RNA–Protein interactions for RNA: ENST00000338962.8

LRP1-202, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,169 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-202ENST00000338962 RNMTO43148 476 aaKnown RBP13.88□□□□□ -0.19
LRP1-202ENST00000338962 MPRIPQ6WCQ1 1025 aa13.88□□□□□ -0.19
LRP1-202ENST00000338962 LGR6Q9HBX8 967 aa13.88□□□□□ -0.19
LRP1-202ENST00000338962 ERVV-2B6SEH9 535 aa13.88□□□□□ -0.19
LRP1-202ENST00000338962 FAM182BQ5T319 152 aa13.88□□□□□ -0.19
LRP1-202ENST00000338962 CHD1LQ86WJ1 897 aa13.88□□□□□ -0.19
LRP1-202ENST00000338962 SHANK3Q9BYB0 1731 aa13.87□□□□□ -0.19
LRP1-202ENST00000338962 KDM6AO15550 1401 aaPredicted RBP13.87□□□□□ -0.19
LRP1-202ENST00000338962 LNPKQ9C0E8 428 aa13.87□□□□□ -0.19
LRP1-202ENST00000338962 TEFQ10587 303 aa13.86□□□□□ -0.19
LRP1-202ENST00000338962 SIRT2Q8IXJ6 389 aa13.86□□□□□ -0.19
LRP1-202ENST00000338962 UPF2Q9HAU5 1272 aaKnown RBP13.86□□□□□ -0.19
LRP1-202ENST00000338962 G2E3Q7L622 706 aa13.86□□□□□ -0.19
LRP1-202ENST00000338962 CCT4P50991 539 aaKnown RBP13.85□□□□□ -0.19
LRP1-202ENST00000338962 ANKRD45Q5TZF3 282 aa13.85□□□□□ -0.19
LRP1-202ENST00000338962 SLC4A10Q6U841 1118 aa13.85□□□□□ -0.19
LRP1-202ENST00000338962 FLIIQ13045 1269 aa13.85□□□□□ -0.19
LRP1-202ENST00000338962 FKBP5Q13451 457 aaPredicted RBP13.85□□□□□ -0.19
LRP1-202ENST00000338962 NECTIN2Q92692 538 aa13.85□□□□□ -0.19
LRP1-202ENST00000338962 DAXXQ9UER7 740 aaPredicted RBP13.85□□□□□ -0.19
LRP1-202ENST00000338962 F6X3S4 739 aa13.84□□□□□ -0.19
LRP1-202ENST00000338962 SEC24BO95487 1268 aa13.84□□□□□ -0.19
LRP1-202ENST00000338962 PRIM1P49642 420 aaKnown RBP13.84□□□□□ -0.19
LRP1-202ENST00000338962 HDGFL1Q5TGJ6 251 aa13.84□□□□□ -0.19
LRP1-202ENST00000338962 SLC52A2Q9HAB3 445 aa13.84□□□□□ -0.19
LRP1-202ENST00000338962 RPAP2Q8IXW5 612 aaPredicted RBP13.83□□□□□ -0.19
LRP1-202ENST00000338962 MEIS3Q99687 375 aa13.83□□□□□ -0.19
LRP1-202ENST00000338962 CHMP4AQ9BY43 222 aa13.83□□□□□ -0.19
LRP1-202ENST00000338962 BCL11BQ9C0K0 894 aaPredicted RBP13.83□□□□□ -0.19
LRP1-202ENST00000338962 ADAMTS7Q9UKP4 1686 aa13.83□□□□□ -0.2
LRP1-202ENST00000338962 ATP10DQ9P241 1426 aa13.83□□□□□ -0.2
LRP1-202ENST00000338962 BTBD11A6QL63 1104 aa13.83□□□□□ -0.2
LRP1-202ENST00000338962 KCNQ2O43526 872 aa13.83□□□□□ -0.2
LRP1-202ENST00000338962 CABP4P57796 275 aa13.83□□□□□ -0.2
LRP1-202ENST00000338962 NFATC2IPQ8NCF5 419 aa13.83□□□□□ -0.2
LRP1-202ENST00000338962 BRWD3Q6RI45 1802 aa13.83□□□□□ -0.2
LRP1-202ENST00000338962 ANKRD44Q8N8A2 993 aa13.82□□□□□ -0.2
LRP1-202ENST00000338962 ACSBG1Q96GR2 724 aa13.82□□□□□ -0.2
LRP1-202ENST00000338962 HOXB7P09629 217 aa13.82□□□□□ -0.2
LRP1-202ENST00000338962 EIF4A1P60842 406 aaKnown RBP13.82□□□□□ -0.2
LRP1-202ENST00000338962 RTL5Q5HYW3 569 aaPredicted RBP13.82□□□□□ -0.2
LRP1-202ENST00000338962 CEP85Q6P2H3 762 aa13.82□□□□□ -0.2
LRP1-202ENST00000338962 PIGBQ92521 554 aa13.82□□□□□ -0.2
LRP1-202ENST00000338962 MRC1P22897 1456 aa13.81□□□□□ -0.2
LRP1-202ENST00000338962 CACNA1FO60840 1977 aa13.81□□□□□ -0.2
LRP1-202ENST00000338962 EP400Q96L91 3159 aa13.81□□□□□ -0.2
LRP1-202ENST00000338962 TMOD3Q9NYL9 352 aa13.81□□□□□ -0.2
LRP1-202ENST00000338962 PTF1AQ7RTS3 328 aa13.81□□□□□ -0.2
LRP1-202ENST00000338962 DCTPP1Q9H773 170 aa13.81□□□□□ -0.2
LRP1-202ENST00000338962 KDM3BQ7LBC6 1761 aa13.8□□□□□ -0.2
LRP1-202ENST00000338962 TRIM37O94972 964 aa13.8□□□□□ -0.2
LRP1-202ENST00000338962 HMMRO75330 724 aa13.79□□□□□ -0.2
LRP1-202ENST00000338962 EIF2S2P20042 333 aaKnown RBP13.79□□□□□ -0.2
LRP1-202ENST00000338962 SYTL4Q96C24 671 aaPredicted RBP13.79□□□□□ -0.2
LRP1-202ENST00000338962 DEKP35659 375 aaKnown RBP13.79□□□□□ -0.2
LRP1-202ENST00000338962 BMP2KLQ5H9B9 411 aa13.79□□□□□ -0.2
LRP1-202ENST00000338962 PXDNLA1KZ92 1463 aa13.78□□□□□ -0.2
LRP1-202ENST00000338962 GNAI2P04899 355 aa13.78□□□□□ -0.2
LRP1-202ENST00000338962 CCDC125Q86Z20 511 aa13.78□□□□□ -0.2
LRP1-202ENST00000338962 KCNQ3O43525 872 aa13.78□□□□□ -0.2
LRP1-202ENST00000338962 GNAI3P08754 354 aa13.78□□□□□ -0.2
LRP1-202ENST00000338962 TBC1D32Q96NH3 1257 aa13.78□□□□□ -0.2
LRP1-202ENST00000338962 ATG3Q9NT62 314 aa13.78□□□□□ -0.2
LRP1-202ENST00000338962 ASAP1Q9ULH1 1129 aa13.77□□□□□ -0.21
LRP1-202ENST00000338962 TOGARAM1Q9Y4F4 1720 aa13.77□□□□□ -0.21
LRP1-202ENST00000338962 SCN11AQ9UI33 1791 aa13.77□□□□□ -0.21
LRP1-202ENST00000338962 PLSCR1O15162 318 aa13.76□□□□□ -0.21
LRP1-202ENST00000338962 SLC4A3P48751 1232 aa13.76□□□□□ -0.21
LRP1-202ENST00000338962 ZNF790Q6PG37 636 aa13.76□□□□□ -0.21
LRP1-202ENST00000338962 UBE2Q2Q8WVN8 375 aa13.76□□□□□ -0.21
LRP1-202ENST00000338962 PHAXQ9H814 394 aaKnown RBP13.76□□□□□ -0.21
LRP1-202ENST00000338962 CHPF2Q9P2E5 772 aa13.76□□□□□ -0.21
LRP1-202ENST00000338962 MFAP1P55081 439 aaKnown RBP13.76□□□□□ -0.21
LRP1-202ENST00000338962 SMARCC1Q92922 1105 aaPredicted RBP13.76□□□□□ -0.21
LRP1-202ENST00000338962 NHSQ6T4R5 1651 aa13.75□□□□□ -0.21
LRP1-202ENST00000338962 SLC39A6Q13433 755 aa13.75□□□□□ -0.21
LRP1-202ENST00000338962 NBR1Q14596 966 aa13.75□□□□□ -0.21
LRP1-202ENST00000338962 APBA3O96018 575 aa13.74□□□□□ -0.21
LRP1-202ENST00000338962 BECN1Q14457 450 aa13.74□□□□□ -0.21
LRP1-202ENST00000338962 UPF1Q92900 1129 aaKnown RBP eCLIP13.74□□□□□ -0.21
LRP1-202ENST00000338962 DBF4Q9UBU7 674 aaPredicted RBP13.74□□□□□ -0.21
LRP1-202ENST00000338962 DOT1LQ8TEK3 1739 aa13.74□□□□□ -0.21
LRP1-202ENST00000338962 N4BP2Q86UW6 1770 aaPredicted RBP13.74□□□□□ -0.21
LRP1-202ENST00000338962 GIGYF1O75420 1035 aaPredicted RBP13.73□□□□□ -0.21
LRP1-202ENST00000338962 APBB1O00213 710 aa13.73□□□□□ -0.21
LRP1-202ENST00000338962 UBTFL1P0CB47 393 aaPredicted RBP13.73□□□□□ -0.21
LRP1-202ENST00000338962 C22orf23Q9BZE7 217 aa13.73□□□□□ -0.21
LRP1-202ENST00000338962 SRCIN1Q9C0H9 1055 aa13.73□□□□□ -0.21
LRP1-202ENST00000338962 PALLDQ8WX93 1383 aa13.73□□□□□ -0.21
LRP1-202ENST00000338962 HEG1Q9ULI3 1381 aa13.73□□□□□ -0.21
LRP1-202ENST00000338962 SBF2Q86WG5 1849 aa13.72□□□□□ -0.21
LRP1-202ENST00000338962 PLEKHM2Q8IWE5 1019 aa13.72□□□□□ -0.21
LRP1-202ENST00000338962 TTC5Q8N0Z6 440 aa13.72□□□□□ -0.21
LRP1-202ENST00000338962 SIPA1L3O60292 1781 aaPredicted RBP13.72□□□□□ -0.21
LRP1-202ENST00000338962 SF3B2Q13435 895 aaKnown RBP13.72□□□□□ -0.21
LRP1-202ENST00000338962 VSIG10Q8N0Z9 540 aa13.72□□□□□ -0.21
LRP1-202ENST00000338962 ZNF496Q96IT1 587 aaPredicted RBP13.72□□□□□ -0.21
LRP1-202ENST00000338962 USP44Q9H0E7 712 aa13.72□□□□□ -0.21
LRP1-202ENST00000338962 PI4KAP2A4QPH2 592 aa13.71□□□□□ -0.21
LRP1-202ENST00000338962 PROM2Q8N271 834 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms