RNA–Protein interactions for RNA: ENST00000334318.10

PTBP3-202, Transcript of polypyrimidine tract binding protein 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTBP3, Length 7,990 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP3-202ENST00000334318 H7C1D1 291 aa7.43□□□□□ -1.22
PTBP3-202ENST00000334318 CLASRPQ8N2M8 674 aaKnown RBP7.43□□□□□ -1.22
PTBP3-202ENST00000334318 DCPSQ96C86 337 aaKnown RBP7.43□□□□□ -1.22
PTBP3-202ENST00000334318 CABP5Q9NP86 173 aa7.43□□□□□ -1.22
PTBP3-202ENST00000334318 USPL1Q5W0Q7 1092 aa7.43□□□□□ -1.22
PTBP3-202ENST00000334318 HSP90AB3PQ58FF7 597 aa7.43□□□□□ -1.22
PTBP3-202ENST00000334318 FAM13BQ9NYF5 915 aa7.43□□□□□ -1.22
PTBP3-202ENST00000334318 SRGAP3O43295 1099 aa7.43□□□□□ -1.22
PTBP3-202ENST00000334318 CAVIN1Q6NZI2 390 aaKnown RBP7.43□□□□□ -1.22
PTBP3-202ENST00000334318 UBE3BQ7Z3V4 1068 aa7.43□□□□□ -1.22
PTBP3-202ENST00000334318 ZNF592Q92610 1267 aa7.43□□□□□ -1.22
PTBP3-202ENST00000334318 C14orf93Q9H972 538 aaKnown RBP7.43□□□□□ -1.22
PTBP3-202ENST00000334318 KDM6BO15054 1643 aa7.43□□□□□ -1.22
PTBP3-202ENST00000334318 ABCC5O15440 1437 aa7.43□□□□□ -1.22
PTBP3-202ENST00000334318 SNRPA1P09661 255 aaKnown RBP7.43□□□□□ -1.22
PTBP3-202ENST00000334318 NASPP49321 788 aaPredicted RBP7.43□□□□□ -1.22
PTBP3-202ENST00000334318 KIF22Q14807 665 aa7.43□□□□□ -1.22
PTBP3-202ENST00000334318 RABEP1Q15276 862 aa7.43□□□□□ -1.22
PTBP3-202ENST00000334318 DNAJC10Q8IXB1 793 aa7.43□□□□□ -1.22
PTBP3-202ENST00000334318 MAP3K2Q9Y2U5 619 aa7.43□□□□□ -1.22
PTBP3-202ENST00000334318 SKIV2LQ15477 1246 aaKnown RBP7.42□□□□□ -1.22
PTBP3-202ENST00000334318 XAGE3Q8WTP9 111 aa7.42□□□□□ -1.22
PTBP3-202ENST00000334318 TPM3P06753 285 aa7.42□□□□□ -1.22
PTBP3-202ENST00000334318 CT47B1P0C2W7 299 aaPredicted RBP7.42□□□□□ -1.22
PTBP3-202ENST00000334318 SP4Q02446 784 aa7.42□□□□□ -1.22
PTBP3-202ENST00000334318 GJD4Q96KN9 370 aaPredicted RBP7.42□□□□□ -1.22
PTBP3-202ENST00000334318 TEX13AQ9BXU3 409 aaPredicted RBP7.42□□□□□ -1.22
PTBP3-202ENST00000334318 PCDH11XQ9BZA7 1347 aa7.42□□□□□ -1.22
PTBP3-202ENST00000334318 PCDH11YQ9BZA8 1340 aa7.42□□□□□ -1.22
PTBP3-202ENST00000334318 SYCP2Q9BX26 1530 aa7.42□□□□□ -1.22
PTBP3-202ENST00000334318 CCDC152Q4G0S7 254 aa7.42□□□□□ -1.22
PTBP3-202ENST00000334318 TCP10Q12799 353 aa7.42□□□□□ -1.22
PTBP3-202ENST00000334318 COPS6Q7L5N1 327 aa7.42□□□□□ -1.22
PTBP3-202ENST00000334318 FNBP4Q8N3X1 1017 aaPredicted RBP7.42□□□□□ -1.22
PTBP3-202ENST00000334318 CEP170Q5SW79 1584 aa7.42□□□□□ -1.22
PTBP3-202ENST00000334318 PRPF40AO75400 957 aaKnown RBP7.42□□□□□ -1.22
PTBP3-202ENST00000334318 SLC5A1P13866 664 aa7.42□□□□□ -1.22
PTBP3-202ENST00000334318 ERFEQ4G0M1 354 aa7.42□□□□□ -1.22
PTBP3-202ENST00000334318 NOD1Q9Y239 953 aa7.42□□□□□ -1.22
PTBP3-202ENST00000334318 DALRD3Q5D0E6 543 aaKnown RBP7.41□□□□□ -1.22
PTBP3-202ENST00000334318 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.41□□□□□ -1.228e-7■□□□□ 8.7
PTBP3-202ENST00000334318 A1BGP04217 495 aa7.41□□□□□ -1.22
PTBP3-202ENST00000334318 CCDC82Q8N4S0 544 aa7.41□□□□□ -1.22
PTBP3-202ENST00000334318 TPD52L1Q16890 204 aaPredicted RBP7.41□□□□□ -1.22
PTBP3-202ENST00000334318 GNAI2P04899 355 aa7.41□□□□□ -1.22
PTBP3-202ENST00000334318 CCAR2Q8N163 923 aaKnown RBP7.41□□□□□ -1.22
PTBP3-202ENST00000334318 SMCR8Q8TEV9 937 aaPredicted RBP7.41□□□□□ -1.22
PTBP3-202ENST00000334318 PAGR1Q9BTK6 254 aa7.41□□□□□ -1.22
PTBP3-202ENST00000334318 EYA3Q99504 573 aa7.41□□□□□ -1.22
PTBP3-202ENST00000334318 CCDC8Q9H0W5 538 aaPredicted RBP7.41□□□□□ -1.22
PTBP3-202ENST00000334318 TMPOP42166 694 aaKnown RBP7.41□□□□□ -1.22
PTBP3-202ENST00000334318 ZFYVE16Q7Z3T8 1539 aa7.41□□□□□ -1.22
PTBP3-202ENST00000334318 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.41□□□□□ -1.22
PTBP3-202ENST00000334318 C21orf2O43822 256 aa7.41□□□□□ -1.22
PTBP3-202ENST00000334318 RANBP6O60518 1105 aaKnown RBP7.41□□□□□ -1.22
PTBP3-202ENST00000334318 SSBP05455 408 aaKnown RBP eCLIP7.41□□□□□ -1.22
PTBP3-202ENST00000334318 CCDC73Q6ZRK6 1079 aa7.41□□□□□ -1.22
PTBP3-202ENST00000334318 CHD1LQ86WJ1 897 aa7.41□□□□□ -1.22
PTBP3-202ENST00000334318 SULF1Q8IWU6 871 aa7.41□□□□□ -1.22
PTBP3-202ENST00000334318 KRT18P05783 430 aaKnown RBP7.4□□□□□ -1.22
PTBP3-202ENST00000334318 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.4□□□□□ -1.22
PTBP3-202ENST00000334318 CNTROBQ8N137 903 aa7.4□□□□□ -1.22
PTBP3-202ENST00000334318 NINLQ9Y2I6 1382 aa7.4□□□□□ -1.22
PTBP3-202ENST00000334318 NACAP1Q9BZK3 213 aa7.4□□□□□ -1.22
PTBP3-202ENST00000334318 NYXQ9GZU5 481 aa7.4□□□□□ -1.22
PTBP3-202ENST00000334318 HOXC9P31274 260 aa7.4□□□□□ -1.22
PTBP3-202ENST00000334318 SASS6Q6UVJ0 657 aa7.4□□□□□ -1.22
PTBP3-202ENST00000334318 TMEM57Q8N5G2 664 aa7.4□□□□□ -1.22
PTBP3-202ENST00000334318 SRP68Q9UHB9 627 aaKnown RBP7.4□□□□□ -1.22
PTBP3-202ENST00000334318 CWC25Q9NXE8 425 aaPredicted RBP7.4□□□□□ -1.22
PTBP3-202ENST00000334318 MBD3O95983 291 aa7.4□□□□□ -1.23
PTBP3-202ENST00000334318 TCP10L2B9ZVM9 353 aa7.4□□□□□ -1.23
PTBP3-202ENST00000334318 STK3Q13188 491 aa7.39□□□□□ -1.23
PTBP3-202ENST00000334318 SAP30BPQ9UHR5 308 aaKnown RBP7.39□□□□□ -1.23
PTBP3-202ENST00000334318 KIAA0232Q92628 1395 aa7.39□□□□□ -1.23
PTBP3-202ENST00000334318 RAD17O75943 681 aa7.39□□□□□ -1.23
PTBP3-202ENST00000334318 MMP10P09238 476 aa7.39□□□□□ -1.23
PTBP3-202ENST00000334318 MAP3K9P80192 1104 aa7.39□□□□□ -1.23
PTBP3-202ENST00000334318 NCOA1Q15788 1441 aa7.39□□□□□ -1.23
PTBP3-202ENST00000334318 PCMTD1Q96MG8 357 aaPredicted RBP7.39□□□□□ -1.23
PTBP3-202ENST00000334318 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.39□□□□□ -1.23
PTBP3-202ENST00000334318 IRS4O14654 1257 aaPredicted RBP7.39□□□□□ -1.23
PTBP3-202ENST00000334318 RARSP54136 660 aaKnown RBP7.39□□□□□ -1.23
PTBP3-202ENST00000334318 SOGA3Q5TF21 947 aa7.39□□□□□ -1.23
PTBP3-202ENST00000334318 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.39□□□□□ -1.231e-7■■■■■ 37.2
PTBP3-202ENST00000334318 ZNF444Q8N0Y2 327 aaPredicted RBP7.39□□□□□ -1.23
PTBP3-202ENST00000334318 FIBPO43427 364 aa7.39□□□□□ -1.23
PTBP3-202ENST00000334318 MCM4P33991 863 aa7.39□□□□□ -1.23
PTBP3-202ENST00000334318 MCM2P49736 904 aa7.39□□□□□ -1.23
PTBP3-202ENST00000334318 K7ELQ4 463 aaPredicted RBP7.39□□□□□ -1.23
PTBP3-202ENST00000334318 SSH1Q8WYL5 1049 aa7.39□□□□□ -1.23
PTBP3-202ENST00000334318 FAM89AQ96GI7 184 aa7.39□□□□□ -1.23
PTBP3-202ENST00000334318 THOC2Q8NI27 1593 aaKnown RBP7.39□□□□□ -1.23
PTBP3-202ENST00000334318 TMEM2Q9UHN6 1383 aa7.39□□□□□ -1.23
PTBP3-202ENST00000334318 SART3Q15020 963 aaKnown RBP7.38□□□□□ -1.23
PTBP3-202ENST00000334318 GADL1Q6ZQY3 521 aa7.38□□□□□ -1.23
PTBP3-202ENST00000334318 CEP89Q96ST8 783 aa7.38□□□□□ -1.23
PTBP3-202ENST00000334318 CHPF2Q9P2E5 772 aa7.38□□□□□ -1.23
PTBP3-202ENST00000334318 CIZ1Q9ULV3 898 aaPredicted RBP7.38□□□□□ -1.23
PTBP3-202ENST00000334318 SORBS3O60504 671 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms