RNA–Protein interactions for RNA: ENST00000341062.6

TRIM60-201, Transcript of tripartite motif containing 60, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TRIM60, Length 1,867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60-201ENST00000341062 RBM6P78332 1123 aaKnown RBP16.81■□□□□ 0.28
TRIM60-201ENST00000341062 INTS3Q68E01 1043 aaKnown RBP16.81■□□□□ 0.28
TRIM60-201ENST00000341062 PTPRCP08575 1304 aa16.8■□□□□ 0.28
TRIM60-201ENST00000341062 HTATSF1O43719 755 aaKnown RBP16.8■□□□□ 0.28
TRIM60-201ENST00000341062 ACSBG1Q96GR2 724 aa16.8■□□□□ 0.28
TRIM60-201ENST00000341062 KCNQ3O43525 872 aa16.79■□□□□ 0.28
TRIM60-201ENST00000341062 RXRBP28702 533 aa16.78■□□□□ 0.28
TRIM60-201ENST00000341062 NFKBIBQ15653 356 aa16.78■□□□□ 0.28
TRIM60-201ENST00000341062 KRT24Q2M2I5 525 aa16.78■□□□□ 0.28
TRIM60-201ENST00000341062 SIRT2Q8IXJ6 389 aa16.78■□□□□ 0.28
TRIM60-201ENST00000341062 RTF1Q92541 710 aaKnown RBP16.78■□□□□ 0.28
TRIM60-201ENST00000341062 CDCA7Q9BWT1 371 aaPredicted RBP16.78■□□□□ 0.28
TRIM60-201ENST00000341062 KCNQ2O43526 872 aa16.78■□□□□ 0.28
TRIM60-201ENST00000341062 NKX1-1Q15270 411 aaPredicted RBP16.78■□□□□ 0.28
TRIM60-201ENST00000341062 NFATC2IPQ8NCF5 419 aa16.78■□□□□ 0.28
TRIM60-201ENST00000341062 BMP2KLQ5H9B9 411 aa16.77■□□□□ 0.27
TRIM60-201ENST00000341062 LNPKQ9C0E8 428 aa16.77■□□□□ 0.27
TRIM60-201ENST00000341062 SBF2Q86WG5 1849 aa16.77■□□□□ 0.27
TRIM60-201ENST00000341062 SLC39A6Q13433 755 aa16.76■□□□□ 0.27
TRIM60-201ENST00000341062 PLEKHG2Q9H7P9 1386 aa16.76■□□□□ 0.27
TRIM60-201ENST00000341062 DCAF5Q96JK2 942 aa16.76■□□□□ 0.27
TRIM60-201ENST00000341062 N4BP2Q86UW6 1770 aaPredicted RBP16.75■□□□□ 0.27
TRIM60-201ENST00000341062 MRC1P22897 1456 aa16.75■□□□□ 0.27
TRIM60-201ENST00000341062 ATP10DQ9P241 1426 aa16.75■□□□□ 0.27
TRIM60-201ENST00000341062 KDM3BQ7LBC6 1761 aa16.75■□□□□ 0.27
TRIM60-201ENST00000341062 C22orf23Q9BZE7 217 aa16.75■□□□□ 0.27
TRIM60-201ENST00000341062 C1orf115Q9H7X2 142 aa16.75■□□□□ 0.27
TRIM60-201ENST00000341062 PRIM1P49642 420 aaKnown RBP16.74■□□□□ 0.27
TRIM60-201ENST00000341062 SLC52A2Q9HAB3 445 aa16.74■□□□□ 0.27
TRIM60-201ENST00000341062 ANKRD45Q5TZF3 282 aa16.73■□□□□ 0.27
TRIM60-201ENST00000341062 SOS1Q07889 1333 aaPredicted RBP16.73■□□□□ 0.27
TRIM60-201ENST00000341062 PIGBQ92521 554 aa16.73■□□□□ 0.27
TRIM60-201ENST00000341062 SYTL4Q96C24 671 aaPredicted RBP16.72■□□□□ 0.27
TRIM60-201ENST00000341062 DCTPP1Q9H773 170 aa16.72■□□□□ 0.27
TRIM60-201ENST00000341062 BABAM1Q9NWV8 329 aa16.72■□□□□ 0.27
TRIM60-201ENST00000341062 TSPYL4Q9UJ04 414 aa16.72■□□□□ 0.27
TRIM60-201ENST00000341062 TEFQ10587 303 aa16.71■□□□□ 0.27
TRIM60-201ENST00000341062 KRT27Q7Z3Y8 459 aa16.71■□□□□ 0.27
TRIM60-201ENST00000341062 RPAP2Q8IXW5 612 aaPredicted RBP16.71■□□□□ 0.27
TRIM60-201ENST00000341062 ANKRD44Q8N8A2 993 aa16.71■□□□□ 0.27
TRIM60-201ENST00000341062 TBC1D2Q9BYX2 928 aa16.71■□□□□ 0.27
TRIM60-201ENST00000341062 PRAMEF22A3QJZ6 481 aa16.71■□□□□ 0.27
TRIM60-201ENST00000341062 RBM25P49756 843 aaKnown RBP16.71■□□□□ 0.27
TRIM60-201ENST00000341062 MFAP1P55081 439 aaKnown RBP16.71■□□□□ 0.27
TRIM60-201ENST00000341062 CABP4P57796 275 aa16.71■□□□□ 0.27
TRIM60-201ENST00000341062 TAF7Q15545 349 aaPredicted RBP16.71■□□□□ 0.27
TRIM60-201ENST00000341062 ASAP1Q9ULH1 1129 aa16.71■□□□□ 0.27
TRIM60-201ENST00000341062 ANTXR1Q9H6X2 564 aa16.7■□□□□ 0.26
TRIM60-201ENST00000341062 PAPPAQ13219 1627 aa16.7■□□□□ 0.26
TRIM60-201ENST00000341062 BCL9O00512 1426 aa16.7■□□□□ 0.26
TRIM60-201ENST00000341062 BTBD11A6QL63 1104 aa16.69■□□□□ 0.26
TRIM60-201ENST00000341062 SLC4A2P04920 1241 aa16.69■□□□□ 0.26
TRIM60-201ENST00000341062 BTAF1O14981 1849 aa16.69■□□□□ 0.26
TRIM60-201ENST00000341062 ERVV-2B6SEH9 535 aa16.69■□□□□ 0.26
TRIM60-201ENST00000341062 HSP90AB1P08238 724 aaKnown RBP16.69■□□□□ 0.26
TRIM60-201ENST00000341062 C5P01031 1676 aa16.68■□□□□ 0.26
TRIM60-201ENST00000341062 NHSQ6T4R5 1651 aa16.68■□□□□ 0.26
TRIM60-201ENST00000341062 UBR2Q8IWV8 1755 aa16.68■□□□□ 0.26
TRIM60-201ENST00000341062 CEP85Q6P2H3 762 aa16.67■□□□□ 0.26
TRIM60-201ENST00000341062 KCPQ6ZWJ8 1503 aa16.67■□□□□ 0.26
TRIM60-201ENST00000341062 CCT4P50991 539 aaKnown RBP16.67■□□□□ 0.26
TRIM60-201ENST00000341062 ATG3Q9NT62 314 aa16.67■□□□□ 0.26
TRIM60-201ENST00000341062 TMOD3Q9NYL9 352 aa16.67■□□□□ 0.26
TRIM60-201ENST00000341062 EIF5BO60841 1220 aaKnown RBP16.66■□□□□ 0.26
TRIM60-201ENST00000341062 SLC4A9Q96Q91 983 aa16.66■□□□□ 0.26
TRIM60-201ENST00000341062 KCNQ4P56696 695 aa16.65■□□□□ 0.26
TRIM60-201ENST00000341062 EIF4A1P60842 406 aaKnown RBP16.65■□□□□ 0.26
TRIM60-201ENST00000341062 ZNF790Q6PG37 636 aa16.65■□□□□ 0.26
TRIM60-201ENST00000341062 ZNF496Q96IT1 587 aaPredicted RBP16.65■□□□□ 0.26
TRIM60-201ENST00000341062 PXDNLA1KZ92 1463 aa16.65■□□□□ 0.26
TRIM60-201ENST00000341062 PTCD1O75127 700 aaKnown RBP16.65■□□□□ 0.26
TRIM60-201ENST00000341062 FRAT2O75474 233 aaPredicted RBP16.65■□□□□ 0.26
TRIM60-201ENST00000341062 TRIM37O94972 964 aa16.65■□□□□ 0.26
TRIM60-201ENST00000341062 PLEKHM2Q8IWE5 1019 aa16.65■□□□□ 0.26
TRIM60-201ENST00000341062 STK31Q9BXU1 1019 aa16.65■□□□□ 0.26
TRIM60-201ENST00000341062 CCDC30Q5VVM6 783 aa16.64■□□□□ 0.25
TRIM60-201ENST00000341062 MEIS3Q99687 375 aa16.64■□□□□ 0.25
TRIM60-201ENST00000341062 G2E3Q7L622 706 aa16.63■□□□□ 0.25
TRIM60-201ENST00000341062 NECTIN2Q92692 538 aa16.63■□□□□ 0.25
TRIM60-201ENST00000341062 SNX21Q969T3 373 aa16.63■□□□□ 0.25
TRIM60-201ENST00000341062 TBC1D9Q6ZT07 1266 aa16.63■□□□□ 0.25
TRIM60-201ENST00000341062 HMMRO75330 724 aa16.62■□□□□ 0.25
TRIM60-201ENST00000341062 CDC45O75419 566 aa16.62■□□□□ 0.25
TRIM60-201ENST00000341062 GSE1Q14687 1217 aa16.62■□□□□ 0.25
TRIM60-201ENST00000341062 SLKQ9H2G2 1235 aaPredicted RBP16.62■□□□□ 0.25
TRIM60-201ENST00000341062 HEG1Q9ULI3 1381 aa16.61■□□□□ 0.25
TRIM60-201ENST00000341062 TNS1Q9HBL0 1735 aaKnown RBP16.61■□□□□ 0.25
TRIM60-201ENST00000341062 PIP4K2AP48426 406 aaPredicted RBP16.61■□□□□ 0.25
TRIM60-201ENST00000341062 TTC22Q5TAA0 569 aa16.61■□□□□ 0.25
TRIM60-201ENST00000341062 TJP1Q07157 1748 aa16.6■□□□□ 0.25
TRIM60-201ENST00000341062 GSPT1P15170 499 aaKnown RBP16.6■□□□□ 0.25
TRIM60-201ENST00000341062 FLIIQ13045 1269 aa16.6■□□□□ 0.25
TRIM60-201ENST00000341062 FAM196AQ6ZSG2 479 aa16.6■□□□□ 0.25
TRIM60-201ENST00000341062 HSCBQ8IWL3 235 aa16.6■□□□□ 0.25
TRIM60-201ENST00000341062 TUBGCP6Q96RT7 1819 aa16.59■□□□□ 0.25
TRIM60-201ENST00000341062 RBM42Q9BTD8 480 aaKnown RBP16.59■□□□□ 0.25
TRIM60-201ENST00000341062 USP16Q9Y5T5 823 aa16.59■□□□□ 0.25
TRIM60-201ENST00000341062 F6X3S4 739 aa16.59■□□□□ 0.25
TRIM60-201ENST00000341062 GIGYF1O75420 1035 aaPredicted RBP16.59■□□□□ 0.25
TRIM60-201ENST00000341062 ANXA1P04083 346 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms