RNA–Protein interactions for RNA: ENST00000340398.4

H3F3C-201, Transcript of H3 histone family member 3C, humanhuman

APPRIS P1 BASIC

Gene H3F3C, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3C-201ENST00000340398 CANXP27824 592 aaKnown RBP22.08■■□□□ 1.13
H3F3C-201ENST00000340398 NFIXQ14938 502 aa22.08■■□□□ 1.13
H3F3C-201ENST00000340398 BCL2L12Q9HB09 334 aa22.08■■□□□ 1.13
H3F3C-201ENST00000340398 NMRK2Q9NPI5 230 aa22.08■■□□□ 1.13
H3F3C-201ENST00000340398 NARFQ9UHQ1 456 aa22.08■■□□□ 1.13
H3F3C-201ENST00000340398 IL17REQ8NFR9 667 aa22.07■■□□□ 1.12
H3F3C-201ENST00000340398 MRC1P22897 1456 aa22.07■■□□□ 1.12
H3F3C-201ENST00000340398 ARFGEF1Q9Y6D6 1849 aa22.06■■□□□ 1.12
H3F3C-201ENST00000340398 VSIG10Q8N0Z9 540 aa22.05■■□□□ 1.12
H3F3C-201ENST00000340398 COL15A1P39059 1388 aa22.04■■□□□ 1.12
H3F3C-201ENST00000340398 TOMM70O94826 608 aa22.03■■□□□ 1.12
H3F3C-201ENST00000340398 SERPINB2P05120 415 aa22.03■■□□□ 1.12
H3F3C-201ENST00000340398 TTC5Q8N0Z6 440 aa22.03■■□□□ 1.12
H3F3C-201ENST00000340398 ZNF496Q96IT1 587 aaPredicted RBP22.03■■□□□ 1.12
H3F3C-201ENST00000340398 AFDNP55196 1824 aaKnown RBP22.03■■□□□ 1.12
H3F3C-201ENST00000340398 COL3A1P02461 1466 aaPredicted RBP22.03■■□□□ 1.12
H3F3C-201ENST00000340398 GNAT3A8MTJ3 354 aa22.02■■□□□ 1.12
H3F3C-201ENST00000340398 BICDL1Q6ZP65 573 aa22.02■■□□□ 1.12
H3F3C-201ENST00000340398 RNF181Q9P0P0 153 aa22.02■■□□□ 1.12
H3F3C-201ENST00000340398 STARD3NLO95772 234 aa22.01■■□□□ 1.11
H3F3C-201ENST00000340398 EIF5P55010 431 aaKnown RBP22.01■■□□□ 1.11
H3F3C-201ENST00000340398 TEFQ10587 303 aa22.01■■□□□ 1.11
H3F3C-201ENST00000340398 PHACTR3Q96KR7 559 aa22.01■■□□□ 1.11
H3F3C-201ENST00000340398 NPC1L1Q9UHC9 1359 aa22■■□□□ 1.11
H3F3C-201ENST00000340398 ZNF790Q6PG37 636 aa22■■□□□ 1.11
H3F3C-201ENST00000340398 SBF1O95248 1867 aa21.99■■□□□ 1.11
H3F3C-201ENST00000340398 KCNQ3O43525 872 aa21.99■■□□□ 1.11
H3F3C-201ENST00000340398 GAS2L2Q8NHY3 880 aa21.99■■□□□ 1.11
H3F3C-201ENST00000340398 UBR2Q8IWV8 1755 aa21.99■■□□□ 1.11
H3F3C-201ENST00000340398 RASSF7Q02833 373 aa21.98■■□□□ 1.11
H3F3C-201ENST00000340398 RRAGCQ9HB90 399 aa21.98■■□□□ 1.11
H3F3C-201ENST00000340398 TBC1D2BQ9UPU7 963 aa21.98■■□□□ 1.11
H3F3C-201ENST00000340398 ZNF330Q9Y3S2 320 aaPredicted RBP21.98■■□□□ 1.11
H3F3C-201ENST00000340398 A1BGP04217 495 aa21.97■■□□□ 1.11
H3F3C-201ENST00000340398 PRELPP51888 382 aa21.97■■□□□ 1.11
H3F3C-201ENST00000340398 TBC1D9BQ66K14 1250 aa21.97■■□□□ 1.11
H3F3C-201ENST00000340398 C2CD5Q86YS7 1000 aa21.97■■□□□ 1.11
H3F3C-201ENST00000340398 CCDC24Q8N4L8 307 aa21.97■■□□□ 1.11
H3F3C-201ENST00000340398 HEG1Q9ULI3 1381 aa21.97■■□□□ 1.11
H3F3C-201ENST00000340398 PRKAR2BP31323 418 aa21.96■■□□□ 1.11
H3F3C-201ENST00000340398 NRXN2Q9P2S2 1712 aa21.96■■□□□ 1.11
H3F3C-201ENST00000340398 CARMIL3Q8ND23 1372 aa21.96■■□□□ 1.11
H3F3C-201ENST00000340398 A0A087WZG4 1122 aa21.95■■□□□ 1.1
H3F3C-201ENST00000340398 APLP1P51693 650 aa21.95■■□□□ 1.1
H3F3C-201ENST00000340398 DNAJC5GQ8N7S2 189 aa21.95■■□□□ 1.1
H3F3C-201ENST00000340398 TTLL6Q8N841 843 aa21.95■■□□□ 1.1
H3F3C-201ENST00000340398 H0YIN7 160 aa21.94■■□□□ 1.1
H3F3C-201ENST00000340398 IFFO2Q5TF58 517 aa21.94■■□□□ 1.1
H3F3C-201ENST00000340398 C16orf71Q8IYS4 520 aaPredicted RBP21.94■■□□□ 1.1
H3F3C-201ENST00000340398 TEX13AQ9BXU3 409 aaPredicted RBP21.94■■□□□ 1.1
H3F3C-201ENST00000340398 RSPH6AQ9H0K4 717 aa21.94■■□□□ 1.1
H3F3C-201ENST00000340398 BTBD11A6QL63 1104 aa21.93■■□□□ 1.1
H3F3C-201ENST00000340398 SIPA1L3O60292 1781 aaPredicted RBP21.93■■□□□ 1.1
H3F3C-201ENST00000340398 KDM2BQ8NHM5 1336 aa21.93■■□□□ 1.1
H3F3C-201ENST00000340398 RBM46Q8TBY0 533 aaKnown RBP21.93■■□□□ 1.1
H3F3C-201ENST00000340398 FMNL2Q96PY5 1086 aa21.93■■□□□ 1.1
H3F3C-201ENST00000340398 PIP4K2AP48426 406 aaPredicted RBP21.92■■□□□ 1.1
H3F3C-201ENST00000340398 HTRA3P83110 453 aa21.92■■□□□ 1.1
H3F3C-201ENST00000340398 USP16Q9Y5T5 823 aa21.92■■□□□ 1.1
H3F3C-201ENST00000340398 CEMIPQ8WUJ3 1361 aa21.91■■□□□ 1.1
H3F3C-201ENST00000340398 ZNF622Q969S3 477 aaKnown RBP eCLIP21.91■■□□□ 1.1
H3F3C-201ENST00000340398 CFAP53Q96M91 514 aa21.91■■□□□ 1.1
H3F3C-201ENST00000340398 CCDC88AQ3V6T2 1871 aa21.9■■□□□ 1.1
H3F3C-201ENST00000340398 PRAMEF22A3QJZ6 481 aa21.9■■□□□ 1.1
H3F3C-201ENST00000340398 IL6STP40189 918 aaPredicted RBP21.9■■□□□ 1.1
H3F3C-201ENST00000340398 ZNF219Q9P2Y4 722 aaPredicted RBP21.9■■□□□ 1.1
H3F3C-201ENST00000340398 U2AF1L5P0DN76 240 aaPredicted RBP21.89■■□□□ 1.09
H3F3C-201ENST00000340398 LMNB1P20700 586 aa21.89■■□□□ 1.09
H3F3C-201ENST00000340398 PPP2R1AP30153 589 aa21.89■■□□□ 1.09
H3F3C-201ENST00000340398 U2AF1Q01081 240 aaKnown RBP eCLIP21.89■■□□□ 1.09
H3F3C-201ENST00000340398 PRR5LQ6MZQ0 368 aa21.89■■□□□ 1.09
H3F3C-201ENST00000340398 MCM10Q7L590 875 aa21.89■■□□□ 1.09
H3F3C-201ENST00000340398 NFKBIEO00221 500 aa21.88■■□□□ 1.09
H3F3C-201ENST00000340398 CAMTA2O94983 1202 aa21.88■■□□□ 1.09
H3F3C-201ENST00000340398 DCTN1Q14203 1278 aa21.88■■□□□ 1.09
H3F3C-201ENST00000340398 NUDCQ9Y266 331 aa21.88■■□□□ 1.09
H3F3C-201ENST00000340398 DLEC1Q9Y238 1755 aa21.88■■□□□ 1.09
H3F3C-201ENST00000340398 ANKRD31Q8N7Z5 1873 aa21.88■■□□□ 1.09
H3F3C-201ENST00000340398 SETDB2Q96T68 719 aa21.87■■□□□ 1.09
H3F3C-201ENST00000340398 BRIP1Q9BX63 1249 aa21.87■■□□□ 1.09
H3F3C-201ENST00000340398 PDE6BP35913 854 aa21.86■■□□□ 1.09
H3F3C-201ENST00000340398 FSTL1Q12841 308 aa21.86■■□□□ 1.09
H3F3C-201ENST00000340398 C21orf2O43822 256 aa21.85■■□□□ 1.09
H3F3C-201ENST00000340398 NPM2Q86SE8 214 aaKnown RBP21.85■■□□□ 1.09
H3F3C-201ENST00000340398 DZIP3Q86Y13 1208 aaKnown RBP21.85■■□□□ 1.09
H3F3C-201ENST00000340398 RTF1Q92541 710 aaKnown RBP21.85■■□□□ 1.09
H3F3C-201ENST00000340398 GLTPD2A6NH11 291 aa21.84■■□□□ 1.09
H3F3C-201ENST00000340398 MIS18AQ9NYP9 233 aa21.82■■□□□ 1.08
H3F3C-201ENST00000340398 SCN7AQ01118 1682 aa21.82■■□□□ 1.08
H3F3C-201ENST00000340398 NPHP1O15259 732 aa21.81■■□□□ 1.08
H3F3C-201ENST00000340398 SNRPA1P09661 255 aaKnown RBP21.81■■□□□ 1.08
H3F3C-201ENST00000340398 VEGFAP15692 232 aaPredicted RBP21.81■■□□□ 1.08
H3F3C-201ENST00000340398 CNBD1Q8NA66 436 aa21.81■■□□□ 1.08
H3F3C-201ENST00000340398 ZC3H4Q9UPT8 1303 aaKnown RBP21.8■■□□□ 1.08
H3F3C-201ENST00000340398 WDR90Q96KV7 1748 aa21.8■■□□□ 1.08
H3F3C-201ENST00000340398 TNRC6CQ9HCJ0 1690 aaKnown RBP21.8■■□□□ 1.08
H3F3C-201ENST00000340398 POTECB2RU33 542 aa21.8■■□□□ 1.08
H3F3C-201ENST00000340398 NBPF26B4DH59 902 aa21.8■■□□□ 1.08
H3F3C-201ENST00000340398 NBPF10Q6P3W6 841 aaKnown RBP21.8■■□□□ 1.08
H3F3C-201ENST00000340398 NBPF15Q8N660 670 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 135.4 ms