RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 NUCB1Q02818 461 aa7.76□□□□□ -1.17
HMG20A-201ENST00000336216 MAPK8IP2Q13387 824 aaPredicted RBP7.76□□□□□ -1.17
HMG20A-201ENST00000336216 TCEANC2Q96MN5 208 aa7.76□□□□□ -1.17
HMG20A-201ENST00000336216 YTHDC2Q9H6S0 1430 aaKnown RBP7.76□□□□□ -1.17
HMG20A-201ENST00000336216 PPLO60437 1756 aa7.76□□□□□ -1.17
HMG20A-201ENST00000336216 GPTP24298 496 aa7.75□□□□□ -1.17
HMG20A-201ENST00000336216 KDM5AP29375 1690 aaKnown RBP7.75□□□□□ -1.17
HMG20A-201ENST00000336216 RRP12Q5JTH9 1297 aaKnown RBP7.75□□□□□ -1.17
HMG20A-201ENST00000336216 NEXMIFQ5QGS0 1516 aa7.75□□□□□ -1.17
HMG20A-201ENST00000336216 RNF20Q5VTR2 975 aa7.75□□□□□ -1.17
HMG20A-201ENST00000336216 SPATA31D1Q6ZQQ2 1576 aa7.75□□□□□ -1.17
HMG20A-201ENST00000336216 SMC5Q8IY18 1101 aa7.75□□□□□ -1.17
HMG20A-201ENST00000336216 ANKRD24Q8TF21 1146 aa7.75□□□□□ -1.17
HMG20A-201ENST00000336216 NLRP1Q9C000 1473 aa7.75□□□□□ -1.17
HMG20A-201ENST00000336216 A2ML1A8K2U0 1454 aa7.75□□□□□ -1.17
HMG20A-201ENST00000336216 POLR3AO14802 1390 aaPredicted RBP7.75□□□□□ -1.17
HMG20A-201ENST00000336216 OFD1O75665 1012 aa7.75□□□□□ -1.17
HMG20A-201ENST00000336216 HDAC1Q13547 482 aaPredicted RBP7.75□□□□□ -1.17
HMG20A-201ENST00000336216 RASSF8Q8NHQ8 419 aa7.75□□□□□ -1.17
HMG20A-201ENST00000336216 DNAAF4Q8WXU2 420 aa7.75□□□□□ -1.17
HMG20A-201ENST00000336216 MAP3K2Q9Y2U5 619 aa7.75□□□□□ -1.17
HMG20A-201ENST00000336216 PIK3C2BO00750 1634 aa7.75□□□□□ -1.17
HMG20A-201ENST00000336216 SPDYE4A6NLX3 237 aa7.75□□□□□ -1.17
HMG20A-201ENST00000336216 G3V3G9 751 aa7.75□□□□□ -1.17
HMG20A-201ENST00000336216 CDK11BP21127 795 aaKnown RBP7.75□□□□□ -1.17
HMG20A-201ENST00000336216 BMP2KLQ5H9B9 411 aa7.75□□□□□ -1.17
HMG20A-201ENST00000336216 DCAF8Q5TAQ9 597 aa7.75□□□□□ -1.17
HMG20A-201ENST00000336216 MRPL50Q8N5N7 158 aaKnown RBP7.75□□□□□ -1.17
HMG20A-201ENST00000336216 KCNH5Q8NCM2 988 aa7.75□□□□□ -1.17
HMG20A-201ENST00000336216 JAKMIP1Q96N16 626 aaKnown RBP7.75□□□□□ -1.17
HMG20A-201ENST00000336216 TSPY26PQ9H489 355 aa7.75□□□□□ -1.17
HMG20A-201ENST00000336216 PA2G4Q9UQ80 394 aaKnown RBP7.75□□□□□ -1.17
HMG20A-201ENST00000336216 MYOM1P52179 1685 aa7.75□□□□□ -1.17
HMG20A-201ENST00000336216 NFXL1Q6ZNB6 911 aa7.75□□□□□ -1.17
HMG20A-201ENST00000336216 UBE3BQ7Z3V4 1068 aa7.75□□□□□ -1.17
HMG20A-201ENST00000336216 C17orf53Q8N3J3 647 aaPredicted RBP7.75□□□□□ -1.17
HMG20A-201ENST00000336216 DDX11Q96FC9 970 aa7.75□□□□□ -1.17
HMG20A-201ENST00000336216 SNRKQ9NRH2 765 aa7.75□□□□□ -1.17
HMG20A-201ENST00000336216 USP25Q9UHP3 1055 aa7.75□□□□□ -1.17
HMG20A-201ENST00000336216 TMEM2Q9UHN6 1383 aa7.74□□□□□ -1.17
HMG20A-201ENST00000336216 CWF19L2Q2TBE0 894 aaKnown RBP7.74□□□□□ -1.17
HMG20A-201ENST00000336216 ZNF771Q7L3S4 317 aaPredicted RBP7.74□□□□□ -1.17
HMG20A-201ENST00000336216 MAP7D2Q96T17 732 aa7.74□□□□□ -1.17
HMG20A-201ENST00000336216 CNNM1Q9NRU3 951 aa7.74□□□□□ -1.17
HMG20A-201ENST00000336216 ZBTB40Q9NUA8 1239 aa7.74□□□□□ -1.17
HMG20A-201ENST00000336216 SDSP20132 328 aa7.74□□□□□ -1.17
HMG20A-201ENST00000336216 SAMD1Q6SPF0 538 aaPredicted RBP7.74□□□□□ -1.17
HMG20A-201ENST00000336216 NFATC2IPQ8NCF5 419 aa7.74□□□□□ -1.17
HMG20A-201ENST00000336216 FMNL2Q96PY5 1086 aa7.74□□□□□ -1.17
HMG20A-201ENST00000336216 LGR6Q9HBX8 967 aa7.74□□□□□ -1.17
HMG20A-201ENST00000336216 A0A087WZG4 1122 aa7.74□□□□□ -1.17
HMG20A-201ENST00000336216 TRDNQ13061 729 aa7.74□□□□□ -1.17
HMG20A-201ENST00000336216 PRPF40BQ6NWY9 871 aaKnown RBP7.74□□□□□ -1.17
HMG20A-201ENST00000336216 ABCC11Q96J66 1382 aa7.73□□□□□ -1.17
HMG20A-201ENST00000336216 SNX21Q969T3 373 aa7.73□□□□□ -1.17
HMG20A-201ENST00000336216 TTC12Q9H892 705 aaPredicted RBP7.73□□□□□ -1.17
HMG20A-201ENST00000336216 NPC1L1Q9UHC9 1359 aa7.73□□□□□ -1.17
HMG20A-201ENST00000336216 BECN2A8MW95 431 aa7.73□□□□□ -1.17
HMG20A-201ENST00000336216 CASTP20810 708 aaKnown RBP7.73□□□□□ -1.17
HMG20A-201ENST00000336216 RALYLQ86SE5 291 aaKnown RBP7.73□□□□□ -1.17
HMG20A-201ENST00000336216 ATP6V1DQ9Y5K8 247 aa7.73□□□□□ -1.17
HMG20A-201ENST00000336216 TMEM131LA2VDJ0 1609 aa7.73□□□□□ -1.17
HMG20A-201ENST00000336216 PHF14O94880 888 aa7.73□□□□□ -1.17
HMG20A-201ENST00000336216 GCP02774 474 aa7.73□□□□□ -1.17
HMG20A-201ENST00000336216 IL13P35225 146 aa7.73□□□□□ -1.17
HMG20A-201ENST00000336216 CCDC57Q2TAC2 916 aa7.73□□□□□ -1.17
HMG20A-201ENST00000336216 DBF4Q9UBU7 674 aaPredicted RBP7.73□□□□□ -1.17
HMG20A-201ENST00000336216 PES1O00541 588 aaKnown RBP7.72□□□□□ -1.17
HMG20A-201ENST00000336216 COPS6Q7L5N1 327 aa7.72□□□□□ -1.17
HMG20A-201ENST00000336216 RBM25P49756 843 aaKnown RBP7.72□□□□□ -1.17
HMG20A-201ENST00000336216 KIF1BPQ96EK5 621 aa7.72□□□□□ -1.17
HMG20A-201ENST00000336216 NSD2O96028 1365 aa7.72□□□□□ -1.17
HMG20A-201ENST00000336216 HTATSF1O43719 755 aaKnown RBP7.72□□□□□ -1.17
HMG20A-201ENST00000336216 MBD3O95983 291 aa7.72□□□□□ -1.17
HMG20A-201ENST00000336216 CCDC83Q8IWF9 413 aa7.72□□□□□ -1.17
HMG20A-201ENST00000336216 CCDC82Q8N4S0 544 aa7.72□□□□□ -1.17
HMG20A-201ENST00000336216 KLHDC4Q8TBB5 520 aa7.72□□□□□ -1.17
HMG20A-201ENST00000336216 ZKSCAN5Q9Y2L8 839 aa7.72□□□□□ -1.17
HMG20A-201ENST00000336216 ADGRB1O14514 1584 aa7.72□□□□□ -1.17
HMG20A-201ENST00000336216 ZBTB7BO15156 539 aaPredicted RBP7.71□□□□□ -1.17
HMG20A-201ENST00000336216 IDH1O75874 414 aaKnown RBP7.71□□□□□ -1.17
HMG20A-201ENST00000336216 SASS6Q6UVJ0 657 aa7.71□□□□□ -1.17
HMG20A-201ENST00000336216 RAB11FIP4Q86YS3 637 aa7.71□□□□□ -1.17
HMG20A-201ENST00000336216 CEP126Q9P2H0 1117 aa7.71□□□□□ -1.17
HMG20A-201ENST00000336216 MEX3CQ5U5Q3 659 aaKnown RBP7.71□□□□□ -1.18
HMG20A-201ENST00000336216 CYP46A1Q9Y6A2 500 aa7.71□□□□□ -1.18
HMG20A-201ENST00000336216 INSRP06213 1382 aa7.71□□□□□ -1.18
HMG20A-201ENST00000336216 LARP1BQ659C4 914 aaKnown RBP7.71□□□□□ -1.18
HMG20A-201ENST00000336216 KIF6Q6ZMV9 814 aa7.71□□□□□ -1.18
HMG20A-201ENST00000336216 PIBF1Q8WXW3 757 aa7.71□□□□□ -1.18
HMG20A-201ENST00000336216 QRICH2Q9H0J4 1663 aa7.71□□□□□ -1.18
HMG20A-201ENST00000336216 HCLS1P14317 486 aaPredicted RBP7.7□□□□□ -1.18
HMG20A-201ENST00000336216 GUCY1B3Q02153 619 aa7.7□□□□□ -1.18
HMG20A-201ENST00000336216 XAGE3Q8WTP9 111 aa7.7□□□□□ -1.18
HMG20A-201ENST00000336216 SIRT1Q96EB6 747 aa7.7□□□□□ -1.18
HMG20A-201ENST00000336216 CWC22Q9HCG8 908 aaKnown RBP7.7□□□□□ -1.18
HMG20A-201ENST00000336216 ALKQ9UM73 1620 aa7.7□□□□□ -1.18
HMG20A-201ENST00000336216 GOLGA6L6A8MZA4 724 aa7.7□□□□□ -1.18
HMG20A-201ENST00000336216 GOLGA6L19H0YKK7 550 aa7.7□□□□□ -1.18
HMG20A-201ENST00000336216 KCNQ3O43525 872 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms