RNA–Protein interactions for RNA: ENST00000338748.9

SCNN1A-202, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3

Gene SCNN1A, Length 2,203 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-202ENST00000338748 IBTKQ9P2D0 1353 aaPredicted RBP20.15■□□□□ 0.82
SCNN1A-202ENST00000338748 TSHZ3Q63HK5 1081 aa20.15■□□□□ 0.82
SCNN1A-202ENST00000338748 TOM1L2Q6ZVM7 507 aa20.15■□□□□ 0.82
SCNN1A-202ENST00000338748 CDC45O75419 566 aa20.15■□□□□ 0.82
SCNN1A-202ENST00000338748 CHMP4AQ9BY43 222 aa20.15■□□□□ 0.82
SCNN1A-202ENST00000338748 RBM25P49756 843 aaKnown RBP20.14■□□□□ 0.81
SCNN1A-202ENST00000338748 BECN1Q14457 450 aa20.14■□□□□ 0.81
SCNN1A-202ENST00000338748 PLEKHG2Q9H7P9 1386 aa20.14■□□□□ 0.81
SCNN1A-202ENST00000338748 SALL3Q9BXA9 1300 aa20.14■□□□□ 0.81
SCNN1A-202ENST00000338748 SDSP20132 328 aa20.14■□□□□ 0.81
SCNN1A-202ENST00000338748 PPP1R42Q7Z4L9 355 aa20.13■□□□□ 0.81
SCNN1A-202ENST00000338748 SSH3Q8TE77 659 aa20.13■□□□□ 0.81
SCNN1A-202ENST00000338748 DDX21Q9NR30 783 aaKnown RBP eCLIP20.13■□□□□ 0.81
SCNN1A-202ENST00000338748 GLI3P10071 1580 aa20.13■□□□□ 0.81
SCNN1A-202ENST00000338748 PARP4Q9UKK3 1724 aaKnown RBP20.13■□□□□ 0.81
SCNN1A-202ENST00000338748 CWF19L2Q2TBE0 894 aaKnown RBP20.12■□□□□ 0.81
SCNN1A-202ENST00000338748 KSR2Q6VAB6 950 aa20.12■□□□□ 0.81
SCNN1A-202ENST00000338748 LRRCC1Q9C099 1032 aa20.12■□□□□ 0.81
SCNN1A-202ENST00000338748 PDE1AP54750 535 aa20.12■□□□□ 0.81
SCNN1A-202ENST00000338748 AIMP1Q12904 312 aaKnown RBP20.12■□□□□ 0.81
SCNN1A-202ENST00000338748 HYPKQ9NX55 129 aa20.12■□□□□ 0.81
SCNN1A-202ENST00000338748 PIP4K2AP48426 406 aaPredicted RBP20.11■□□□□ 0.81
SCNN1A-202ENST00000338748 LARP1Q6PKG0 1096 aaKnown RBP20.11■□□□□ 0.81
SCNN1A-202ENST00000338748 KIF2CQ99661 725 aa20.11■□□□□ 0.81
SCNN1A-202ENST00000338748 STRN4Q9NRL3 753 aa20.11■□□□□ 0.81
SCNN1A-202ENST00000338748 POLA2Q14181 598 aa20.11■□□□□ 0.81
SCNN1A-202ENST00000338748 SLKQ9H2G2 1235 aaPredicted RBP20.11■□□□□ 0.81
SCNN1A-202ENST00000338748 MYL6BP14649 208 aa20.1■□□□□ 0.81
SCNN1A-202ENST00000338748 USP16Q9Y5T5 823 aa20.1■□□□□ 0.81
SCNN1A-202ENST00000338748 SRGAP3O43295 1099 aa20.1■□□□□ 0.81
SCNN1A-202ENST00000338748 OSBPL3Q9H4L5 887 aa20.1■□□□□ 0.81
SCNN1A-202ENST00000338748 SHANK3Q9BYB0 1731 aa20.09■□□□□ 0.81
SCNN1A-202ENST00000338748 CABP4P57796 275 aa20.09■□□□□ 0.81
SCNN1A-202ENST00000338748 TUBGCP6Q96RT7 1819 aa20.09■□□□□ 0.81
SCNN1A-202ENST00000338748 LRP10Q7Z4F1 713 aa20.08■□□□□ 0.81
SCNN1A-202ENST00000338748 ZCRB1Q8TBF4 217 aaKnown RBP20.08■□□□□ 0.81
SCNN1A-202ENST00000338748 IL1RAPL2Q9NP60 686 aa20.08■□□□□ 0.81
SCNN1A-202ENST00000338748 NFKBIBQ15653 356 aa20.08■□□□□ 0.8
SCNN1A-202ENST00000338748 TTC5Q8N0Z6 440 aa20.08■□□□□ 0.8
SCNN1A-202ENST00000338748 PCDH11XQ9BZA7 1347 aa20.08■□□□□ 0.8
SCNN1A-202ENST00000338748 PCDH11YQ9BZA8 1340 aa20.08■□□□□ 0.8
SCNN1A-202ENST00000338748 HSP90AB1P08238 724 aaKnown RBP20.07■□□□□ 0.8
SCNN1A-202ENST00000338748 RTL5Q5HYW3 569 aaPredicted RBP20.07■□□□□ 0.8
SCNN1A-202ENST00000338748 CARD10Q9BWT7 1032 aa20.07■□□□□ 0.8
SCNN1A-202ENST00000338748 ANTXR1Q9H6X2 564 aa20.07■□□□□ 0.8
SCNN1A-202ENST00000338748 SURF6O75683 361 aaKnown RBP20.06■□□□□ 0.8
SCNN1A-202ENST00000338748 SPRYD3Q8NCJ5 442 aa20.06■□□□□ 0.8
SCNN1A-202ENST00000338748 XAGE3Q8WTP9 111 aa20.06■□□□□ 0.8
SCNN1A-202ENST00000338748 ALDH1L1O75891 902 aa20.06■□□□□ 0.8
SCNN1A-202ENST00000338748 IGKV5-2P06315 115 aa20.06■□□□□ 0.8
SCNN1A-202ENST00000338748 SNRPA1P09661 255 aaKnown RBP20.06■□□□□ 0.8
SCNN1A-202ENST00000338748 IL2RBP14784 551 aa20.06■□□□□ 0.8
SCNN1A-202ENST00000338748 MX1P20591 662 aa20.06■□□□□ 0.8
SCNN1A-202ENST00000338748 FMNL2Q96PY5 1086 aa20.06■□□□□ 0.8
SCNN1A-202ENST00000338748 LINS1Q8NG48 757 aa20.05■□□□□ 0.8
SCNN1A-202ENST00000338748 C9orf78Q9NZ63 289 aaPredicted RBP20.05■□□□□ 0.8
SCNN1A-202ENST00000338748 USP35Q9P2H5 1018 aa20.05■□□□□ 0.8
SCNN1A-202ENST00000338748 COPS6Q7L5N1 327 aa20.04■□□□□ 0.8
SCNN1A-202ENST00000338748 KAZALD1Q96I82 304 aa20.04■□□□□ 0.8
SCNN1A-202ENST00000338748 DDX58O95786 925 aaKnown RBP20.04■□□□□ 0.8
SCNN1A-202ENST00000338748 DDX54Q8TDD1 881 aaKnown RBP20.04■□□□□ 0.8
SCNN1A-202ENST00000338748 RBM42Q9BTD8 480 aaKnown RBP20.04■□□□□ 0.8
SCNN1A-202ENST00000338748 CD2BP2O95400 341 aaKnown RBP20.03■□□□□ 0.8
SCNN1A-202ENST00000338748 EVA1CP58658 441 aa20.03■□□□□ 0.8
SCNN1A-202ENST00000338748 RIC3Q7Z5B4 369 aa20.03■□□□□ 0.8
SCNN1A-202ENST00000338748 GRM8O00222 908 aa20.02■□□□□ 0.8
SCNN1A-202ENST00000338748 MTX1Q13505 466 aa20.02■□□□□ 0.8
SCNN1A-202ENST00000338748 NUTM1Q86Y26 1132 aa20.02■□□□□ 0.8
SCNN1A-202ENST00000338748 RHPN1Q8TCX5 695 aa20.02■□□□□ 0.8
SCNN1A-202ENST00000338748 SUCLG2Q96I99 432 aa20.02■□□□□ 0.8
SCNN1A-202ENST00000338748 ROBO1Q9Y6N7 1651 aa20.02■□□□□ 0.8
SCNN1A-202ENST00000338748 STAP2Q9UGK3 403 aa20.02■□□□□ 0.79
SCNN1A-202ENST00000338748 LAMB4A4D0S4 1761 aa20.01■□□□□ 0.79
SCNN1A-202ENST00000338748 UNC5CLQ8IV45 518 aa20.01■□□□□ 0.79
SCNN1A-202ENST00000338748 UBR2Q8IWV8 1755 aa20.01■□□□□ 0.79
SCNN1A-202ENST00000338748 TOGARAM1Q9Y4F4 1720 aa20.01■□□□□ 0.79
SCNN1A-202ENST00000338748 UTYO14607 1347 aa20.01■□□□□ 0.79
SCNN1A-202ENST00000338748 FRAT2O75474 233 aaPredicted RBP20■□□□□ 0.79
SCNN1A-202ENST00000338748 USP26Q9BXU7 913 aa20■□□□□ 0.79
SCNN1A-202ENST00000338748 BTG4Q9NY30 223 aa20■□□□□ 0.79
SCNN1A-202ENST00000338748 PA2G4Q9UQ80 394 aaKnown RBP20■□□□□ 0.79
SCNN1A-202ENST00000338748 KCPQ6ZWJ8 1503 aa20■□□□□ 0.79
SCNN1A-202ENST00000338748 NEURL1BA8MQ27 555 aa20■□□□□ 0.79
SCNN1A-202ENST00000338748 RAB11FIP3O75154 756 aa20■□□□□ 0.79
SCNN1A-202ENST00000338748 NKX1-1Q15270 411 aaPredicted RBP20■□□□□ 0.79
SCNN1A-202ENST00000338748 MYD88Q99836 296 aa20■□□□□ 0.79
SCNN1A-202ENST00000338748 PAPPAQ13219 1627 aa19.99■□□□□ 0.79
SCNN1A-202ENST00000338748 HSCBQ8IWL3 235 aa19.99■□□□□ 0.79
SCNN1A-202ENST00000338748 BICC1Q9H694 974 aaKnown RBP19.99■□□□□ 0.79
SCNN1A-202ENST00000338748 ERVV-2B6SEH9 535 aa19.98■□□□□ 0.79
SCNN1A-202ENST00000338748 ANKRD13DQ6ZTN6 518 aa19.98■□□□□ 0.79
SCNN1A-202ENST00000338748 KIF1BPQ96EK5 621 aa19.98■□□□□ 0.79
SCNN1A-202ENST00000338748 METTL22Q9BUU2 404 aaPredicted RBP19.98■□□□□ 0.79
SCNN1A-202ENST00000338748 NBPF26B4DH59 902 aa19.98■□□□□ 0.79
SCNN1A-202ENST00000338748 NBPF14Q5TI25 921 aa19.98■□□□□ 0.79
SCNN1A-202ENST00000338748 NBPF10Q6P3W6 841 aaKnown RBP19.98■□□□□ 0.79
SCNN1A-202ENST00000338748 NBPF15Q8N660 670 aa19.98■□□□□ 0.79
SCNN1A-202ENST00000338748 SNX21Q969T3 373 aa19.98■□□□□ 0.79
SCNN1A-202ENST00000338748 ARFGEF2Q9Y6D5 1785 aa19.98■□□□□ 0.79
SCNN1A-202ENST00000338748 PTCD1O75127 700 aaKnown RBP19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms