RNA–Protein interactions for RNA: ENST00000341165.10

NBR1-201, Transcript of NBR1, autophagy cargo receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NBR1, Length 4,656 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBR1-201ENST00000341165 NBPF6Q5VWK0 638 aa9.67□□□□□ -0.86
NBR1-201ENST00000341165 ANKRD24Q8TF21 1146 aa9.67□□□□□ -0.86
NBR1-201ENST00000341165 NBPF4Q96M43 638 aa9.67□□□□□ -0.86
NBR1-201ENST00000341165 SRGAP3O43295 1099 aa9.67□□□□□ -0.86
NBR1-201ENST00000341165 ALDH1L1O75891 902 aa9.67□□□□□ -0.86
NBR1-201ENST00000341165 CSB-PGBD3P0DP91 1061 aa9.67□□□□□ -0.86
NBR1-201ENST00000341165 EIF4A1P60842 406 aaKnown RBP9.67□□□□□ -0.86
NBR1-201ENST00000341165 KRT28Q7Z3Y7 464 aa9.67□□□□□ -0.86
NBR1-201ENST00000341165 HYPKQ9NX55 129 aa9.67□□□□□ -0.86
NBR1-201ENST00000341165 NCAPD2Q15021 1401 aa9.67□□□□□ -0.86
NBR1-201ENST00000341165 SPG7Q9UQ90 795 aa9.67□□□□□ -0.86
NBR1-201ENST00000341165 PIK3C2AO00443 1686 aa9.67□□□□□ -0.86
NBR1-201ENST00000341165 NCOA3Q9Y6Q9 1424 aa9.66□□□□□ -0.86
NBR1-201ENST00000341165 IBTKQ9P2D0 1353 aaPredicted RBP9.66□□□□□ -0.86
NBR1-201ENST00000341165 TATP17735 454 aaPredicted RBP9.66□□□□□ -0.86
NBR1-201ENST00000341165 CLASRPQ8N2M8 674 aaKnown RBP9.66□□□□□ -0.86
NBR1-201ENST00000341165 OTUD7AQ8TE49 926 aaPredicted RBP9.66□□□□□ -0.86
NBR1-201ENST00000341165 ZHX1Q9UKY1 873 aaPredicted RBP9.66□□□□□ -0.86
NBR1-201ENST00000341165 RNMTO43148 476 aaKnown RBP9.66□□□□□ -0.86
NBR1-201ENST00000341165 DDX49Q9Y6V7 483 aaKnown RBP9.66□□□□□ -0.86
NBR1-201ENST00000341165 MPRIPQ6WCQ1 1025 aa9.66□□□□□ -0.86
NBR1-201ENST00000341165 PPP1R42Q7Z4L9 355 aa9.66□□□□□ -0.86
NBR1-201ENST00000341165 ESYT1Q9BSJ8 1104 aa9.66□□□□□ -0.86
NBR1-201ENST00000341165 NEK4P51957 841 aa9.65□□□□□ -0.86
NBR1-201ENST00000341165 C19orf44Q9H6X5 657 aa9.65□□□□□ -0.86
NBR1-201ENST00000341165 CHPF2Q9P2E5 772 aa9.65□□□□□ -0.86
NBR1-201ENST00000341165 STAP2Q9UGK3 403 aa9.65□□□□□ -0.86
NBR1-201ENST00000341165 IFIT2P09913 472 aaKnown RBP9.65□□□□□ -0.86
NBR1-201ENST00000341165 HOMEZQ8IX15 550 aa9.65□□□□□ -0.86
NBR1-201ENST00000341165 SSH3Q8TE77 659 aa9.65□□□□□ -0.86
NBR1-201ENST00000341165 PI4KAP2A4QPH2 592 aa9.65□□□□□ -0.86
NBR1-201ENST00000341165 PI4KAP1Q8N8J0 262 aa9.65□□□□□ -0.86
NBR1-201ENST00000341165 DIAPH3Q9NSV4 1193 aa9.65□□□□□ -0.86
NBR1-201ENST00000341165 G3BP1Q13283 466 aaKnown RBP eCLIP9.65□□□□□ -0.872e-7■■■□□ 17.2
NBR1-201ENST00000341165 ARHGEF25Q86VW2 580 aa9.65□□□□□ -0.87
NBR1-201ENST00000341165 TTC5Q8N0Z6 440 aa9.65□□□□□ -0.87
NBR1-201ENST00000341165 USP44Q9H0E7 712 aa9.65□□□□□ -0.87
NBR1-201ENST00000341165 HIP1O00291 1037 aa9.64□□□□□ -0.87
NBR1-201ENST00000341165 FAM43AQ8N2R8 423 aa9.64□□□□□ -0.87
NBR1-201ENST00000341165 KIF2CQ99661 725 aa9.64□□□□□ -0.87
NBR1-201ENST00000341165 RBM42Q9BTD8 480 aaKnown RBP9.64□□□□□ -0.87
NBR1-201ENST00000341165 NLRP2Q9NX02 1062 aa9.64□□□□□ -0.87
NBR1-201ENST00000341165 CEMIPQ8WUJ3 1361 aa9.64□□□□□ -0.87
NBR1-201ENST00000341165 GLRX3O76003 335 aaKnown RBP9.64□□□□□ -0.87
NBR1-201ENST00000341165 RHPN1Q8TCX5 695 aa9.64□□□□□ -0.87
NBR1-201ENST00000341165 PHAXQ9H814 394 aaKnown RBP9.64□□□□□ -0.87
NBR1-201ENST00000341165 PNMA6EA0A0J9YXQ4 647 aa9.64□□□□□ -0.87
NBR1-201ENST00000341165 KSR2Q6VAB6 950 aa9.64□□□□□ -0.87
NBR1-201ENST00000341165 RBM33Q96EV2 1170 aaKnown RBP9.64□□□□□ -0.87
NBR1-201ENST00000341165 LGR6Q9HBX8 967 aa9.64□□□□□ -0.87
NBR1-201ENST00000341165 RIC3Q7Z5B4 369 aa9.63□□□□□ -0.87
NBR1-201ENST00000341165 LRRC59Q96AG4 307 aaKnown RBP9.63□□□□□ -0.87
NBR1-201ENST00000341165 IL1RAPL2Q9NP60 686 aa9.63□□□□□ -0.87
NBR1-201ENST00000341165 TTC41PQ6P2S7 1318 aa9.63□□□□□ -0.87
NBR1-201ENST00000341165 CHMLP26374 656 aa9.63□□□□□ -0.87
NBR1-201ENST00000341165 SYAP1Q96A49 352 aaPredicted RBP9.63□□□□□ -0.87
NBR1-201ENST00000341165 OVOS2A0A0G2JMS6 1433 aa9.63□□□□□ -0.87
NBR1-201ENST00000341165 PLCB2Q00722 1185 aa9.63□□□□□ -0.87
NBR1-201ENST00000341165 XPCQ01831 940 aaPredicted RBP9.63□□□□□ -0.87
NBR1-201ENST00000341165 DDIT3P35638 169 aa9.62□□□□□ -0.87
NBR1-201ENST00000341165 CHAF1AQ13111 956 aaPredicted RBP9.62□□□□□ -0.87
NBR1-201ENST00000341165 MCTP1Q6DN14 999 aa9.62□□□□□ -0.87
NBR1-201ENST00000341165 LARP1Q6PKG0 1096 aaKnown RBP9.62□□□□□ -0.87
NBR1-201ENST00000341165 SSFA2P28290 1259 aa9.62□□□□□ -0.87
NBR1-201ENST00000341165 KCNJ4P48050 445 aa9.62□□□□□ -0.87
NBR1-201ENST00000341165 ORAI2Q96SN7 254 aa9.62□□□□□ -0.87
NBR1-201ENST00000341165 MAP3K2Q9Y2U5 619 aa9.62□□□□□ -0.87
NBR1-201ENST00000341165 BEND3Q5T5X7 828 aa9.62□□□□□ -0.87
NBR1-201ENST00000341165 NUTM1Q86Y26 1132 aa9.62□□□□□ -0.87
NBR1-201ENST00000341165 GRPEL1Q9HAV7 217 aa9.62□□□□□ -0.87
NBR1-201ENST00000341165 BAG4O95429 457 aaKnown RBP9.62□□□□□ -0.87
NBR1-201ENST00000341165 BRD2P25440 801 aaKnown RBP9.61□□□□□ -0.87
NBR1-201ENST00000341165 POLA2Q14181 598 aa9.61□□□□□ -0.87
NBR1-201ENST00000341165 KLHL40Q2TBA0 621 aa9.61□□□□□ -0.87
NBR1-201ENST00000341165 LINS1Q8NG48 757 aa9.61□□□□□ -0.87
NBR1-201ENST00000341165 PRDM10Q9NQV6 1147 aa9.61□□□□□ -0.87
NBR1-201ENST00000341165 USP54Q70EL1 1684 aa9.61□□□□□ -0.87
NBR1-201ENST00000341165 RGPD8O14715 1765 aaPredicted RBP9.61□□□□□ -0.87
NBR1-201ENST00000341165 MBD3O95983 291 aa9.61□□□□□ -0.87
NBR1-201ENST00000341165 ZKSCAN1P17029 563 aaPredicted RBP9.61□□□□□ -0.87
NBR1-201ENST00000341165 IFNL2Q8IZJ0 200 aa9.61□□□□□ -0.87
NBR1-201ENST00000341165 INTS4Q96HW7 963 aaKnown RBP9.61□□□□□ -0.87
NBR1-201ENST00000341165 ATP6V1DQ9Y5K8 247 aa9.61□□□□□ -0.87
NBR1-201ENST00000341165 CLEC17AQ6ZS10 378 aa9.6□□□□□ -0.87
NBR1-201ENST00000341165 CADPS2Q86UW7 1296 aa9.6□□□□□ -0.87
NBR1-201ENST00000341165 DDX21Q9NR30 783 aaKnown RBP eCLIP9.6□□□□□ -0.87
NBR1-201ENST00000341165 GIGYF1O75420 1035 aaPredicted RBP9.6□□□□□ -0.87
NBR1-201ENST00000341165 ZC3H6P61129 1189 aaKnown RBP9.6□□□□□ -0.87
NBR1-201ENST00000341165 CSPP1Q1MSJ5 1256 aa9.6□□□□□ -0.87
NBR1-201ENST00000341165 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.6□□□□□ -0.87
NBR1-201ENST00000341165 NPHP3Q7Z494 1330 aa9.6□□□□□ -0.87
NBR1-201ENST00000341165 LRRC37A3O60309 1634 aa9.6□□□□□ -0.87
NBR1-201ENST00000341165 AIMP1Q12904 312 aaKnown RBP9.6□□□□□ -0.87
NBR1-201ENST00000341165 ECHDC1Q9NTX5 307 aa9.6□□□□□ -0.87
NBR1-201ENST00000341165 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.6□□□□□ -0.871e-7■□□□□ 10.8
NBR1-201ENST00000341165 PHF14O94880 888 aa9.59□□□□□ -0.87
NBR1-201ENST00000341165 CD2BP2O95400 341 aaKnown RBP9.59□□□□□ -0.87
NBR1-201ENST00000341165 FSD2A1L4K1 749 aa9.59□□□□□ -0.87
NBR1-201ENST00000341165 RNF20Q5VTR2 975 aa9.59□□□□□ -0.87
NBR1-201ENST00000341165 TSHZ3Q63HK5 1081 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms