RNA–Protein interactions for RNA: ENST00000338458.8

ARHGEF3-202, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF3, Length 3,639 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-202ENST00000338458 CARD10Q9BWT7 1032 aa12.55□□□□□ -0.4
ARHGEF3-202ENST00000338458 KDM3BQ7LBC6 1761 aa12.55□□□□□ -0.4
ARHGEF3-202ENST00000338458 CRYBG1Q9Y4K1 1723 aa12.55□□□□□ -0.4
ARHGEF3-202ENST00000338458 ADCY9O60503 1353 aa12.55□□□□□ -0.4
ARHGEF3-202ENST00000338458 COPS6Q7L5N1 327 aa12.55□□□□□ -0.4
ARHGEF3-202ENST00000338458 XAGE3Q8WTP9 111 aa12.55□□□□□ -0.4
ARHGEF3-202ENST00000338458 SYTL4Q96C24 671 aaPredicted RBP12.55□□□□□ -0.4
ARHGEF3-202ENST00000338458 PCDH11XQ9BZA7 1347 aa12.54□□□□□ -0.4
ARHGEF3-202ENST00000338458 PCDH11YQ9BZA8 1340 aa12.54□□□□□ -0.4
ARHGEF3-202ENST00000338458 HSP90AB1P08238 724 aaKnown RBP12.54□□□□□ -0.4
ARHGEF3-202ENST00000338458 PLEKHM2Q8IWE5 1019 aa12.54□□□□□ -0.4
ARHGEF3-202ENST00000338458 ARXQ96QS3 562 aa12.54□□□□□ -0.4
ARHGEF3-202ENST00000338458 IL1RAPL2Q9NP60 686 aa12.54□□□□□ -0.4
ARHGEF3-202ENST00000338458 PPP1R42Q7Z4L9 355 aa12.54□□□□□ -0.4
ARHGEF3-202ENST00000338458 DDRGK1Q96HY6 314 aa12.54□□□□□ -0.4
ARHGEF3-202ENST00000338458 FMNL2Q96PY5 1086 aa12.54□□□□□ -0.4
ARHGEF3-202ENST00000338458 DDX21Q9NR30 783 aaKnown RBP eCLIP12.54□□□□□ -0.4
ARHGEF3-202ENST00000338458 SRGAP3O43295 1099 aa12.53□□□□□ -0.4
ARHGEF3-202ENST00000338458 SNRPA1P09661 255 aaKnown RBP12.53□□□□□ -0.4
ARHGEF3-202ENST00000338458 PDIA6Q15084 440 aa12.53□□□□□ -0.4
ARHGEF3-202ENST00000338458 KSR2Q6VAB6 950 aa12.53□□□□□ -0.4
ARHGEF3-202ENST00000338458 CCDC9Q9Y3X0 531 aaKnown RBP12.53□□□□□ -0.4
ARHGEF3-202ENST00000338458 ATP8B2P98198 1209 aa12.53□□□□□ -0.4
ARHGEF3-202ENST00000338458 HYPKQ9NX55 129 aa12.53□□□□□ -0.4
ARHGEF3-202ENST00000338458 OVOS2A0A0G2JMS6 1433 aa12.53□□□□□ -0.4
ARHGEF3-202ENST00000338458 SURF6O75683 361 aaKnown RBP12.52□□□□□ -0.4
ARHGEF3-202ENST00000338458 RTL5Q5HYW3 569 aaPredicted RBP12.52□□□□□ -0.4
ARHGEF3-202ENST00000338458 CHMP4AQ9BY43 222 aa12.52□□□□□ -0.4
ARHGEF3-202ENST00000338458 GSPT1P15170 499 aaKnown RBP12.52□□□□□ -0.4
ARHGEF3-202ENST00000338458 MYD88Q99836 296 aa12.52□□□□□ -0.41
ARHGEF3-202ENST00000338458 ATP5J2-PTCD1G3V325 749 aa12.51□□□□□ -0.41
ARHGEF3-202ENST00000338458 SPRYD3Q8NCJ5 442 aa12.51□□□□□ -0.41
ARHGEF3-202ENST00000338458 ROBO1Q9Y6N7 1651 aa12.51□□□□□ -0.41
ARHGEF3-202ENST00000338458 HEG1Q9ULI3 1381 aa12.51□□□□□ -0.41
ARHGEF3-202ENST00000338458 DDX58O95786 925 aaKnown RBP12.51□□□□□ -0.41
ARHGEF3-202ENST00000338458 A1BGP04217 495 aa12.51□□□□□ -0.41
ARHGEF3-202ENST00000338458 BMP2KLQ5H9B9 411 aa12.51□□□□□ -0.41
ARHGEF3-202ENST00000338458 C22orf23Q9BZE7 217 aa12.51□□□□□ -0.41
ARHGEF3-202ENST00000338458 OS9Q13438 667 aaPredicted RBP12.5□□□□□ -0.41
ARHGEF3-202ENST00000338458 SCN11AQ9UI33 1791 aa12.5□□□□□ -0.41
ARHGEF3-202ENST00000338458 CACNA1FO60840 1977 aa12.5□□□□□ -0.41
ARHGEF3-202ENST00000338458 RBM42Q9BTD8 480 aaKnown RBP12.5□□□□□ -0.41
ARHGEF3-202ENST00000338458 TBC1D9Q6ZT07 1266 aa12.5□□□□□ -0.41
ARHGEF3-202ENST00000338458 NUTM1Q86Y26 1132 aa12.5□□□□□ -0.41
ARHGEF3-202ENST00000338458 LRRCC1Q9C099 1032 aa12.5□□□□□ -0.41
ARHGEF3-202ENST00000338458 TMOD3Q9NYL9 352 aa12.49□□□□□ -0.41
ARHGEF3-202ENST00000338458 PA2G4Q9UQ80 394 aaKnown RBP12.49□□□□□ -0.41
ARHGEF3-202ENST00000338458 ANKRD13DQ6ZTN6 518 aa12.49□□□□□ -0.41
ARHGEF3-202ENST00000338458 TBC1D32Q96NH3 1257 aa12.49□□□□□ -0.41
ARHGEF3-202ENST00000338458 ASAP1Q9ULH1 1129 aa12.49□□□□□ -0.41
ARHGEF3-202ENST00000338458 NHSL1Q5SYE7 1610 aa12.49□□□□□ -0.41
ARHGEF3-202ENST00000338458 UBAP1LF5GYI3 381 aa12.49□□□□□ -0.41
ARHGEF3-202ENST00000338458 TTC22Q5TAA0 569 aa12.49□□□□□ -0.41
ARHGEF3-202ENST00000338458 NEXNQ0ZGT2 675 aa12.48□□□□□ -0.41
ARHGEF3-202ENST00000338458 IGKV5-2P06315 115 aa12.48□□□□□ -0.41
ARHGEF3-202ENST00000338458 ABCA3Q99758 1704 aa12.48□□□□□ -0.41
ARHGEF3-202ENST00000338458 SIPA1L3O60292 1781 aaPredicted RBP12.48□□□□□ -0.41
ARHGEF3-202ENST00000338458 MAP4K4O95819 1239 aaPredicted RBP12.48□□□□□ -0.41
ARHGEF3-202ENST00000338458 ZBTB3Q9H5J0 574 aa12.48□□□□□ -0.41
ARHGEF3-202ENST00000338458 LINS1Q8NG48 757 aa12.47□□□□□ -0.41
ARHGEF3-202ENST00000338458 SUCLG2Q96I99 432 aa12.47□□□□□ -0.41
ARHGEF3-202ENST00000338458 SIL1Q9H173 461 aa12.47□□□□□ -0.41
ARHGEF3-202ENST00000338458 NBPF26B4DH59 902 aa12.47□□□□□ -0.41
ARHGEF3-202ENST00000338458 SDSP20132 328 aa12.47□□□□□ -0.41
ARHGEF3-202ENST00000338458 NBPF14Q5TI25 921 aa12.47□□□□□ -0.41
ARHGEF3-202ENST00000338458 NBPF10Q6P3W6 841 aaKnown RBP12.47□□□□□ -0.41
ARHGEF3-202ENST00000338458 TTLL7Q6ZT98 887 aa12.47□□□□□ -0.41
ARHGEF3-202ENST00000338458 NBPF15Q8N660 670 aa12.47□□□□□ -0.41
ARHGEF3-202ENST00000338458 KLHDC4Q8TBB5 520 aa12.47□□□□□ -0.41
ARHGEF3-202ENST00000338458 SLKQ9H2G2 1235 aaPredicted RBP12.47□□□□□ -0.41
ARHGEF3-202ENST00000338458 C5P01031 1676 aa12.47□□□□□ -0.41
ARHGEF3-202ENST00000338458 TRIM6-TRIM34B2RNG4 842 aa12.47□□□□□ -0.41
ARHGEF3-202ENST00000338458 ERVV-2B6SEH9 535 aa12.47□□□□□ -0.41
ARHGEF3-202ENST00000338458 GRM8O00222 908 aa12.47□□□□□ -0.41
ARHGEF3-202ENST00000338458 EXOC5O00471 708 aa12.47□□□□□ -0.41
ARHGEF3-202ENST00000338458 RILPL2Q969X0 211 aa12.47□□□□□ -0.41
ARHGEF3-202ENST00000338458 PDE1AP54750 535 aa12.46□□□□□ -0.41
ARHGEF3-202ENST00000338458 SSH3Q8TE77 659 aa12.46□□□□□ -0.41
ARHGEF3-202ENST00000338458 PIGBQ92521 554 aa12.46□□□□□ -0.41
ARHGEF3-202ENST00000338458 ACSBG1Q96GR2 724 aa12.46□□□□□ -0.41
ARHGEF3-202ENST00000338458 TOM1O60784 492 aa12.46□□□□□ -0.42
ARHGEF3-202ENST00000338458 CDC45O75419 566 aa12.46□□□□□ -0.42
ARHGEF3-202ENST00000338458 BICC1Q9H694 974 aaKnown RBP12.46□□□□□ -0.42
ARHGEF3-202ENST00000338458 MYT1Q01538 1121 aa12.45□□□□□ -0.42
ARHGEF3-202ENST00000338458 ALDH1L1O75891 902 aa12.45□□□□□ -0.42
ARHGEF3-202ENST00000338458 UBE3BQ7Z3V4 1068 aa12.45□□□□□ -0.42
ARHGEF3-202ENST00000338458 ABCC6O95255 1503 aa12.45□□□□□ -0.42
ARHGEF3-202ENST00000338458 NEURL1BA8MQ27 555 aa12.45□□□□□ -0.42
ARHGEF3-202ENST00000338458 MX1P20591 662 aa12.45□□□□□ -0.42
ARHGEF3-202ENST00000338458 PKD1L3Q7Z443 1732 aa12.45□□□□□ -0.42
ARHGEF3-202ENST00000338458 PXDNLA1KZ92 1463 aa12.45□□□□□ -0.42
ARHGEF3-202ENST00000338458 DNAJC10Q8IXB1 793 aa12.44□□□□□ -0.42
ARHGEF3-202ENST00000338458 RHPN1Q8TCX5 695 aa12.44□□□□□ -0.42
ARHGEF3-202ENST00000338458 METTL22Q9BUU2 404 aaPredicted RBP12.44□□□□□ -0.42
ARHGEF3-202ENST00000338458 IBTKQ9P2D0 1353 aaPredicted RBP12.44□□□□□ -0.42
ARHGEF3-202ENST00000338458 CHMP3Q9Y3E7 222 aa12.44□□□□□ -0.42
ARHGEF3-202ENST00000338458 ADAMTS7Q9UKP4 1686 aa12.44□□□□□ -0.42
ARHGEF3-202ENST00000338458 NKX1-1Q15270 411 aaPredicted RBP12.44□□□□□ -0.42
ARHGEF3-202ENST00000338458 EPHA10Q5JZY3 1008 aa12.44□□□□□ -0.42
ARHGEF3-202ENST00000338458 PARP4Q9UKK3 1724 aaKnown RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 253.1 ms