RNA–Protein interactions for RNA: ENST00000340729.9

CLPB-202, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 2 BASIC

Gene CLPB, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-202ENST00000340729 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP25■■□□□ 1.59
CLPB-202ENST00000340729 PNMA6EA0A0J9YXQ4 647 aa24.99■■□□□ 1.59
CLPB-202ENST00000340729 TRIM6-TRIM34B2RNG4 842 aa24.99■■□□□ 1.59
CLPB-202ENST00000340729 PTMAP06454 111 aaKnown RBP24.99■■□□□ 1.59
CLPB-202ENST00000340729 MTHFSDQ2M296 383 aaKnown RBP24.99■■□□□ 1.59
CLPB-202ENST00000340729 RILPL2Q969X0 211 aa24.99■■□□□ 1.59
CLPB-202ENST00000340729 MAP3K19Q56UN5 1328 aa24.99■■□□□ 1.59
CLPB-202ENST00000340729 FLIIQ13045 1269 aa24.98■■□□□ 1.59
CLPB-202ENST00000340729 TBX22Q9Y458 520 aa24.98■■□□□ 1.59
CLPB-202ENST00000340729 CCDC183Q5T5S1 534 aa24.98■■□□□ 1.59
CLPB-202ENST00000340729 CCDC30Q5VVM6 783 aa24.98■■□□□ 1.59
CLPB-202ENST00000340729 ZNF142P52746 1687 aaPredicted RBP24.97■■□□□ 1.59
CLPB-202ENST00000340729 MIS18AQ9NYP9 233 aa24.97■■□□□ 1.59
CLPB-202ENST00000340729 ACEP12821 1306 aa24.97■■□□□ 1.59
CLPB-202ENST00000340729 GADD45BO75293 160 aaPredicted RBP24.97■■□□□ 1.59
CLPB-202ENST00000340729 ADAMTSL3P82987 1691 aa24.96■■□□□ 1.59
CLPB-202ENST00000340729 PIBF1Q8WXW3 757 aa24.95■■□□□ 1.59
CLPB-202ENST00000340729 PRIMPOLQ96LW4 560 aa24.95■■□□□ 1.59
CLPB-202ENST00000340729 UPF3BQ9BZI7 483 aaKnown RBP24.95■■□□□ 1.59
CLPB-202ENST00000340729 RAD50Q92878 1312 aa24.95■■□□□ 1.58
CLPB-202ENST00000340729 SBNO1A3KN83 1393 aa24.94■■□□□ 1.58
CLPB-202ENST00000340729 FLT4P35916 1363 aa24.94■■□□□ 1.58
CLPB-202ENST00000340729 RAB11FIP3O75154 756 aa24.94■■□□□ 1.58
CLPB-202ENST00000340729 UNC5CLQ8IV45 518 aa24.94■■□□□ 1.58
CLPB-202ENST00000340729 MYRIPQ8NFW9 859 aa24.94■■□□□ 1.58
CLPB-202ENST00000340729 SSH3Q8TE77 659 aa24.93■■□□□ 1.58
CLPB-202ENST00000340729 BABAM1Q9NWV8 329 aa24.93■■□□□ 1.58
CLPB-202ENST00000340729 IGSF1Q8N6C5 1336 aa24.93■■□□□ 1.58
CLPB-202ENST00000340729 FOXO3O43524 673 aa24.93■■□□□ 1.58
CLPB-202ENST00000340729 FKBP5Q13451 457 aaPredicted RBP24.93■■□□□ 1.58
CLPB-202ENST00000340729 TTC14Q96N46 770 aa24.93■■□□□ 1.58
CLPB-202ENST00000340729 TCHHQ07283 1943 aa24.93■■□□□ 1.58
CLPB-202ENST00000340729 UBE2HP62256 183 aa24.92■■□□□ 1.58
CLPB-202ENST00000340729 NOL8Q76FK4 1167 aaKnown RBP24.92■■□□□ 1.58
CLPB-202ENST00000340729 TTC21AQ8NDW8 1320 aa24.92■■□□□ 1.58
CLPB-202ENST00000340729 CRYBG1Q9Y4K1 1723 aa24.92■■□□□ 1.58
CLPB-202ENST00000340729 ZSCAN22P10073 491 aaPredicted RBP24.92■■□□□ 1.58
CLPB-202ENST00000340729 HMGN5P82970 282 aaKnown RBP24.92■■□□□ 1.58
CLPB-202ENST00000340729 LRRFIP2Q9Y608 721 aaKnown RBP24.92■■□□□ 1.58
CLPB-202ENST00000340729 GTF2F1P35269 517 aaKnown RBP eCLIP24.91■■□□□ 1.58
CLPB-202ENST00000340729 GDPD2Q9HCC8 539 aa24.91■■□□□ 1.58
CLPB-202ENST00000340729 SGSM2O43147 1006 aa24.9■■□□□ 1.58
CLPB-202ENST00000340729 IL25Q9H293 177 aa24.9■■□□□ 1.58
CLPB-202ENST00000340729 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.9■■□□□ 1.58
CLPB-202ENST00000340729 ATP6V1DQ9Y5K8 247 aa24.9■■□□□ 1.58
CLPB-202ENST00000340729 USP44Q9H0E7 712 aa24.89■■□□□ 1.58
CLPB-202ENST00000340729 POLA2Q14181 598 aa24.89■■□□□ 1.57
CLPB-202ENST00000340729 SPTLC3Q9NUV7 552 aa24.89■■□□□ 1.57
CLPB-202ENST00000340729 PI4K2BQ8TCG2 481 aa24.88■■□□□ 1.57
CLPB-202ENST00000340729 SNX14Q9Y5W7 946 aa24.88■■□□□ 1.57
CLPB-202ENST00000340729 CHD2O14647 1828 aaKnown RBP24.88■■□□□ 1.57
CLPB-202ENST00000340729 UBTFL1P0CB47 393 aaPredicted RBP24.87■■□□□ 1.57
CLPB-202ENST00000340729 NOLC1Q14978 699 aaKnown RBP eCLIP24.87■■□□□ 1.57
CLPB-202ENST00000340729 SMAP1Q8IYB5 467 aaPredicted RBP24.87■■□□□ 1.57
CLPB-202ENST00000340729 LIMCH1Q9UPQ0 1083 aa24.87■■□□□ 1.57
CLPB-202ENST00000340729 STX6O43752 255 aa24.87■■□□□ 1.57
CLPB-202ENST00000340729 LSG1Q9H089 658 aaKnown RBP24.87■■□□□ 1.57
CLPB-202ENST00000340729 USP25Q9UHP3 1055 aa24.87■■□□□ 1.57
CLPB-202ENST00000340729 ADCY5O95622 1261 aa24.86■■□□□ 1.57
CLPB-202ENST00000340729 CNPY2Q9Y2B0 182 aa24.86■■□□□ 1.57
CLPB-202ENST00000340729 F13A1P00488 732 aa24.85■■□□□ 1.57
CLPB-202ENST00000340729 FUCA2Q9BTY2 467 aa24.85■■□□□ 1.57
CLPB-202ENST00000340729 MAP3K5Q99683 1374 aa24.85■■□□□ 1.57
CLPB-202ENST00000340729 KCNA6P17658 529 aa24.85■■□□□ 1.57
CLPB-202ENST00000340729 EYA1Q99502 592 aa24.85■■□□□ 1.57
CLPB-202ENST00000340729 USP42Q9H9J4 1324 aaKnown RBP24.85■■□□□ 1.57
CLPB-202ENST00000340729 KDM4AO75164 1064 aa24.84■■□□□ 1.57
CLPB-202ENST00000340729 SYT1P21579 422 aa24.84■■□□□ 1.57
CLPB-202ENST00000340729 GNAT3A8MTJ3 354 aa24.84■■□□□ 1.57
CLPB-202ENST00000340729 AK2P54819 239 aa24.84■■□□□ 1.57
CLPB-202ENST00000340729 CNTROBQ8N137 903 aa24.84■■□□□ 1.57
CLPB-202ENST00000340729 RUFY3Q7L099 469 aa24.83■■□□□ 1.57
CLPB-202ENST00000340729 RHPN1Q8TCX5 695 aa24.83■■□□□ 1.57
CLPB-202ENST00000340729 KIF1BPQ96EK5 621 aa24.83■■□□□ 1.57
CLPB-202ENST00000340729 PIK3C2AO00443 1686 aa24.83■■□□□ 1.56
CLPB-202ENST00000340729 TPM3P06753 285 aa24.82■■□□□ 1.56
CLPB-202ENST00000340729 FOXD4L6Q3SYB3 417 aaPredicted RBP24.82■■□□□ 1.56
CLPB-202ENST00000340729 FOXD4L3Q6VB84 417 aaPredicted RBP24.82■■□□□ 1.56
CLPB-202ENST00000340729 CCDC94Q9BW85 323 aaPredicted RBP24.82■■□□□ 1.56
CLPB-202ENST00000340729 IL1RAPL2Q9NP60 686 aa24.82■■□□□ 1.56
CLPB-202ENST00000340729 HCLS1P14317 486 aaPredicted RBP24.82■■□□□ 1.56
CLPB-202ENST00000340729 DNTTIP2Q5QJE6 756 aaKnown RBP24.82■■□□□ 1.56
CLPB-202ENST00000340729 SMC3Q9UQE7 1217 aa24.82■■□□□ 1.56
CLPB-202ENST00000340729 NUTM1Q86Y26 1132 aa24.81■■□□□ 1.56
CLPB-202ENST00000340729 PRDM4Q9UKN5 801 aa24.81■■□□□ 1.56
CLPB-202ENST00000340729 SETD1BQ9UPS6 1966 aaKnown RBP24.81■■□□□ 1.56
CLPB-202ENST00000340729 PPP1R42Q7Z4L9 355 aa24.8■■□□□ 1.56
CLPB-202ENST00000340729 SURF6O75683 361 aaKnown RBP24.79■■□□□ 1.56
CLPB-202ENST00000340729 PDIA4P13667 645 aaKnown RBP24.79■■□□□ 1.56
CLPB-202ENST00000340729 ZSCAN31Q96LW9 406 aaPredicted RBP24.79■■□□□ 1.56
CLPB-202ENST00000340729 MARF1Q9Y4F3 1742 aaKnown RBP24.79■■□□□ 1.56
CLPB-202ENST00000340729 HSP90AB4PQ58FF6 505 aa24.79■■□□□ 1.56
CLPB-202ENST00000340729 RASEFQ8IZ41 740 aa24.79■■□□□ 1.56
CLPB-202ENST00000340729 KCNB2Q92953 911 aa24.79■■□□□ 1.56
CLPB-202ENST00000340729 TM6SF1Q9BZW5 370 aa24.79■■□□□ 1.56
CLPB-202ENST00000340729 SH2B1Q9NRF2 756 aaPredicted RBP24.79■■□□□ 1.56
CLPB-202ENST00000340729 NWD1Q149M9 1564 aa24.79■■□□□ 1.56
CLPB-202ENST00000340729 TTC41PQ6P2S7 1318 aa24.79■■□□□ 1.56
CLPB-202ENST00000340729 TAF7Q15545 349 aaPredicted RBP24.78■■□□□ 1.56
CLPB-202ENST00000340729 VPS53Q5VIR6 699 aa24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms