RNA–Protein interactions for RNA: ENST00000338758.11

PARVB-201, Transcript of parvin beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PARVB, Length 5,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARVB-201ENST00000338758 PRPF40BQ6NWY9 871 aaKnown RBP16.86■□□□□ 0.29
PARVB-201ENST00000338758 MAP3K12Q12852 859 aa16.86■□□□□ 0.29
PARVB-201ENST00000338758 CDC5LQ99459 802 aaKnown RBP16.86■□□□□ 0.29
PARVB-201ENST00000338758 DCAF5Q96JK2 942 aa16.86■□□□□ 0.29
PARVB-201ENST00000338758 CASTP20810 708 aaKnown RBP16.85■□□□□ 0.29
PARVB-201ENST00000338758 TSHZ3Q63HK5 1081 aa16.85■□□□□ 0.29
PARVB-201ENST00000338758 SLAIN2Q9P270 581 aa16.85■□□□□ 0.29
PARVB-201ENST00000338758 COL17A1Q9UMD9 1497 aaPredicted RBP16.85■□□□□ 0.29
PARVB-201ENST00000338758 NBPF6Q5VWK0 638 aa16.85■□□□□ 0.29
PARVB-201ENST00000338758 NBPF5PQ86XG9 351 aaPredicted RBP16.85■□□□□ 0.29
PARVB-201ENST00000338758 NBPF4Q96M43 638 aa16.85■□□□□ 0.29
PARVB-201ENST00000338758 RSPH6AQ9H0K4 717 aa16.85■□□□□ 0.29
PARVB-201ENST00000338758 SMARCC1Q92922 1105 aaPredicted RBP16.85■□□□□ 0.29
PARVB-201ENST00000338758 TMOD2Q9NZR1 351 aa16.85■□□□□ 0.29
PARVB-201ENST00000338758 VAMP4O75379 141 aa16.85■□□□□ 0.29
PARVB-201ENST00000338758 IGHDP01880 384 aa16.85■□□□□ 0.29
PARVB-201ENST00000338758 KSR2Q6VAB6 950 aa16.85■□□□□ 0.29
PARVB-201ENST00000338758 U3KPZ7 1027 aaPredicted RBP16.85■□□□□ 0.29
PARVB-201ENST00000338758 DDX46Q7L014 1031 aaKnown RBP16.84■□□□□ 0.29
PARVB-201ENST00000338758 DZIP1Q86YF9 867 aaKnown RBP16.84■□□□□ 0.29
PARVB-201ENST00000338758 RNF214Q8ND24 703 aa16.84■□□□□ 0.29
PARVB-201ENST00000338758 PIK3C2GO75747 1445 aa16.84■□□□□ 0.29
PARVB-201ENST00000338758 KINO60870 393 aaKnown RBP16.84■□□□□ 0.29
PARVB-201ENST00000338758 CCAR1Q8IX12 1150 aaKnown RBP16.84■□□□□ 0.29
PARVB-201ENST00000338758 NAPBQ9H115 298 aa16.84■□□□□ 0.29
PARVB-201ENST00000338758 ZFYVE9O95405 1425 aa16.84■□□□□ 0.29
PARVB-201ENST00000338758 CAVIN1Q6NZI2 390 aaKnown RBP16.84■□□□□ 0.29
PARVB-201ENST00000338758 MRPL50Q8N5N7 158 aaKnown RBP16.84■□□□□ 0.29
PARVB-201ENST00000338758 USP5P45974 858 aa16.83■□□□□ 0.29
PARVB-201ENST00000338758 PCDHB15Q9Y5E8 787 aa16.83■□□□□ 0.29
PARVB-201ENST00000338758 TRAK2O60296 914 aa16.83■□□□□ 0.28
PARVB-201ENST00000338758 NOC3LQ8WTT2 800 aaKnown RBP16.83■□□□□ 0.28
PARVB-201ENST00000338758 MAP3K5Q99683 1374 aa16.83■□□□□ 0.28
PARVB-201ENST00000338758 PLEKHH1Q9ULM0 1364 aa16.83■□□□□ 0.28
PARVB-201ENST00000338758 GRM8O00222 908 aa16.83■□□□□ 0.28
PARVB-201ENST00000338758 GOLIM4O00461 696 aa16.83■□□□□ 0.28
PARVB-201ENST00000338758 LMBR1LQ6UX01 489 aa16.83■□□□□ 0.28
PARVB-201ENST00000338758 ZNF396Q96N95 335 aaPredicted RBP16.83■□□□□ 0.28
PARVB-201ENST00000338758 ANO8Q9HCE9 1232 aaPredicted RBP16.83■□□□□ 0.28
PARVB-201ENST00000338758 EDC4Q6P2E9 1401 aaKnown RBP16.82■□□□□ 0.28
PARVB-201ENST00000338758 MBD3O95983 291 aa16.82■□□□□ 0.28
PARVB-201ENST00000338758 PIBF1Q8WXW3 757 aa16.82■□□□□ 0.28
PARVB-201ENST00000338758 SIRT1Q96EB6 747 aa16.82■□□□□ 0.28
PARVB-201ENST00000338758 TNNQ9UQP3 1299 aa16.82■□□□□ 0.28
PARVB-201ENST00000338758 WDR33Q9C0J8 1336 aaKnown RBP16.82■□□□□ 0.28
PARVB-201ENST00000338758 PLEKHG3A1L390 1219 aa16.82■□□□□ 0.28
PARVB-201ENST00000338758 RHPN1Q8TCX5 695 aa16.82■□□□□ 0.28
PARVB-201ENST00000338758 RNMTO43148 476 aaKnown RBP16.81■□□□□ 0.28
PARVB-201ENST00000338758 IPO7O95373 1038 aaKnown RBP16.81■□□□□ 0.28
PARVB-201ENST00000338758 IL13P35225 146 aa16.81■□□□□ 0.28
PARVB-201ENST00000338758 DDX11Q96FC9 970 aa16.81■□□□□ 0.28
PARVB-201ENST00000338758 ZSCAN31Q96LW9 406 aaPredicted RBP16.81■□□□□ 0.28
PARVB-201ENST00000338758 POLR3DP05423 398 aaPredicted RBP16.81■□□□□ 0.28
PARVB-201ENST00000338758 ALDH1L1O75891 902 aa16.81■□□□□ 0.28
PARVB-201ENST00000338758 SOGA3Q5TF21 947 aa16.81■□□□□ 0.28
PARVB-201ENST00000338758 LINS1Q8NG48 757 aa16.81■□□□□ 0.28
PARVB-201ENST00000338758 NIP7Q9Y221 180 aaKnown RBP eCLIP16.8■□□□□ 0.28
PARVB-201ENST00000338758 SETDB2Q96T68 719 aa16.8■□□□□ 0.28
PARVB-201ENST00000338758 ME1P48163 572 aa16.79■□□□□ 0.28
PARVB-201ENST00000338758 JMYQ8N9B5 988 aa16.79■□□□□ 0.28
PARVB-201ENST00000338758 ARID3AQ99856 593 aa16.79■□□□□ 0.28
PARVB-201ENST00000338758 MKNK2Q9HBH9 465 aa16.79■□□□□ 0.28
PARVB-201ENST00000338758 CDKL5O76039 1030 aa16.79■□□□□ 0.28
PARVB-201ENST00000338758 ZNF622Q969S3 477 aaKnown RBP eCLIP16.79■□□□□ 0.28
PARVB-201ENST00000338758 SBNO1A3KN83 1393 aa16.79■□□□□ 0.28
PARVB-201ENST00000338758 TXLNAP40222 546 aa16.79■□□□□ 0.28
PARVB-201ENST00000338758 KRT85P78386 507 aa16.79■□□□□ 0.28
PARVB-201ENST00000338758 CWF19L2Q2TBE0 894 aaKnown RBP16.79■□□□□ 0.28
PARVB-201ENST00000338758 OLFM4Q6UX06 510 aa16.79■□□□□ 0.28
PARVB-201ENST00000338758 EVI5LQ96CN4 794 aa16.79■□□□□ 0.28
PARVB-201ENST00000338758 ARHGEF5Q12774 1597 aa16.78■□□□□ 0.28
PARVB-201ENST00000338758 CCDC152Q4G0S7 254 aa16.78■□□□□ 0.28
PARVB-201ENST00000338758 DZIP3Q86Y13 1208 aaKnown RBP16.78■□□□□ 0.28
PARVB-201ENST00000338758 CDK5RAP3Q96JB5 506 aa16.78■□□□□ 0.28
PARVB-201ENST00000338758 ANKRD44Q8N8A2 993 aa16.78■□□□□ 0.28
PARVB-201ENST00000338758 CRACR2BQ8N4Y2 399 aaPredicted RBP16.78■□□□□ 0.28
PARVB-201ENST00000338758 PCDH11XQ9BZA7 1347 aa16.78■□□□□ 0.28
PARVB-201ENST00000338758 PCDH11YQ9BZA8 1340 aa16.78■□□□□ 0.28
PARVB-201ENST00000338758 NLRP3Q96P20 1036 aa16.78■□□□□ 0.28
PARVB-201ENST00000338758 PTPRTO14522 1441 aa16.77■□□□□ 0.28
PARVB-201ENST00000338758 RLBP1P12271 317 aa16.77■□□□□ 0.28
PARVB-201ENST00000338758 BMP2KLQ5H9B9 411 aa16.77■□□□□ 0.28
PARVB-201ENST00000338758 MPHOSPH10O00566 681 aaKnown RBP16.77■□□□□ 0.27
PARVB-201ENST00000338758 PHAXQ9H814 394 aaKnown RBP16.77■□□□□ 0.27
PARVB-201ENST00000338758 NPC1L1Q9UHC9 1359 aa16.77■□□□□ 0.27
PARVB-201ENST00000338758 CCDC83Q8IWF9 413 aa16.77■□□□□ 0.27
PARVB-201ENST00000338758 FERMT3Q86UX7 667 aa16.76■□□□□ 0.27
PARVB-201ENST00000338758 CCAR2Q8N163 923 aaKnown RBP16.76■□□□□ 0.27
PARVB-201ENST00000338758 ZNF213O14771 459 aa16.76■□□□□ 0.27
PARVB-201ENST00000338758 RANBP6O60518 1105 aaKnown RBP16.76■□□□□ 0.27
PARVB-201ENST00000338758 NAT10Q9H0A0 1025 aaKnown RBP16.76■□□□□ 0.27
PARVB-201ENST00000338758 ZNF287Q9HBT7 754 aa16.76■□□□□ 0.27
PARVB-201ENST00000338758 MYO5CQ9NQX4 1742 aa16.76■□□□□ 0.27
PARVB-201ENST00000338758 HDAC1Q13547 482 aaPredicted RBP16.76■□□□□ 0.27
PARVB-201ENST00000338758 LGR6Q9HBX8 967 aa16.76■□□□□ 0.27
PARVB-201ENST00000338758 IQSEC3Q9UPP2 1182 aaPredicted RBP16.76■□□□□ 0.27
PARVB-201ENST00000338758 TBC1D9Q6ZT07 1266 aa16.75■□□□□ 0.27
PARVB-201ENST00000338758 CCDC82Q8N4S0 544 aa16.75■□□□□ 0.27
PARVB-201ENST00000338758 PA2G4Q9UQ80 394 aaKnown RBP16.75■□□□□ 0.27
PARVB-201ENST00000338758 ATP8B2P98198 1209 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 219.8 ms