RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 PIK3R4Q99570 1358 aa17.49■□□□□ 0.39
RET-201ENST00000340058 LRRC2Q9BYS8 371 aa17.49■□□□□ 0.39
RET-201ENST00000340058 LRP2BPQ9P2M1 347 aa17.49■□□□□ 0.39
RET-201ENST00000340058 TTC37Q6PGP7 1564 aa17.49■□□□□ 0.39
RET-201ENST00000340058 STK38Q15208 465 aa17.48■□□□□ 0.39
RET-201ENST00000340058 KLHDC4Q8TBB5 520 aa17.48■□□□□ 0.39
RET-201ENST00000340058 TRIM5Q9C035 493 aa17.48■□□□□ 0.39
RET-201ENST00000340058 EIF2AK4Q9P2K8 1649 aaKnown RBP17.48■□□□□ 0.39
RET-201ENST00000340058 RAI14Q9P0K7 980 aa17.48■□□□□ 0.39
RET-201ENST00000340058 RNF123Q5XPI4 1314 aa17.47■□□□□ 0.39
RET-201ENST00000340058 SNRPA1P09661 255 aaKnown RBP17.47■□□□□ 0.39
RET-201ENST00000340058 TFIP11Q9UBB9 837 aaKnown RBP17.47■□□□□ 0.39
RET-201ENST00000340058 IFIT5Q13325 482 aaKnown RBP17.47■□□□□ 0.39
RET-201ENST00000340058 CAMK4Q16566 473 aa17.47■□□□□ 0.39
RET-201ENST00000340058 LMBR1LQ6UX01 489 aa17.47■□□□□ 0.39
RET-201ENST00000340058 CCT2P78371 535 aaKnown RBP17.47■□□□□ 0.39
RET-201ENST00000340058 NBPF6Q5VWK0 638 aa17.47■□□□□ 0.39
RET-201ENST00000340058 NECAB1Q8N987 351 aa17.47■□□□□ 0.39
RET-201ENST00000340058 NBPF4Q96M43 638 aa17.47■□□□□ 0.39
RET-201ENST00000340058 R3HCC1Q9Y3T6 440 aaKnown RBP17.47■□□□□ 0.39
RET-201ENST00000340058 METP08581 1390 aa17.47■□□□□ 0.39
RET-201ENST00000340058 EXOC5O00471 708 aa17.46■□□□□ 0.39
RET-201ENST00000340058 KINO60870 393 aaKnown RBP17.46■□□□□ 0.39
RET-201ENST00000340058 CIZ1Q9ULV3 898 aaPredicted RBP17.46■□□□□ 0.39
RET-201ENST00000340058 IQSEC3Q9UPP2 1182 aaPredicted RBP17.46■□□□□ 0.39
RET-201ENST00000340058 TDO2P48775 406 aa17.46■□□□□ 0.39
RET-201ENST00000340058 NCBP3Q53F19 620 aaKnown RBP17.46■□□□□ 0.39
RET-201ENST00000340058 NGLY1Q96IV0 654 aa17.46■□□□□ 0.39
RET-201ENST00000340058 TSPY26PQ9H489 355 aa17.46■□□□□ 0.39
RET-201ENST00000340058 DCTPP1Q9H773 170 aa17.46■□□□□ 0.39
RET-201ENST00000340058 PLEKHM2Q8IWE5 1019 aa17.46■□□□□ 0.39
RET-201ENST00000340058 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.46■□□□□ 0.39
RET-201ENST00000340058 C19orf44Q9H6X5 657 aa17.46■□□□□ 0.39
RET-201ENST00000340058 GCC2Q8IWJ2 1684 aa17.46■□□□□ 0.38
RET-201ENST00000340058 NPC1L1Q9UHC9 1359 aa17.45■□□□□ 0.38
RET-201ENST00000340058 ATP2B2Q01814 1243 aa17.45■□□□□ 0.38
RET-201ENST00000340058 LDHAL6AQ6ZMR3 332 aa17.45■□□□□ 0.38
RET-201ENST00000340058 KCNQ3O43525 872 aa17.45■□□□□ 0.38
RET-201ENST00000340058 KRT85P78386 507 aa17.45■□□□□ 0.38
RET-201ENST00000340058 AKAP4Q5JQC9 854 aa17.45■□□□□ 0.38
RET-201ENST00000340058 GRM8O00222 908 aa17.45■□□□□ 0.38
RET-201ENST00000340058 ATP8B2P98198 1209 aa17.45■□□□□ 0.38
RET-201ENST00000340058 TRIM34Q9BYJ4 488 aa17.45■□□□□ 0.38
RET-201ENST00000340058 RBM27Q9P2N5 1060 aaKnown RBP17.45■□□□□ 0.38
RET-201ENST00000340058 ZCRB1Q8TBF4 217 aaKnown RBP17.44■□□□□ 0.38
RET-201ENST00000340058 MINDY4BA8MYZ0 360 aa17.44■□□□□ 0.38
RET-201ENST00000340058 SART3Q15020 963 aaKnown RBP17.44■□□□□ 0.38
RET-201ENST00000340058 PPP1R1BQ9UD71 204 aaPredicted RBP17.44■□□□□ 0.38
RET-201ENST00000340058 CHL1O00533 1208 aa17.44■□□□□ 0.38
RET-201ENST00000340058 KDM2BQ8NHM5 1336 aa17.44■□□□□ 0.38
RET-201ENST00000340058 CPA1P15085 419 aa17.43■□□□□ 0.38
RET-201ENST00000340058 SLC4A8Q2Y0W8 1093 aa17.43■□□□□ 0.38
RET-201ENST00000340058 IP6K1Q92551 441 aa17.43■□□□□ 0.38
RET-201ENST00000340058 KSR2Q6VAB6 950 aa17.43■□□□□ 0.38
RET-201ENST00000340058 AIDAQ96BJ3 306 aa17.42■□□□□ 0.38
RET-201ENST00000340058 SPATA32Q96LK8 384 aa17.42■□□□□ 0.38
RET-201ENST00000340058 NPHP3Q7Z494 1330 aa17.42■□□□□ 0.38
RET-201ENST00000340058 PNMA6EA0A0J9YXQ4 647 aa17.42■□□□□ 0.38
RET-201ENST00000340058 MSH6P52701 1360 aa17.41■□□□□ 0.38
RET-201ENST00000340058 HSP90AB3PQ58FF7 597 aa17.41■□□□□ 0.38
RET-201ENST00000340058 HOMER1Q86YM7 354 aa17.41■□□□□ 0.38
RET-201ENST00000340058 TMX3Q96JJ7 454 aa17.41■□□□□ 0.38
RET-201ENST00000340058 CWC25Q9NXE8 425 aaPredicted RBP17.41■□□□□ 0.38
RET-201ENST00000340058 NBPF7P0C2Y1 421 aaPredicted RBP17.41■□□□□ 0.38
RET-201ENST00000340058 ANKRD1Q15327 319 aa17.41■□□□□ 0.38
RET-201ENST00000340058 ZGPATQ8N5A5 531 aaKnown RBP17.41■□□□□ 0.38
RET-201ENST00000340058 HELBQ8NG08 1087 aaPredicted RBP17.41■□□□□ 0.38
RET-201ENST00000340058 PCMTD1Q96MG8 357 aaPredicted RBP17.41■□□□□ 0.38
RET-201ENST00000340058 TNMDQ9H2S6 317 aa17.41■□□□□ 0.38
RET-201ENST00000340058 ERVK-7P63135 1459 aa17.41■□□□□ 0.38
RET-201ENST00000340058 IGHMBP2P38935 993 aaKnown RBP17.4■□□□□ 0.38
RET-201ENST00000340058 NDUFB9Q9Y6M9 179 aa17.4■□□□□ 0.38
RET-201ENST00000340058 CCDC144CPQ8IYA2 1237 aa17.4■□□□□ 0.38
RET-201ENST00000340058 LIMCH1Q9UPQ0 1083 aa17.4■□□□□ 0.38
RET-201ENST00000340058 BAG4O95429 457 aaKnown RBP17.4■□□□□ 0.38
RET-201ENST00000340058 HSP90AA2PQ14568 343 aaPredicted RBP17.4■□□□□ 0.38
RET-201ENST00000340058 ESYT1Q9BSJ8 1104 aa17.4■□□□□ 0.38
RET-201ENST00000340058 IKQ13123 557 aaPredicted RBP17.4■□□□□ 0.38
RET-201ENST00000340058 TMEM2Q9UHN6 1383 aa17.39■□□□□ 0.38
RET-201ENST00000340058 NACAP1Q9BZK3 213 aa17.39■□□□□ 0.37
RET-201ENST00000340058 GNL3LQ9NVN8 582 aaKnown RBP17.39■□□□□ 0.37
RET-201ENST00000340058 RNMTO43148 476 aaKnown RBP17.39■□□□□ 0.37
RET-201ENST00000340058 MAP3K5Q99683 1374 aa17.39■□□□□ 0.37
RET-201ENST00000340058 PDILTQ8N807 584 aa17.39■□□□□ 0.37
RET-201ENST00000340058 BLMP54132 1417 aaPredicted RBP17.38■□□□□ 0.37
RET-201ENST00000340058 IL17REQ8NFR9 667 aa17.38■□□□□ 0.37
RET-201ENST00000340058 USP19O94966 1318 aa17.38■□□□□ 0.37
RET-201ENST00000340058 BRPF1P55201 1214 aaPredicted RBP17.38■□□□□ 0.37
RET-201ENST00000340058 LINS1Q8NG48 757 aa17.38■□□□□ 0.37
RET-201ENST00000340058 EVI5LQ96CN4 794 aa17.38■□□□□ 0.37
RET-201ENST00000340058 ARHGEF5Q12774 1597 aa17.38■□□□□ 0.37
RET-201ENST00000340058 EDC4Q6P2E9 1401 aaKnown RBP17.38■□□□□ 0.37
RET-201ENST00000340058 SMC2O95347 1197 aa17.38■□□□□ 0.37
RET-201ENST00000340058 CKAP2LQ8IYA6 745 aa17.38■□□□□ 0.37
RET-201ENST00000340058 IMMTQ16891 758 aaKnown RBP17.37■□□□□ 0.37
RET-201ENST00000340058 ZMYM4Q5VZL5 1548 aa17.37■□□□□ 0.37
RET-201ENST00000340058 CCDC69A6NI79 296 aa17.37■□□□□ 0.37
RET-201ENST00000340058 ZSCAN31Q96LW9 406 aaPredicted RBP17.37■□□□□ 0.37
RET-201ENST00000340058 PANK2Q9BZ23 570 aa17.37■□□□□ 0.37
RET-201ENST00000340058 PRR36Q9H6K5 1346 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms