RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 RPAP2Q8IXW5 612 aaPredicted RBP6.85□□□□□ -1.31
PRPF4B-201ENST00000337659 RRP7AQ9Y3A4 280 aaKnown RBP6.85□□□□□ -1.31
PRPF4B-201ENST00000337659 FAM83GA6ND36 823 aa6.85□□□□□ -1.31
PRPF4B-201ENST00000337659 TMEM57Q8N5G2 664 aa6.85□□□□□ -1.31
PRPF4B-201ENST00000337659 NOP58Q9Y2X3 529 aaKnown RBP6.85□□□□□ -1.31
PRPF4B-201ENST00000337659 MYH14Q7Z406 1995 aaKnown RBP6.85□□□□□ -1.31
PRPF4B-201ENST00000337659 TNNT2P45379 298 aaPredicted RBP6.85□□□□□ -1.31
PRPF4B-201ENST00000337659 ARXQ96QS3 562 aa6.85□□□□□ -1.31
PRPF4B-201ENST00000337659 FOCADQ5VW36 1801 aa6.85□□□□□ -1.31
PRPF4B-201ENST00000337659 CYP27B1O15528 508 aa6.85□□□□□ -1.31
PRPF4B-201ENST00000337659 NGLY1Q96IV0 654 aa6.85□□□□□ -1.31
PRPF4B-201ENST00000337659 STAP2Q9UGK3 403 aa6.85□□□□□ -1.31
PRPF4B-201ENST00000337659 TRPC5Q9UL62 973 aaPredicted RBP6.85□□□□□ -1.31
PRPF4B-201ENST00000337659 FOXO3O43524 673 aa6.84□□□□□ -1.31
PRPF4B-201ENST00000337659 ALDH1L1O75891 902 aa6.84□□□□□ -1.31
PRPF4B-201ENST00000337659 CASP7P55210 303 aa6.84□□□□□ -1.31
PRPF4B-201ENST00000337659 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.84□□□□□ -1.31
PRPF4B-201ENST00000337659 RTL9Q8NET4 1388 aa6.84□□□□□ -1.31
PRPF4B-201ENST00000337659 SPATA31A1Q5TZJ5 1347 aa6.84□□□□□ -1.31
PRPF4B-201ENST00000337659 SPATA31A5Q5VU36 1347 aa6.84□□□□□ -1.31
PRPF4B-201ENST00000337659 SPATA31A7Q8IWB4 1347 aa6.84□□□□□ -1.31
PRPF4B-201ENST00000337659 CCDC30Q5VVM6 783 aa6.84□□□□□ -1.31
PRPF4B-201ENST00000337659 SAMD1Q6SPF0 538 aaPredicted RBP6.84□□□□□ -1.31
PRPF4B-201ENST00000337659 SPG7Q9UQ90 795 aa6.84□□□□□ -1.31
PRPF4B-201ENST00000337659 TNNQ9UQP3 1299 aa6.84□□□□□ -1.31
PRPF4B-201ENST00000337659 AKAP11Q9UKA4 1901 aa6.84□□□□□ -1.32
PRPF4B-201ENST00000337659 PLIN1O60240 522 aa6.83□□□□□ -1.32
PRPF4B-201ENST00000337659 BEND3Q5T5X7 828 aa6.83□□□□□ -1.32
PRPF4B-201ENST00000337659 UBE2Q2Q8WVN8 375 aa6.83□□□□□ -1.32
PRPF4B-201ENST00000337659 PSME4Q14997 1843 aa6.83□□□□□ -1.32
PRPF4B-201ENST00000337659 TNRC6CQ9HCJ0 1690 aaKnown RBP6.83□□□□□ -1.32
PRPF4B-201ENST00000337659 RABL6Q3YEC7 729 aaPredicted RBP6.83□□□□□ -1.32
PRPF4B-201ENST00000337659 PDE4AP27815 886 aa6.83□□□□□ -1.32
PRPF4B-201ENST00000337659 IFNL2Q8IZJ0 200 aa6.83□□□□□ -1.32
PRPF4B-201ENST00000337659 SSH3Q8TE77 659 aa6.83□□□□□ -1.32
PRPF4B-201ENST00000337659 ABCC12Q96J65 1359 aa6.83□□□□□ -1.32
PRPF4B-201ENST00000337659 NEFMP07197 916 aa6.83□□□□□ -1.32
PRPF4B-201ENST00000337659 TRIM28Q13263 835 aaKnown RBP6.83□□□□□ -1.32
PRPF4B-201ENST00000337659 CEP85Q6P2H3 762 aa6.83□□□□□ -1.32
PRPF4B-201ENST00000337659 RWDD1Q9H446 243 aaPredicted RBP6.83□□□□□ -1.32
PRPF4B-201ENST00000337659 SMC4Q9NTJ3 1288 aa6.83□□□□□ -1.32
PRPF4B-201ENST00000337659 VPS72Q15906 364 aa6.82□□□□□ -1.32
PRPF4B-201ENST00000337659 MCM10Q7L590 875 aa6.82□□□□□ -1.32
PRPF4B-201ENST00000337659 PANK1Q8TE04 598 aa6.82□□□□□ -1.32
PRPF4B-201ENST00000337659 BCANQ96GW7 911 aa6.82□□□□□ -1.32
PRPF4B-201ENST00000337659 BMP2KLQ5H9B9 411 aa6.82□□□□□ -1.32
PRPF4B-201ENST00000337659 PLA2G12BQ9BX93 195 aa6.82□□□□□ -1.32
PRPF4B-201ENST00000337659 MYH15Q9Y2K3 1946 aa6.82□□□□□ -1.32
PRPF4B-201ENST00000337659 LAMB1P07942 1786 aa6.82□□□□□ -1.32
PRPF4B-201ENST00000337659 B4GALNT3Q6L9W6 998 aa6.82□□□□□ -1.32
PRPF4B-201ENST00000337659 CCDC136Q96JN2 1154 aa6.82□□□□□ -1.32
PRPF4B-201ENST00000337659 DDX21Q9NR30 783 aaKnown RBP eCLIP6.81□□□□□ -1.32
PRPF4B-201ENST00000337659 RBM25P49756 843 aaKnown RBP6.81□□□□□ -1.32
PRPF4B-201ENST00000337659 LGR6Q9HBX8 967 aa6.81□□□□□ -1.32
PRPF4B-201ENST00000337659 HYPKQ9NX55 129 aa6.81□□□□□ -1.32
PRPF4B-201ENST00000337659 RBM19Q9Y4C8 960 aaKnown RBP6.81□□□□□ -1.32
PRPF4B-201ENST00000337659 DDIT3P35638 169 aa6.81□□□□□ -1.32
PRPF4B-201ENST00000337659 FAM161AQ3B820 660 aa6.81□□□□□ -1.32
PRPF4B-201ENST00000337659 THUMPD2Q9BTF0 503 aaKnown RBP6.81□□□□□ -1.32
PRPF4B-201ENST00000337659 ZNF790Q6PG37 636 aa6.8□□□□□ -1.32
PRPF4B-201ENST00000337659 FLIIQ13045 1269 aa6.8□□□□□ -1.32
PRPF4B-201ENST00000337659 ATG3Q9NT62 314 aa6.8□□□□□ -1.32
PRPF4B-201ENST00000337659 TATP17735 454 aaPredicted RBP6.8□□□□□ -1.32
PRPF4B-201ENST00000337659 TSPYL4Q9UJ04 414 aa6.8□□□□□ -1.32
PRPF4B-201ENST00000337659 TULP1O00294 542 aaPredicted RBP6.79□□□□□ -1.32
PRPF4B-201ENST00000337659 ATP8B2P98198 1209 aa6.79□□□□□ -1.32
PRPF4B-201ENST00000337659 KCNB2Q92953 911 aa6.79□□□□□ -1.32
PRPF4B-201ENST00000337659 DBF4Q9UBU7 674 aaPredicted RBP6.79□□□□□ -1.32
PRPF4B-201ENST00000337659 IL2RBP14784 551 aa6.79□□□□□ -1.32
PRPF4B-201ENST00000337659 ANKRD31Q8N7Z5 1873 aa6.79□□□□□ -1.32
PRPF4B-201ENST00000337659 CDHR2Q9BYE9 1310 aa6.79□□□□□ -1.32
PRPF4B-201ENST00000337659 DCTN1Q14203 1278 aa6.79□□□□□ -1.32
PRPF4B-201ENST00000337659 USP44Q9H0E7 712 aa6.79□□□□□ -1.32
PRPF4B-201ENST00000337659 FBXO3Q9UK99 471 aa6.79□□□□□ -1.32
PRPF4B-201ENST00000337659 COG6Q9Y2V7 657 aa6.79□□□□□ -1.32
PRPF4B-201ENST00000337659 RTF1Q92541 710 aaKnown RBP6.79□□□□□ -1.32
PRPF4B-201ENST00000337659 ZNF530Q6P9A1 599 aaPredicted RBP6.78□□□□□ -1.32
PRPF4B-201ENST00000337659 AK7Q96M32 723 aa6.78□□□□□ -1.32
PRPF4B-201ENST00000337659 KAZALD1Q96I82 304 aa6.78□□□□□ -1.32
PRPF4B-201ENST00000337659 COL4A1P02462 1669 aa6.78□□□□□ -1.32
PRPF4B-201ENST00000337659 KSR2Q6VAB6 950 aa6.78□□□□□ -1.32
PRPF4B-201ENST00000337659 ECM29Q5VYK3 1845 aa6.78□□□□□ -1.32
PRPF4B-201ENST00000337659 RAB11FIP3O75154 756 aa6.77□□□□□ -1.33
PRPF4B-201ENST00000337659 GNAI3P08754 354 aa6.77□□□□□ -1.33
PRPF4B-201ENST00000337659 RFX5P48382 616 aaPredicted RBP6.77□□□□□ -1.33
PRPF4B-201ENST00000337659 G2E3Q7L622 706 aa6.77□□□□□ -1.33
PRPF4B-201ENST00000337659 CHD1LQ86WJ1 897 aa6.77□□□□□ -1.33
PRPF4B-201ENST00000337659 PDZRN3Q9UPQ7 1066 aa6.77□□□□□ -1.33
PRPF4B-201ENST00000337659 GJD4Q96KN9 370 aaPredicted RBP6.77□□□□□ -1.33
PRPF4B-201ENST00000337659 ZNF609O15014 1411 aa6.77□□□□□ -1.33
PRPF4B-201ENST00000337659 UNC5CLQ8IV45 518 aa6.77□□□□□ -1.33
PRPF4B-201ENST00000337659 TBC1D32Q96NH3 1257 aa6.77□□□□□ -1.33
PRPF4B-201ENST00000337659 ISCA1Q9BUE6 129 aa6.77□□□□□ -1.33
PRPF4B-201ENST00000337659 GPR108Q9NPR9 543 aa6.77□□□□□ -1.33
PRPF4B-201ENST00000337659 BTBD11A6QL63 1104 aa6.77□□□□□ -1.33
PRPF4B-201ENST00000337659 ZCRB1Q8TBF4 217 aaKnown RBP6.77□□□□□ -1.33
PRPF4B-201ENST00000337659 BRCA1P38398 1863 aaKnown RBP6.76□□□□□ -1.33
PRPF4B-201ENST00000337659 CDK5RAP2Q96SN8 1893 aa6.76□□□□□ -1.33
PRPF4B-201ENST00000337659 IGSF3O75054 1194 aa6.76□□□□□ -1.33
PRPF4B-201ENST00000337659 LINS1Q8NG48 757 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms