RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 EPB41L2O43491 1005 aaKnown RBP17.76■□□□□ 0.43
TDP2-201ENST00000341060 EIF2S2P20042 333 aaKnown RBP17.76■□□□□ 0.43
TDP2-201ENST00000341060 MCTP1Q6DN14 999 aa17.76■□□□□ 0.43
TDP2-201ENST00000341060 PPP1R42Q7Z4L9 355 aa17.76■□□□□ 0.43
TDP2-201ENST00000341060 CHPF2Q9P2E5 772 aa17.76■□□□□ 0.43
TDP2-201ENST00000341060 TRPM3Q9HCF6 1732 aaPredicted RBP17.76■□□□□ 0.43
TDP2-201ENST00000341060 ESCO1Q5FWF5 840 aa17.75■□□□□ 0.43
TDP2-201ENST00000341060 UNC5CLQ8IV45 518 aa17.75■□□□□ 0.43
TDP2-201ENST00000341060 ANO2Q9NQ90 1003 aa17.75■□□□□ 0.43
TDP2-201ENST00000341060 ZNF335Q9H4Z2 1342 aaPredicted RBP17.75■□□□□ 0.43
TDP2-201ENST00000341060 BEND3Q5T5X7 828 aa17.75■□□□□ 0.43
TDP2-201ENST00000341060 DNAAF4Q8WXU2 420 aa17.75■□□□□ 0.43
TDP2-201ENST00000341060 IL1RAPL2Q9NP60 686 aa17.75■□□□□ 0.43
TDP2-201ENST00000341060 RGPD5Q99666 1765 aa17.74■□□□□ 0.43
TDP2-201ENST00000341060 PXDNQ92626 1479 aa17.74■□□□□ 0.43
TDP2-201ENST00000341060 TEFQ10587 303 aa17.74■□□□□ 0.43
TDP2-201ENST00000341060 TMX3Q96JJ7 454 aa17.74■□□□□ 0.43
TDP2-201ENST00000341060 C19orf44Q9H6X5 657 aa17.74■□□□□ 0.43
TDP2-201ENST00000341060 LMBRD1Q9NUN5 540 aa17.74■□□□□ 0.43
TDP2-201ENST00000341060 PALD1Q9ULE6 856 aa17.74■□□□□ 0.43
TDP2-201ENST00000341060 ZDHHC9Q9Y397 364 aa17.74■□□□□ 0.43
TDP2-201ENST00000341060 ADAMTS7Q9UKP4 1686 aa17.74■□□□□ 0.43
TDP2-201ENST00000341060 SURF6O75683 361 aaKnown RBP17.74■□□□□ 0.43
TDP2-201ENST00000341060 NBPF7P0C2Y1 421 aaPredicted RBP17.74■□□□□ 0.43
TDP2-201ENST00000341060 ZNF530Q6P9A1 599 aaPredicted RBP17.74■□□□□ 0.43
TDP2-201ENST00000341060 RHPN1Q8TCX5 695 aa17.74■□□□□ 0.43
TDP2-201ENST00000341060 ADCY9O60503 1353 aa17.73■□□□□ 0.43
TDP2-201ENST00000341060 PI4KAP2A4QPH2 592 aa17.73■□□□□ 0.43
TDP2-201ENST00000341060 BTBD11A6QL63 1104 aa17.73■□□□□ 0.43
TDP2-201ENST00000341060 SRGAP3O43295 1099 aa17.73■□□□□ 0.43
TDP2-201ENST00000341060 AMOTQ4VCS5 1084 aa17.73■□□□□ 0.43
TDP2-201ENST00000341060 PLEKHO1Q53GL0 409 aaPredicted RBP17.73■□□□□ 0.43
TDP2-201ENST00000341060 PI4KAP1Q8N8J0 262 aa17.73■□□□□ 0.43
TDP2-201ENST00000341060 LRRC59Q96AG4 307 aaKnown RBP17.73■□□□□ 0.43
TDP2-201ENST00000341060 ANO8Q9HCE9 1232 aaPredicted RBP17.73■□□□□ 0.43
TDP2-201ENST00000341060 KIF1BPQ96EK5 621 aa17.72■□□□□ 0.43
TDP2-201ENST00000341060 ORAI2Q96SN7 254 aa17.72■□□□□ 0.43
TDP2-201ENST00000341060 KCNQ3O43525 872 aa17.72■□□□□ 0.43
TDP2-201ENST00000341060 CUL4AQ13619 759 aa17.72■□□□□ 0.43
TDP2-201ENST00000341060 NUTM1Q86Y26 1132 aa17.72■□□□□ 0.43
TDP2-201ENST00000341060 PI4K2BQ8TCG2 481 aa17.72■□□□□ 0.43
TDP2-201ENST00000341060 ZBTB7CA1YPR0 619 aa17.71■□□□□ 0.42
TDP2-201ENST00000341060 ARHGEF25Q86VW2 580 aa17.71■□□□□ 0.42
TDP2-201ENST00000341060 INTS4Q96HW7 963 aaKnown RBP17.71■□□□□ 0.42
TDP2-201ENST00000341060 DBF4Q9UBU7 674 aaPredicted RBP17.71■□□□□ 0.42
TDP2-201ENST00000341060 GCP02774 474 aa17.7■□□□□ 0.42
TDP2-201ENST00000341060 ZNF445P59923 1031 aa17.7■□□□□ 0.42
TDP2-201ENST00000341060 MPRIPQ6WCQ1 1025 aa17.7■□□□□ 0.42
TDP2-201ENST00000341060 IL25Q9H293 177 aa17.7■□□□□ 0.42
TDP2-201ENST00000341060 HEG1Q9ULI3 1381 aa17.7■□□□□ 0.42
TDP2-201ENST00000341060 KIF1AQ12756 1690 aa17.7■□□□□ 0.42
TDP2-201ENST00000341060 RNMTO43148 476 aaKnown RBP17.69■□□□□ 0.42
TDP2-201ENST00000341060 ATF3P18847 181 aa17.69■□□□□ 0.42
TDP2-201ENST00000341060 HSP90AB4PQ58FF6 505 aa17.69■□□□□ 0.42
TDP2-201ENST00000341060 HSPA4P34932 840 aa17.69■□□□□ 0.42
TDP2-201ENST00000341060 CLCN1P35523 988 aa17.69■□□□□ 0.42
TDP2-201ENST00000341060 MTX1Q13505 466 aa17.69■□□□□ 0.42
TDP2-201ENST00000341060 C1orf141Q5JVX7 400 aa17.69■□□□□ 0.42
TDP2-201ENST00000341060 SCN11AQ9UI33 1791 aa17.68■□□□□ 0.42
TDP2-201ENST00000341060 CAVIN1Q6NZI2 390 aaKnown RBP17.68■□□□□ 0.42
TDP2-201ENST00000341060 TCHHQ07283 1943 aa17.68■□□□□ 0.42
TDP2-201ENST00000341060 USP42Q9H9J4 1324 aaKnown RBP17.68■□□□□ 0.42
TDP2-201ENST00000341060 ANXA1P04083 346 aa17.68■□□□□ 0.42
TDP2-201ENST00000341060 RAD50Q92878 1312 aa17.67■□□□□ 0.42
TDP2-201ENST00000341060 SGSM2O43147 1006 aa17.67■□□□□ 0.42
TDP2-201ENST00000341060 NASPP49321 788 aaPredicted RBP17.67■□□□□ 0.42
TDP2-201ENST00000341060 ZSCAN23Q3MJ62 389 aa17.67■□□□□ 0.42
TDP2-201ENST00000341060 CNTROBQ8N137 903 aa17.67■□□□□ 0.42
TDP2-201ENST00000341060 TTC41PQ6P2S7 1318 aa17.67■□□□□ 0.42
TDP2-201ENST00000341060 PRPF40AO75400 957 aaKnown RBP17.66■□□□□ 0.42
TDP2-201ENST00000341060 GIGYF1O75420 1035 aaPredicted RBP17.66■□□□□ 0.42
TDP2-201ENST00000341060 BRD1O95696 1058 aa17.66■□□□□ 0.42
TDP2-201ENST00000341060 XPCQ01831 940 aaPredicted RBP17.66■□□□□ 0.42
TDP2-201ENST00000341060 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.66■□□□□ 0.42
TDP2-201ENST00000341060 ALS2Q96Q42 1657 aa17.66■□□□□ 0.42
TDP2-201ENST00000341060 ALDH1L1O75891 902 aa17.66■□□□□ 0.42
TDP2-201ENST00000341060 GPT2Q8TD30 523 aa17.66■□□□□ 0.42
TDP2-201ENST00000341060 ANKRD24Q8TF21 1146 aa17.66■□□□□ 0.42
TDP2-201ENST00000341060 C5P01031 1676 aa17.65■□□□□ 0.42
TDP2-201ENST00000341060 CCDC173Q0VFZ6 552 aa17.65■□□□□ 0.42
TDP2-201ENST00000341060 TRIM44Q96DX7 344 aaPredicted RBP17.65■□□□□ 0.42
TDP2-201ENST00000341060 UPF3BQ9BZI7 483 aaKnown RBP17.65■□□□□ 0.42
TDP2-201ENST00000341060 MAP4K4O95819 1239 aaPredicted RBP17.65■□□□□ 0.42
TDP2-201ENST00000341060 NCLP19338 710 aaKnown RBP17.65■□□□□ 0.42
TDP2-201ENST00000341060 MAP3K2Q9Y2U5 619 aa17.65■□□□□ 0.42
TDP2-201ENST00000341060 C1orf167Q5SNV9 1468 aa17.64■□□□□ 0.42
TDP2-201ENST00000341060 ESPNB1AK53 854 aa17.64■□□□□ 0.41
TDP2-201ENST00000341060 KSR2Q6VAB6 950 aa17.64■□□□□ 0.41
TDP2-201ENST00000341060 MST1RQ04912 1400 aa17.64■□□□□ 0.41
TDP2-201ENST00000341060 CADPS2Q86UW7 1296 aa17.63■□□□□ 0.41
TDP2-201ENST00000341060 PPP1R9BQ96SB3 815 aa17.63■□□□□ 0.41
TDP2-201ENST00000341060 GLRX3O76003 335 aaKnown RBP17.63■□□□□ 0.41
TDP2-201ENST00000341060 PROSER3Q2NL68 480 aa17.63■□□□□ 0.41
TDP2-201ENST00000341060 LSG1Q9H089 658 aaKnown RBP17.63■□□□□ 0.41
TDP2-201ENST00000341060 HDAC5Q9UQL6 1122 aa17.63■□□□□ 0.41
TDP2-201ENST00000341060 NOL8Q76FK4 1167 aaKnown RBP17.62■□□□□ 0.41
TDP2-201ENST00000341060 C9orf78Q9NZ63 289 aaPredicted RBP17.62■□□□□ 0.41
TDP2-201ENST00000341060 ERBB4Q15303 1308 aa17.62■□□□□ 0.41
TDP2-201ENST00000341060 XIRP1Q702N8 1843 aaKnown RBP17.62■□□□□ 0.41
TDP2-201ENST00000341060 OS9Q13438 667 aaPredicted RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms