RNA–Protein interactions for RNA: ENST00000341290.6

PERM1-201, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PERM1, Length 3,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-201ENST00000341290 HAP1P54257 671 aaPredicted RBP18.59■□□□□ 0.57
PERM1-201ENST00000341290 MPNDQ8N594 471 aa18.59■□□□□ 0.57
PERM1-201ENST00000341290 TPM2P07951 284 aa18.59■□□□□ 0.57
PERM1-201ENST00000341290 XPCQ01831 940 aaPredicted RBP18.59■□□□□ 0.57
PERM1-201ENST00000341290 UNC5CLQ8IV45 518 aa18.59■□□□□ 0.57
PERM1-201ENST00000341290 IL1RAPL2Q9NP60 686 aa18.59■□□□□ 0.57
PERM1-201ENST00000341290 NUTM2GQ5VZR2 741 aa18.58■□□□□ 0.57
PERM1-201ENST00000341290 SLAIN2Q9P270 581 aa18.58■□□□□ 0.57
PERM1-201ENST00000341290 GNAI2P04899 355 aa18.58■□□□□ 0.56
PERM1-201ENST00000341290 CERKQ8TCT0 537 aa18.58■□□□□ 0.56
PERM1-201ENST00000341290 LARP6Q9BRS8 491 aaKnown RBP18.58■□□□□ 0.56
PERM1-201ENST00000341290 RBM33Q96EV2 1170 aaKnown RBP18.58■□□□□ 0.56
PERM1-201ENST00000341290 SOS2Q07890 1332 aaPredicted RBP18.57■□□□□ 0.56
PERM1-201ENST00000341290 MX1P20591 662 aa18.57■□□□□ 0.56
PERM1-201ENST00000341290 BRINP3Q76B58 766 aa18.57■□□□□ 0.56
PERM1-201ENST00000341290 ESYT1Q9BSJ8 1104 aa18.57■□□□□ 0.56
PERM1-201ENST00000341290 LRRCC1Q9C099 1032 aa18.57■□□□□ 0.56
PERM1-201ENST00000341290 STK31Q9BXU1 1019 aa18.56■□□□□ 0.56
PERM1-201ENST00000341290 FAM13BQ9NYF5 915 aa18.56■□□□□ 0.56
PERM1-201ENST00000341290 R3HCC1Q9Y3T6 440 aaKnown RBP18.56■□□□□ 0.56
PERM1-201ENST00000341290 KIAA0232Q92628 1395 aa18.56■□□□□ 0.56
PERM1-201ENST00000341290 IBTKQ9P2D0 1353 aaPredicted RBP18.56■□□□□ 0.56
PERM1-201ENST00000341290 NFAT5O94916 1531 aa18.56■□□□□ 0.56
PERM1-201ENST00000341290 CRB1P82279 1406 aa18.56■□□□□ 0.56
PERM1-201ENST00000341290 C14orf37Q86TY3 774 aa18.56■□□□□ 0.56
PERM1-201ENST00000341290 IL25Q9H293 177 aa18.56■□□□□ 0.56
PERM1-201ENST00000341290 CCT4P50991 539 aaKnown RBP18.55■□□□□ 0.56
PERM1-201ENST00000341290 LTV1Q96GA3 475 aaPredicted RBP18.55■□□□□ 0.56
PERM1-201ENST00000341290 LRRFIP2Q9Y608 721 aaKnown RBP18.55■□□□□ 0.56
PERM1-201ENST00000341290 NUTM1Q86Y26 1132 aa18.55■□□□□ 0.56
PERM1-201ENST00000341290 TNS3Q68CZ2 1445 aa18.54■□□□□ 0.56
PERM1-201ENST00000341290 FLIIQ13045 1269 aa18.54■□□□□ 0.56
PERM1-201ENST00000341290 AMPHP49418 695 aa18.54■□□□□ 0.56
PERM1-201ENST00000341290 ORAI2Q96SN7 254 aa18.53■□□□□ 0.56
PERM1-201ENST00000341290 LTN1O94822 1766 aa18.53■□□□□ 0.56
PERM1-201ENST00000341290 NPHP3Q7Z494 1330 aa18.53■□□□□ 0.56
PERM1-201ENST00000341290 CHMLP26374 656 aa18.53■□□□□ 0.56
PERM1-201ENST00000341290 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.53■□□□□ 0.56
PERM1-201ENST00000341290 EYA1Q99502 592 aa18.52■□□□□ 0.56
PERM1-201ENST00000341290 COL18A1P39060 1754 aa18.52■□□□□ 0.56
PERM1-201ENST00000341290 LRSAM1Q6UWE0 723 aa18.52■□□□□ 0.56
PERM1-201ENST00000341290 OSBPL3Q9H4L5 887 aa18.52■□□□□ 0.56
PERM1-201ENST00000341290 RGPD1P0DJD0 1748 aa18.52■□□□□ 0.55
PERM1-201ENST00000341290 GADD45BO75293 160 aaPredicted RBP18.52■□□□□ 0.55
PERM1-201ENST00000341290 PEAK1Q9H792 1746 aa18.51■□□□□ 0.55
PERM1-201ENST00000341290 OFD1O75665 1012 aa18.51■□□□□ 0.55
PERM1-201ENST00000341290 MCCP23508 829 aa18.5■□□□□ 0.55
PERM1-201ENST00000341290 ESCO1Q5FWF5 840 aa18.5■□□□□ 0.55
PERM1-201ENST00000341290 BRD1O95696 1058 aa18.49■□□□□ 0.55
PERM1-201ENST00000341290 PRDM10Q9NQV6 1147 aa18.49■□□□□ 0.55
PERM1-201ENST00000341290 ZHX1Q9UKY1 873 aaPredicted RBP18.49■□□□□ 0.55
PERM1-201ENST00000341290 CAMTA1Q9Y6Y1 1673 aa18.49■□□□□ 0.55
PERM1-201ENST00000341290 NGDNQ8NEJ9 315 aaKnown RBP18.49■□□□□ 0.55
PERM1-201ENST00000341290 TOM1O60784 492 aa18.49■□□□□ 0.55
PERM1-201ENST00000341290 USHBP1Q8N6Y0 703 aa18.49■□□□□ 0.55
PERM1-201ENST00000341290 PHAXQ9H814 394 aaKnown RBP18.49■□□□□ 0.55
PERM1-201ENST00000341290 NOL7Q9UMY1 257 aaKnown RBP18.49■□□□□ 0.55
PERM1-201ENST00000341290 ARHGEF10O15013 1369 aa18.48■□□□□ 0.55
PERM1-201ENST00000341290 ATP8B2P98198 1209 aa18.48■□□□□ 0.55
PERM1-201ENST00000341290 SALL3Q9BXA9 1300 aa18.48■□□□□ 0.55
PERM1-201ENST00000341290 EIF2S2P20042 333 aaKnown RBP18.48■□□□□ 0.55
PERM1-201ENST00000341290 FGD1P98174 961 aa18.48■□□□□ 0.55
PERM1-201ENST00000341290 PSME1Q06323 249 aa18.48■□□□□ 0.55
PERM1-201ENST00000341290 PDLIM2Q96JY6 352 aa18.48■□□□□ 0.55
PERM1-201ENST00000341290 FAM208AQ9UK61 1670 aaKnown RBP18.47■□□□□ 0.55
PERM1-201ENST00000341290 SPATA31A3Q5VYP0 1347 aa18.47■□□□□ 0.55
PERM1-201ENST00000341290 PTMAP06454 111 aaKnown RBP18.47■□□□□ 0.55
PERM1-201ENST00000341290 GNAI3P08754 354 aa18.47■□□□□ 0.55
PERM1-201ENST00000341290 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.47■□□□□ 0.55
PERM1-201ENST00000341290 LMO7Q8WWI1 1683 aa18.47■□□□□ 0.55
PERM1-201ENST00000341290 SURF6O75683 361 aaKnown RBP18.47■□□□□ 0.55
PERM1-201ENST00000341290 CCDC30Q5VVM6 783 aa18.47■□□□□ 0.55
PERM1-201ENST00000341290 USP44Q9H0E7 712 aa18.47■□□□□ 0.55
PERM1-201ENST00000341290 CPA1P15085 419 aa18.46■□□□□ 0.55
PERM1-201ENST00000341290 UBTFL1P0CB47 393 aaPredicted RBP18.46■□□□□ 0.55
PERM1-201ENST00000341290 USP48Q86UV5 1035 aa18.45■□□□□ 0.54
PERM1-201ENST00000341290 CUL4AQ13619 759 aa18.45■□□□□ 0.54
PERM1-201ENST00000341290 KRT28Q7Z3Y7 464 aa18.45■□□□□ 0.54
PERM1-201ENST00000341290 ZNF830Q96NB3 372 aaPredicted RBP18.45■□□□□ 0.54
PERM1-201ENST00000341290 DDX54Q8TDD1 881 aaKnown RBP18.44■□□□□ 0.54
PERM1-201ENST00000341290 MBD3O95983 291 aa18.44■□□□□ 0.54
PERM1-201ENST00000341290 ANXA1P04083 346 aa18.44■□□□□ 0.54
PERM1-201ENST00000341290 NLRP6P59044 892 aa18.44■□□□□ 0.54
PERM1-201ENST00000341290 IL17REQ8NFR9 667 aa18.44■□□□□ 0.54
PERM1-201ENST00000341290 ZKSCAN5Q9Y2L8 839 aa18.44■□□□□ 0.54
PERM1-201ENST00000341290 PPP1R42Q7Z4L9 355 aa18.44■□□□□ 0.54
PERM1-201ENST00000341290 TSPY26PQ9H489 355 aa18.44■□□□□ 0.54
PERM1-201ENST00000341290 SPG7Q9UQ90 795 aa18.44■□□□□ 0.54
PERM1-201ENST00000341290 GNAT3A8MTJ3 354 aa18.43■□□□□ 0.54
PERM1-201ENST00000341290 MCM2P49736 904 aa18.43■□□□□ 0.54
PERM1-201ENST00000341290 HDGFL1Q5TGJ6 251 aa18.42■□□□□ 0.54
PERM1-201ENST00000341290 CWC27Q6UX04 472 aaKnown RBP18.42■□□□□ 0.54
PERM1-201ENST00000341290 CNPY2Q9Y2B0 182 aa18.42■□□□□ 0.54
PERM1-201ENST00000341290 UQCRHLA0A096LP55 91 aa18.41■□□□□ 0.54
PERM1-201ENST00000341290 SRGAP3O43295 1099 aa18.41■□□□□ 0.54
PERM1-201ENST00000341290 UQCRHP07919 91 aa18.41■□□□□ 0.54
PERM1-201ENST00000341290 NBPF7P0C2Y1 421 aaPredicted RBP18.41■□□□□ 0.54
PERM1-201ENST00000341290 PLCB2Q00722 1185 aa18.41■□□□□ 0.54
PERM1-201ENST00000341290 RASEFQ8IZ41 740 aa18.41■□□□□ 0.54
PERM1-201ENST00000341290 SRCIN1Q9C0H9 1055 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms