RNA–Protein interactions for RNA: ENST00000341948.6

PCDHB13-201, Transcript of protocadherin beta 13, humanhuman

APPRIS P1 BASIC

Gene PCDHB13, Length 5,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13-201ENST00000341948 POLR3DP05423 398 aaPredicted RBP17.84■□□□□ 0.45
PCDHB13-201ENST00000341948 SOGA3Q5TF21 947 aa17.84■□□□□ 0.45
PCDHB13-201ENST00000341948 RSPH6AQ9H0K4 717 aa17.84■□□□□ 0.45
PCDHB13-201ENST00000341948 A0A0U1RQG5 324 aaPredicted RBP17.84■□□□□ 0.45
PCDHB13-201ENST00000341948 PIP4K2AP48426 406 aaPredicted RBP17.84■□□□□ 0.45
PCDHB13-201ENST00000341948 SETDB2Q96T68 719 aa17.84■□□□□ 0.45
PCDHB13-201ENST00000341948 KINO60870 393 aaKnown RBP17.83■□□□□ 0.45
PCDHB13-201ENST00000341948 LETM1O95202 739 aaPredicted RBP17.83■□□□□ 0.45
PCDHB13-201ENST00000341948 EIF2AK4Q9P2K8 1649 aaKnown RBP17.83■□□□□ 0.45
PCDHB13-201ENST00000341948 CRACR2BQ8N4Y2 399 aaPredicted RBP17.83■□□□□ 0.44
PCDHB13-201ENST00000341948 DCAF5Q96JK2 942 aa17.83■□□□□ 0.44
PCDHB13-201ENST00000341948 HOMER1Q86YM7 354 aa17.83■□□□□ 0.44
PCDHB13-201ENST00000341948 ST5P78524 1137 aa17.82■□□□□ 0.44
PCDHB13-201ENST00000341948 OLFM4Q6UX06 510 aa17.82■□□□□ 0.44
PCDHB13-201ENST00000341948 MAST1Q9Y2H9 1570 aa17.82■□□□□ 0.44
PCDHB13-201ENST00000341948 ZNF396Q96N95 335 aaPredicted RBP17.82■□□□□ 0.44
PCDHB13-201ENST00000341948 WDR33Q9C0J8 1336 aaKnown RBP17.82■□□□□ 0.44
PCDHB13-201ENST00000341948 CEBPZQ03701 1054 aaKnown RBP17.82■□□□□ 0.44
PCDHB13-201ENST00000341948 STK38Q15208 465 aa17.82■□□□□ 0.44
PCDHB13-201ENST00000341948 DDX17Q92841 729 aaKnown RBP17.82■□□□□ 0.44
PCDHB13-201ENST00000341948 CDK5RAP3Q96JB5 506 aa17.82■□□□□ 0.44
PCDHB13-201ENST00000341948 SIRT1Q96EB6 747 aa17.82■□□□□ 0.44
PCDHB13-201ENST00000341948 PDRG1Q9NUG6 133 aa17.82■□□□□ 0.44
PCDHB13-201ENST00000341948 MPHOSPH10O00566 681 aaKnown RBP17.81■□□□□ 0.44
PCDHB13-201ENST00000341948 NAPBQ9H115 298 aa17.81■□□□□ 0.44
PCDHB13-201ENST00000341948 ZNF287Q9HBT7 754 aa17.81■□□□□ 0.44
PCDHB13-201ENST00000341948 R3HCC1Q9Y3T6 440 aaKnown RBP17.81■□□□□ 0.44
PCDHB13-201ENST00000341948 MKNK2Q9HBH9 465 aa17.81■□□□□ 0.44
PCDHB13-201ENST00000341948 C8orf58Q8NAV2 365 aa17.81■□□□□ 0.44
PCDHB13-201ENST00000341948 U3KPZ7 1027 aaPredicted RBP17.8■□□□□ 0.44
PCDHB13-201ENST00000341948 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.8■□□□□ 0.44
PCDHB13-201ENST00000341948 POLR3AO14802 1390 aaPredicted RBP17.8■□□□□ 0.44
PCDHB13-201ENST00000341948 TXLNAP40222 546 aa17.8■□□□□ 0.44
PCDHB13-201ENST00000341948 NIP7Q9Y221 180 aaKnown RBP eCLIP17.8■□□□□ 0.44
PCDHB13-201ENST00000341948 CCDC152Q4G0S7 254 aa17.8■□□□□ 0.44
PCDHB13-201ENST00000341948 PHACTR3Q96KR7 559 aa17.8■□□□□ 0.44
PCDHB13-201ENST00000341948 CCDC70Q6NSX1 233 aa17.79■□□□□ 0.44
PCDHB13-201ENST00000341948 SNRKQ9NRH2 765 aa17.79■□□□□ 0.44
PCDHB13-201ENST00000341948 TFCP2L1Q9NZI6 479 aa17.79■□□□□ 0.44
PCDHB13-201ENST00000341948 ARHGEF12Q9NZN5 1544 aa17.79■□□□□ 0.44
PCDHB13-201ENST00000341948 NLRP3Q96P20 1036 aa17.79■□□□□ 0.44
PCDHB13-201ENST00000341948 CIZ1Q9ULV3 898 aaPredicted RBP17.79■□□□□ 0.44
PCDHB13-201ENST00000341948 CDKL5O76039 1030 aa17.78■□□□□ 0.44
PCDHB13-201ENST00000341948 PIBF1Q8WXW3 757 aa17.78■□□□□ 0.44
PCDHB13-201ENST00000341948 RTCBQ9Y3I0 505 aaKnown RBP17.78■□□□□ 0.44
PCDHB13-201ENST00000341948 FAM43AQ8N2R8 423 aa17.78■□□□□ 0.44
PCDHB13-201ENST00000341948 PCDH11XQ9BZA7 1347 aa17.78■□□□□ 0.44
PCDHB13-201ENST00000341948 PCDH11YQ9BZA8 1340 aa17.78■□□□□ 0.44
PCDHB13-201ENST00000341948 SLF2Q8IX21 1173 aa17.78■□□□□ 0.44
PCDHB13-201ENST00000341948 ECHDC1Q9NTX5 307 aa17.78■□□□□ 0.44
PCDHB13-201ENST00000341948 CFAP65Q6ZU64 1925 aaKnown RBP17.78■□□□□ 0.44
PCDHB13-201ENST00000341948 LARP1BQ659C4 914 aaKnown RBP17.78■□□□□ 0.44
PCDHB13-201ENST00000341948 KSR2Q6VAB6 950 aa17.78■□□□□ 0.44
PCDHB13-201ENST00000341948 DZIP3Q86Y13 1208 aaKnown RBP17.78■□□□□ 0.44
PCDHB13-201ENST00000341948 ZSCAN31Q96LW9 406 aaPredicted RBP17.78■□□□□ 0.44
PCDHB13-201ENST00000341948 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.77■□□□□ 0.44
PCDHB13-201ENST00000341948 JMYQ8N9B5 988 aa17.77■□□□□ 0.44
PCDHB13-201ENST00000341948 TSPY26PQ9H489 355 aa17.77■□□□□ 0.44
PCDHB13-201ENST00000341948 PARD3Q8TEW0 1356 aa17.77■□□□□ 0.44
PCDHB13-201ENST00000341948 PRPF40BQ6NWY9 871 aaKnown RBP17.77■□□□□ 0.43
PCDHB13-201ENST00000341948 MAP3K5Q99683 1374 aa17.77■□□□□ 0.43
PCDHB13-201ENST00000341948 KRT85P78386 507 aa17.76■□□□□ 0.43
PCDHB13-201ENST00000341948 CDCA7Q9BWT1 371 aaPredicted RBP17.76■□□□□ 0.43
PCDHB13-201ENST00000341948 CCDC39Q9UFE4 941 aa17.76■□□□□ 0.43
PCDHB13-201ENST00000341948 KRT18P05783 430 aaKnown RBP17.76■□□□□ 0.43
PCDHB13-201ENST00000341948 CASTP20810 708 aaKnown RBP17.76■□□□□ 0.43
PCDHB13-201ENST00000341948 ANKRD18AQ8IVF6 992 aa17.76■□□□□ 0.43
PCDHB13-201ENST00000341948 ARHGAP45Q92619 1136 aa17.76■□□□□ 0.43
PCDHB13-201ENST00000341948 GOLIM4O00461 696 aa17.76■□□□□ 0.43
PCDHB13-201ENST00000341948 RNMTO43148 476 aaKnown RBP17.76■□□□□ 0.43
PCDHB13-201ENST00000341948 HSP90AA2PQ14568 343 aaPredicted RBP17.75■□□□□ 0.43
PCDHB13-201ENST00000341948 TMEM132AQ24JP5 1023 aa17.75■□□□□ 0.43
PCDHB13-201ENST00000341948 MEIS3Q99687 375 aa17.75■□□□□ 0.43
PCDHB13-201ENST00000341948 TRIM5Q9C035 493 aa17.75■□□□□ 0.43
PCDHB13-201ENST00000341948 ZFYVE9O95405 1425 aa17.75■□□□□ 0.43
PCDHB13-201ENST00000341948 LDHCP07864 332 aa17.75■□□□□ 0.43
PCDHB13-201ENST00000341948 LMBR1LQ6UX01 489 aa17.75■□□□□ 0.43
PCDHB13-201ENST00000341948 GRM8O00222 908 aa17.74■□□□□ 0.43
PCDHB13-201ENST00000341948 NBPF14Q5TI25 921 aa17.74■□□□□ 0.43
PCDHB13-201ENST00000341948 ALDH1L1O75891 902 aa17.74■□□□□ 0.43
PCDHB13-201ENST00000341948 ZNF444Q8N0Y2 327 aaPredicted RBP17.74■□□□□ 0.43
PCDHB13-201ENST00000341948 MAGI3Q5TCQ9 1506 aa17.74■□□□□ 0.43
PCDHB13-201ENST00000341948 RANBP6O60518 1105 aaKnown RBP17.74■□□□□ 0.43
PCDHB13-201ENST00000341948 TPTE2Q6XPS3 522 aa17.74■□□□□ 0.43
PCDHB13-201ENST00000341948 CNKSR2Q8WXI2 1034 aa17.74■□□□□ 0.43
PCDHB13-201ENST00000341948 UPF3BQ9BZI7 483 aaKnown RBP17.74■□□□□ 0.43
PCDHB13-201ENST00000341948 PRM3Q9NNZ6 103 aa17.74■□□□□ 0.43
PCDHB13-201ENST00000341948 EDC4Q6P2E9 1401 aaKnown RBP17.74■□□□□ 0.43
PCDHB13-201ENST00000341948 ABCA8O94911 1581 aa17.73■□□□□ 0.43
PCDHB13-201ENST00000341948 TTLL12Q14166 644 aaPredicted RBP17.73■□□□□ 0.43
PCDHB13-201ENST00000341948 KRT24Q2M2I5 525 aa17.73■□□□□ 0.43
PCDHB13-201ENST00000341948 SKAP1Q86WV1 359 aa17.73■□□□□ 0.43
PCDHB13-201ENST00000341948 FAM98CQ17RN3 349 aaKnown RBP17.73■□□□□ 0.43
PCDHB13-201ENST00000341948 UTP14AQ9BVJ6 771 aaKnown RBP17.73■□□□□ 0.43
PCDHB13-201ENST00000341948 NOL7Q9UMY1 257 aaKnown RBP17.73■□□□□ 0.43
PCDHB13-201ENST00000341948 GPS2Q13227 327 aa17.72■□□□□ 0.43
PCDHB13-201ENST00000341948 ARHGEF10O15013 1369 aa17.72■□□□□ 0.43
PCDHB13-201ENST00000341948 ZNF213O14771 459 aa17.72■□□□□ 0.43
PCDHB13-201ENST00000341948 EPS15P42566 896 aa17.72■□□□□ 0.43
PCDHB13-201ENST00000341948 TTF1Q15361 905 aaPredicted RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms