RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 DALRD3Q5D0E6 543 aaKnown RBP21.19■□□□□ 0.98
LINC01116-202ENST00000339037 POLRMTO00411 1230 aaKnown RBP21.18■□□□□ 0.98
LINC01116-202ENST00000339037 RNMTO43148 476 aaKnown RBP21.18■□□□□ 0.98
LINC01116-202ENST00000339037 TOMM70O94826 608 aa21.18■□□□□ 0.98
LINC01116-202ENST00000339037 C9orf131Q5VYM1 1079 aa21.18■□□□□ 0.98
LINC01116-202ENST00000339037 SOS1Q07889 1333 aaPredicted RBP21.18■□□□□ 0.98
LINC01116-202ENST00000339037 SLC39A6Q13433 755 aa21.17■□□□□ 0.98
LINC01116-202ENST00000339037 USPL1Q5W0Q7 1092 aa21.17■□□□□ 0.98
LINC01116-202ENST00000339037 ARFGEF1Q9Y6D6 1849 aa21.16■□□□□ 0.98
LINC01116-202ENST00000339037 ADAMTS7Q9UKP4 1686 aa21.16■□□□□ 0.98
LINC01116-202ENST00000339037 DIAPH1O60610 1272 aaKnown RBP21.16■□□□□ 0.98
LINC01116-202ENST00000339037 CYP19A1P11511 503 aaPredicted RBP21.16■□□□□ 0.98
LINC01116-202ENST00000339037 TM4SF1P30408 202 aa21.16■□□□□ 0.98
LINC01116-202ENST00000339037 CHRNA5P30532 468 aa21.16■□□□□ 0.98
LINC01116-202ENST00000339037 IFFO2Q5TF58 517 aa21.16■□□□□ 0.98
LINC01116-202ENST00000339037 NMRK2Q9NPI5 230 aa21.16■□□□□ 0.98
LINC01116-202ENST00000339037 KCPQ6ZWJ8 1503 aa21.15■□□□□ 0.98
LINC01116-202ENST00000339037 MTHFSDQ2M296 383 aaKnown RBP21.15■□□□□ 0.98
LINC01116-202ENST00000339037 COL15A1P39059 1388 aa21.14■□□□□ 0.98
LINC01116-202ENST00000339037 APLP1P51693 650 aa21.14■□□□□ 0.97
LINC01116-202ENST00000339037 CC2D1BQ5T0F9 858 aaKnown RBP21.14■□□□□ 0.97
LINC01116-202ENST00000339037 ZBTB1Q9Y2K1 713 aa21.14■□□□□ 0.97
LINC01116-202ENST00000339037 PER1O15534 1290 aaPredicted RBP21.13■□□□□ 0.97
LINC01116-202ENST00000339037 NARFQ9UHQ1 456 aa21.13■□□□□ 0.97
LINC01116-202ENST00000339037 PCNTO95613 3336 aa21.13■□□□□ 0.97
LINC01116-202ENST00000339037 NFIXQ14938 502 aa21.12■□□□□ 0.97
LINC01116-202ENST00000339037 VSIG10Q8N0Z9 540 aa21.12■□□□□ 0.97
LINC01116-202ENST00000339037 RNF181Q9P0P0 153 aa21.12■□□□□ 0.97
LINC01116-202ENST00000339037 KDM2BQ8NHM5 1336 aa21.1■□□□□ 0.97
LINC01116-202ENST00000339037 C16orf71Q8IYS4 520 aaPredicted RBP21.1■□□□□ 0.97
LINC01116-202ENST00000339037 TTC5Q8N0Z6 440 aa21.1■□□□□ 0.97
LINC01116-202ENST00000339037 SPINK5Q9NQ38 1064 aaPredicted RBP21.1■□□□□ 0.97
LINC01116-202ENST00000339037 RBM46Q8TBY0 533 aaKnown RBP21.09■□□□□ 0.97
LINC01116-202ENST00000339037 STARD3NLO95772 234 aa21.08■□□□□ 0.97
LINC01116-202ENST00000339037 VIRMAQ69YN4 1812 aaKnown RBP21.08■□□□□ 0.96
LINC01116-202ENST00000339037 SERPINB2P05120 415 aa21.07■□□□□ 0.96
LINC01116-202ENST00000339037 CANXP27824 592 aaKnown RBP21.07■□□□□ 0.96
LINC01116-202ENST00000339037 BCL2L12Q9HB09 334 aa21.07■□□□□ 0.96
LINC01116-202ENST00000339037 UBR2Q8IWV8 1755 aa21.07■□□□□ 0.96
LINC01116-202ENST00000339037 COL3A1P02461 1466 aaPredicted RBP21.07■□□□□ 0.96
LINC01116-202ENST00000339037 U2SURPO15042 1029 aaKnown RBP21.06■□□□□ 0.96
LINC01116-202ENST00000339037 TEFQ10587 303 aa21.06■□□□□ 0.96
LINC01116-202ENST00000339037 NPC1L1Q9UHC9 1359 aa21.06■□□□□ 0.96
LINC01116-202ENST00000339037 CNGB1Q14028 1251 aaPredicted RBP21.05■□□□□ 0.96
LINC01116-202ENST00000339037 GAS2L2Q8NHY3 880 aa21.05■□□□□ 0.96
LINC01116-202ENST00000339037 NRXN2Q9P2S2 1712 aa21.04■□□□□ 0.96
LINC01116-202ENST00000339037 AFDNP55196 1824 aaKnown RBP21.04■□□□□ 0.96
LINC01116-202ENST00000339037 GNAT3A8MTJ3 354 aa21.04■□□□□ 0.96
LINC01116-202ENST00000339037 EIF5P55010 431 aaKnown RBP21.04■□□□□ 0.96
LINC01116-202ENST00000339037 RASSF7Q02833 373 aa21.04■□□□□ 0.96
LINC01116-202ENST00000339037 ZNF496Q96IT1 587 aaPredicted RBP21.04■□□□□ 0.96
LINC01116-202ENST00000339037 ZC3H4Q9UPT8 1303 aaKnown RBP21.04■□□□□ 0.96
LINC01116-202ENST00000339037 A0A087WZG4 1122 aa21.03■□□□□ 0.96
LINC01116-202ENST00000339037 FSTL1Q12841 308 aa21.03■□□□□ 0.96
LINC01116-202ENST00000339037 ZNF790Q6PG37 636 aa21.03■□□□□ 0.96
LINC01116-202ENST00000339037 BICDL1Q6ZP65 573 aa21.03■□□□□ 0.96
LINC01116-202ENST00000339037 DNAJC5GQ8N7S2 189 aa21.03■□□□□ 0.96
LINC01116-202ENST00000339037 TTLL6Q8N841 843 aa21.03■□□□□ 0.96
LINC01116-202ENST00000339037 CARMIL3Q8ND23 1372 aa21.02■□□□□ 0.96
LINC01116-202ENST00000339037 HEG1Q9ULI3 1381 aa21.02■□□□□ 0.96
LINC01116-202ENST00000339037 LMNB1P20700 586 aa21.02■□□□□ 0.96
LINC01116-202ENST00000339037 C2CD5Q86YS7 1000 aa21.02■□□□□ 0.96
LINC01116-202ENST00000339037 IL17REQ8NFR9 667 aa21.02■□□□□ 0.96
LINC01116-202ENST00000339037 RRAGCQ9HB90 399 aa21.02■□□□□ 0.96
LINC01116-202ENST00000339037 H0YIN7 160 aa21.01■□□□□ 0.95
LINC01116-202ENST00000339037 TEX13AQ9BXU3 409 aaPredicted RBP21.01■□□□□ 0.95
LINC01116-202ENST00000339037 ZNF330Q9Y3S2 320 aaPredicted RBP21.01■□□□□ 0.95
LINC01116-202ENST00000339037 SBF1O95248 1867 aa21.01■□□□□ 0.95
LINC01116-202ENST00000339037 TNRC6CQ9HCJ0 1690 aaKnown RBP21■□□□□ 0.95
LINC01116-202ENST00000339037 DLEC1Q9Y238 1755 aa21■□□□□ 0.95
LINC01116-202ENST00000339037 C1QBPQ07021 282 aaKnown RBP20.99■□□□□ 0.95
LINC01116-202ENST00000339037 WDR90Q96KV7 1748 aa20.98■□□□□ 0.95
LINC01116-202ENST00000339037 IL6STP40189 918 aaPredicted RBP20.98■□□□□ 0.95
LINC01116-202ENST00000339037 TBC1D9BQ66K14 1250 aa20.98■□□□□ 0.95
LINC01116-202ENST00000339037 FMNL2Q96PY5 1086 aa20.98■□□□□ 0.95
LINC01116-202ENST00000339037 CEMIPQ8WUJ3 1361 aa20.97■□□□□ 0.95
LINC01116-202ENST00000339037 SCN7AQ01118 1682 aa20.97■□□□□ 0.95
LINC01116-202ENST00000339037 HTRA3P83110 453 aa20.97■□□□□ 0.95
LINC01116-202ENST00000339037 NPM2Q86SE8 214 aaKnown RBP20.97■□□□□ 0.95
LINC01116-202ENST00000339037 TBC1D2BQ9UPU7 963 aa20.97■□□□□ 0.95
LINC01116-202ENST00000339037 PRELPP51888 382 aa20.96■□□□□ 0.95
LINC01116-202ENST00000339037 SMC1BQ8NDV3 1235 aa20.96■□□□□ 0.95
LINC01116-202ENST00000339037 CFAP53Q96M91 514 aa20.96■□□□□ 0.95
LINC01116-202ENST00000339037 BRIP1Q9BX63 1249 aa20.96■□□□□ 0.95
LINC01116-202ENST00000339037 SIPA1L3O60292 1781 aaPredicted RBP20.95■□□□□ 0.94
LINC01116-202ENST00000339037 GLTPD2A6NH11 291 aa20.95■□□□□ 0.94
LINC01116-202ENST00000339037 NFKBIEO00221 500 aa20.95■□□□□ 0.94
LINC01116-202ENST00000339037 PRKAR2BP31323 418 aa20.95■□□□□ 0.94
LINC01116-202ENST00000339037 PDE6BP35913 854 aa20.95■□□□□ 0.94
LINC01116-202ENST00000339037 PRR5LQ6MZQ0 368 aa20.95■□□□□ 0.94
LINC01116-202ENST00000339037 PHACTR3Q96KR7 559 aa20.95■□□□□ 0.94
LINC01116-202ENST00000339037 PDZRN3Q9UPQ7 1066 aa20.95■□□□□ 0.94
LINC01116-202ENST00000339037 BTBD11A6QL63 1104 aa20.94■□□□□ 0.94
LINC01116-202ENST00000339037 ZNF622Q969S3 477 aaKnown RBP eCLIP20.94■□□□□ 0.94
LINC01116-202ENST00000339037 KLRG1Q96E93 195 aa20.94■□□□□ 0.94
LINC01116-202ENST00000339037 RSPH6AQ9H0K4 717 aa20.94■□□□□ 0.94
LINC01116-202ENST00000339037 NPHP1O15259 732 aa20.93■□□□□ 0.94
LINC01116-202ENST00000339037 A1BGP04217 495 aa20.93■□□□□ 0.94
LINC01116-202ENST00000339037 VEGFAP15692 232 aaPredicted RBP20.93■□□□□ 0.94
LINC01116-202ENST00000339037 CNBD1Q8NA66 436 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms