86
CCDC30-202ENST00000342022 GSPT1P15170 499 aaKnown RBP9.66□□□□□ -0.86
CCDC30-202ENST00000342022 GPTP24298 496 aa9.66□□□□□ -0.86
CCDC30-202ENST00000342022 NEXNQ0ZGT2 675 aa9.66□□□□□ -0.86
CCDC30-202ENST00000342022 DDB1Q16531 1140 aa9.66□□□□□ -0.86
CCDC30-202ENST00000342022 SOS1Q07889 1333 aaPredicted RBP9.66□□□□□ -0.86
CCDC30-202ENST00000342022 USP54Q70EL1 1684 aa9.66□□□□□ -0.86
CCDC30-202ENST00000342022 OVOS2A0A0G2JMS6 1433 aa9.66□□□□□ -0.86
CCDC30-202ENST00000342022 PTF1AQ7RTS3 328 aa9.66□□□□□ -0.86
CCDC30-202ENST00000342022 SUCLG2Q96I99 432 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms