RNA–Protein interactions for RNA: ENST00000341491.8

ATF3-202, Transcript of activating transcription factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATF3, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-202ENST00000341491 ADCY9O60503 1353 aa17.29■□□□□ 0.36
ATF3-202ENST00000341491 BCL9LQ86UU0 1499 aa17.29■□□□□ 0.36
ATF3-202ENST00000341491 SPATA31A5Q5VU36 1347 aa17.29■□□□□ 0.36
ATF3-202ENST00000341491 SPATA31A7Q8IWB4 1347 aa17.29■□□□□ 0.36
ATF3-202ENST00000341491 EP400Q96L91 3159 aa17.28■□□□□ 0.36
ATF3-202ENST00000341491 PI4KAP2A4QPH2 592 aa17.28■□□□□ 0.36
ATF3-202ENST00000341491 PI4KAP1Q8N8J0 262 aa17.28■□□□□ 0.36
ATF3-202ENST00000341491 PIGBQ92521 554 aa17.28■□□□□ 0.36
ATF3-202ENST00000341491 HOXB7P09629 217 aa17.28■□□□□ 0.36
ATF3-202ENST00000341491 FMNL2Q96PY5 1086 aa17.28■□□□□ 0.36
ATF3-202ENST00000341491 RWDD1Q9H446 243 aaPredicted RBP17.28■□□□□ 0.36
ATF3-202ENST00000341491 TMOD3Q9NYL9 352 aa17.28■□□□□ 0.36
ATF3-202ENST00000341491 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.27■□□□□ 0.36
ATF3-202ENST00000341491 ATP10DQ9P241 1426 aa17.27■□□□□ 0.36
ATF3-202ENST00000341491 EXOC5O00471 708 aa17.27■□□□□ 0.36
ATF3-202ENST00000341491 ERVV-2B6SEH9 535 aa17.26■□□□□ 0.35
ATF3-202ENST00000341491 DBF4Q9UBU7 674 aaPredicted RBP17.26■□□□□ 0.35
ATF3-202ENST00000341491 PLEKHG2Q9H7P9 1386 aa17.26■□□□□ 0.35
ATF3-202ENST00000341491 UNC5CLQ8IV45 518 aa17.26■□□□□ 0.35
ATF3-202ENST00000341491 SOS1Q07889 1333 aaPredicted RBP17.26■□□□□ 0.35
ATF3-202ENST00000341491 DDB1Q16531 1140 aa17.25■□□□□ 0.35
ATF3-202ENST00000341491 FAM182BQ5T319 152 aa17.25■□□□□ 0.35
ATF3-202ENST00000341491 MAP3K2Q9Y2U5 619 aa17.25■□□□□ 0.35
ATF3-202ENST00000341491 SNRPA1P09661 255 aaKnown RBP17.25■□□□□ 0.35
ATF3-202ENST00000341491 MEX3CQ5U5Q3 659 aaKnown RBP17.25■□□□□ 0.35
ATF3-202ENST00000341491 MARCH10Q8NA82 808 aaPredicted RBP17.25■□□□□ 0.35
ATF3-202ENST00000341491 APBB1O00213 710 aa17.24■□□□□ 0.35
ATF3-202ENST00000341491 A1BGP04217 495 aa17.24■□□□□ 0.35
ATF3-202ENST00000341491 PRIM1P49642 420 aaKnown RBP17.24■□□□□ 0.35
ATF3-202ENST00000341491 HDAC1Q13547 482 aaPredicted RBP17.24■□□□□ 0.35
ATF3-202ENST00000341491 CWF19L2Q2TBE0 894 aaKnown RBP17.24■□□□□ 0.35
ATF3-202ENST00000341491 XAGE3Q8WTP9 111 aa17.24■□□□□ 0.35
ATF3-202ENST00000341491 CCT4P50991 539 aaKnown RBP17.23■□□□□ 0.35
ATF3-202ENST00000341491 DNAAF4Q8WXU2 420 aa17.23■□□□□ 0.35
ATF3-202ENST00000341491 RBM42Q9BTD8 480 aaKnown RBP17.23■□□□□ 0.35
ATF3-202ENST00000341491 PDE4AP27815 886 aa17.23■□□□□ 0.35
ATF3-202ENST00000341491 AAMPQ13685 434 aa17.23■□□□□ 0.35
ATF3-202ENST00000341491 CEP85Q6P2H3 762 aa17.23■□□□□ 0.35
ATF3-202ENST00000341491 DDX21Q9NR30 783 aaKnown RBP eCLIP17.23■□□□□ 0.35
ATF3-202ENST00000341491 ATG3Q9NT62 314 aa17.23■□□□□ 0.35
ATF3-202ENST00000341491 USP21Q9UK80 565 aa17.23■□□□□ 0.35
ATF3-202ENST00000341491 ARFGEF2Q9Y6D5 1785 aa17.22■□□□□ 0.35
ATF3-202ENST00000341491 AFDNP55196 1824 aaKnown RBP17.22■□□□□ 0.35
ATF3-202ENST00000341491 COPS6Q7L5N1 327 aa17.22■□□□□ 0.35
ATF3-202ENST00000341491 LNPKQ9C0E8 428 aa17.22■□□□□ 0.35
ATF3-202ENST00000341491 ZNF330Q9Y3S2 320 aaPredicted RBP17.22■□□□□ 0.35
ATF3-202ENST00000341491 NBPF26B4DH59 902 aa17.21■□□□□ 0.35
ATF3-202ENST00000341491 NBPF14Q5TI25 921 aa17.21■□□□□ 0.35
ATF3-202ENST00000341491 NBPF10Q6P3W6 841 aaKnown RBP17.21■□□□□ 0.35
ATF3-202ENST00000341491 NBPF15Q8N660 670 aa17.21■□□□□ 0.35
ATF3-202ENST00000341491 LRRFIP2Q9Y608 721 aaKnown RBP17.21■□□□□ 0.35
ATF3-202ENST00000341491 BEND3Q5T5X7 828 aa17.21■□□□□ 0.35
ATF3-202ENST00000341491 LRP10Q7Z4F1 713 aa17.21■□□□□ 0.35
ATF3-202ENST00000341491 JARID2Q92833 1246 aaPredicted RBP17.21■□□□□ 0.35
ATF3-202ENST00000341491 USP44Q9H0E7 712 aa17.21■□□□□ 0.35
ATF3-202ENST00000341491 PXDNLA1KZ92 1463 aa17.2■□□□□ 0.34
ATF3-202ENST00000341491 KCNQ2O43526 872 aa17.2■□□□□ 0.34
ATF3-202ENST00000341491 NBPF7P0C2Y1 421 aaPredicted RBP17.2■□□□□ 0.34
ATF3-202ENST00000341491 DNAJC10Q8IXB1 793 aa17.2■□□□□ 0.34
ATF3-202ENST00000341491 SLC4A9Q96Q91 983 aa17.2■□□□□ 0.34
ATF3-202ENST00000341491 BCL9O00512 1426 aa17.2■□□□□ 0.34
ATF3-202ENST00000341491 PTF1AQ7RTS3 328 aa17.2■□□□□ 0.34
ATF3-202ENST00000341491 SRCIN1Q9C0H9 1055 aa17.2■□□□□ 0.34
ATF3-202ENST00000341491 HYPKQ9NX55 129 aa17.2■□□□□ 0.34
ATF3-202ENST00000341491 AFF2P51816 1311 aa17.19■□□□□ 0.34
ATF3-202ENST00000341491 SMC5Q8IY18 1101 aa17.19■□□□□ 0.34
ATF3-202ENST00000341491 SPATA31A6Q5VVP1 1343 aa17.19■□□□□ 0.34
ATF3-202ENST00000341491 PNMA6EA0A0J9YXQ4 647 aa17.18■□□□□ 0.34
ATF3-202ENST00000341491 ANKRD45Q5TZF3 282 aa17.18■□□□□ 0.34
ATF3-202ENST00000341491 TTLL7Q6ZT98 887 aa17.18■□□□□ 0.34
ATF3-202ENST00000341491 SMARCA5O60264 1052 aaPredicted RBP17.18■□□□□ 0.34
ATF3-202ENST00000341491 VPS72Q15906 364 aa17.18■□□□□ 0.34
ATF3-202ENST00000341491 KSR2Q6VAB6 950 aa17.18■□□□□ 0.34
ATF3-202ENST00000341491 RIC3Q7Z5B4 369 aa17.18■□□□□ 0.34
ATF3-202ENST00000341491 FNBP4Q8N3X1 1017 aaPredicted RBP17.18■□□□□ 0.34
ATF3-202ENST00000341491 ANKRD44Q8N8A2 993 aa17.18■□□□□ 0.34
ATF3-202ENST00000341491 THRAP3Q9Y2W1 955 aaKnown RBP17.18■□□□□ 0.34
ATF3-202ENST00000341491 MYD88Q99836 296 aa17.17■□□□□ 0.34
ATF3-202ENST00000341491 TJP1Q07157 1748 aa17.17■□□□□ 0.34
ATF3-202ENST00000341491 ATP5J2-PTCD1G3V325 749 aa17.16■□□□□ 0.34
ATF3-202ENST00000341491 NUP188Q5SRE5 1749 aa17.16■□□□□ 0.34
ATF3-202ENST00000341491 MSH5O43196 834 aa17.16■□□□□ 0.34
ATF3-202ENST00000341491 GNAI2P04899 355 aa17.16■□□□□ 0.34
ATF3-202ENST00000341491 UBTFL1P0CB47 393 aaPredicted RBP17.16■□□□□ 0.34
ATF3-202ENST00000341491 KCNQ4P56696 695 aa17.16■□□□□ 0.34
ATF3-202ENST00000341491 BARGINQ6ZT62 677 aa17.16■□□□□ 0.34
ATF3-202ENST00000341491 IGKV5-2P06315 115 aa17.15■□□□□ 0.34
ATF3-202ENST00000341491 CHMP4BQ9H444 224 aaKnown RBP17.15■□□□□ 0.34
ATF3-202ENST00000341491 ZBTB3Q9H5J0 574 aa17.15■□□□□ 0.34
ATF3-202ENST00000341491 EXOC6BQ9Y2D4 811 aa17.15■□□□□ 0.34
ATF3-202ENST00000341491 NUCB1Q02818 461 aa17.14■□□□□ 0.34
ATF3-202ENST00000341491 C8orf34Q49A92 452 aa17.14■□□□□ 0.33
ATF3-202ENST00000341491 NPM2Q86SE8 214 aaKnown RBP17.14■□□□□ 0.33
ATF3-202ENST00000341491 C16orf71Q8IYS4 520 aaPredicted RBP17.14■□□□□ 0.33
ATF3-202ENST00000341491 OTUD7AQ8TE49 926 aaPredicted RBP17.14■□□□□ 0.33
ATF3-202ENST00000341491 ARXQ96QS3 562 aa17.14■□□□□ 0.33
ATF3-202ENST00000341491 RTL5Q5HYW3 569 aaPredicted RBP17.13■□□□□ 0.33
ATF3-202ENST00000341491 CHD1LQ86WJ1 897 aa17.13■□□□□ 0.33
ATF3-202ENST00000341491 CDCA7Q9BWT1 371 aaPredicted RBP17.13■□□□□ 0.33
ATF3-202ENST00000341491 BACH2Q9BYV9 841 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms