RNA–Protein interactions for RNA: ENST00000334271.7

AP1S3-201, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 2

Gene AP1S3, Length 2,201 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-201ENST00000334271 CHRNA2Q15822 529 aa13.21□□□□□ -0.29
AP1S3-201ENST00000334271 CCDC30Q5VVM6 783 aa13.21□□□□□ -0.29
AP1S3-201ENST00000334271 TOM1L2Q6ZVM7 507 aa13.21□□□□□ -0.29
AP1S3-201ENST00000334271 SPATA31A6Q5VVP1 1343 aa13.21□□□□□ -0.29
AP1S3-201ENST00000334271 HEG1Q9ULI3 1381 aa13.21□□□□□ -0.29
AP1S3-201ENST00000334271 N4BP2Q86UW6 1770 aaPredicted RBP13.21□□□□□ -0.29
AP1S3-201ENST00000334271 PLIN1O60240 522 aa13.21□□□□□ -0.29
AP1S3-201ENST00000334271 FAM193AP78312 1265 aa13.21□□□□□ -0.29
AP1S3-201ENST00000334271 MVPQ14764 893 aaKnown RBP13.21□□□□□ -0.29
AP1S3-201ENST00000334271 HSP90AB4PQ58FF6 505 aa13.21□□□□□ -0.29
AP1S3-201ENST00000334271 C8orf58Q8NAV2 365 aa13.21□□□□□ -0.29
AP1S3-201ENST00000334271 CERKQ8TCT0 537 aa13.2□□□□□ -0.3
AP1S3-201ENST00000334271 GZF1Q9H116 711 aaPredicted RBP13.2□□□□□ -0.3
AP1S3-201ENST00000334271 IBTKQ9P2D0 1353 aaPredicted RBP13.2□□□□□ -0.3
AP1S3-201ENST00000334271 DISP2A7MBM2 1401 aa13.2□□□□□ -0.3
AP1S3-201ENST00000334271 ERVV-2B6SEH9 535 aa13.2□□□□□ -0.3
AP1S3-201ENST00000334271 CENPQQ7L2Z9 268 aaPredicted RBP13.2□□□□□ -0.3
AP1S3-201ENST00000334271 PXDNLA1KZ92 1463 aa13.2□□□□□ -0.3
AP1S3-201ENST00000334271 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.19□□□□□ -0.3
AP1S3-201ENST00000334271 LOC102724159A0A0B4J2E5 919 aa13.19□□□□□ -0.3
AP1S3-201ENST00000334271 PWP2Q15269 919 aaKnown RBP13.19□□□□□ -0.3
AP1S3-201ENST00000334271 ZCRB1Q8TBF4 217 aaKnown RBP13.19□□□□□ -0.3
AP1S3-201ENST00000334271 SHANK3Q9BYB0 1731 aa13.19□□□□□ -0.3
AP1S3-201ENST00000334271 UBAP1LF5GYI3 381 aa13.19□□□□□ -0.3
AP1S3-201ENST00000334271 TRIM27P14373 513 aa13.19□□□□□ -0.3
AP1S3-201ENST00000334271 FRAT1Q92837 279 aaPredicted RBP13.19□□□□□ -0.3
AP1S3-201ENST00000334271 CLUAP1Q96AJ1 413 aa13.19□□□□□ -0.3
AP1S3-201ENST00000334271 TRAIPQ9BWF2 469 aa13.19□□□□□ -0.3
AP1S3-201ENST00000334271 STK31Q9BXU1 1019 aa13.19□□□□□ -0.3
AP1S3-201ENST00000334271 NOB1Q9ULX3 412 aaKnown RBP13.19□□□□□ -0.3
AP1S3-201ENST00000334271 SLIT2O94813 1529 aa13.18□□□□□ -0.3
AP1S3-201ENST00000334271 ABCC4O15439 1325 aa13.18□□□□□ -0.3
AP1S3-201ENST00000334271 TSPYL6Q8N831 410 aa13.18□□□□□ -0.3
AP1S3-201ENST00000334271 SLC52A2Q9HAB3 445 aa13.18□□□□□ -0.3
AP1S3-201ENST00000334271 BTBD11A6QL63 1104 aa13.17□□□□□ -0.3
AP1S3-201ENST00000334271 EIF4A1P60842 406 aaKnown RBP13.17□□□□□ -0.3
AP1S3-201ENST00000334271 C20orf194Q5TEA3 1177 aa13.17□□□□□ -0.3
AP1S3-201ENST00000334271 CCDC82Q8N4S0 544 aa13.17□□□□□ -0.3
AP1S3-201ENST00000334271 KDM6AO15550 1401 aaPredicted RBP13.17□□□□□ -0.3
AP1S3-201ENST00000334271 PAPPAQ13219 1627 aa13.17□□□□□ -0.3
AP1S3-201ENST00000334271 GTF2E1P29083 439 aaPredicted RBP13.17□□□□□ -0.3
AP1S3-201ENST00000334271 TMTC2Q8N394 836 aa13.17□□□□□ -0.3
AP1S3-201ENST00000334271 INTS3Q68E01 1043 aaKnown RBP13.16□□□□□ -0.3
AP1S3-201ENST00000334271 LGR6Q9HBX8 967 aa13.16□□□□□ -0.3
AP1S3-201ENST00000334271 BTG4Q9NY30 223 aa13.16□□□□□ -0.3
AP1S3-201ENST00000334271 LAMB4A4D0S4 1761 aa13.15□□□□□ -0.3
AP1S3-201ENST00000334271 UBR2Q8IWV8 1755 aa13.15□□□□□ -0.3
AP1S3-201ENST00000334271 ERBB4Q15303 1308 aa13.15□□□□□ -0.31
AP1S3-201ENST00000334271 KDM2BQ8NHM5 1336 aa13.15□□□□□ -0.31
AP1S3-201ENST00000334271 BARGINQ6ZT62 677 aa13.15□□□□□ -0.31
AP1S3-201ENST00000334271 B4GALNT3Q6L9W6 998 aa13.14□□□□□ -0.31
AP1S3-201ENST00000334271 LARP1Q6PKG0 1096 aaKnown RBP13.14□□□□□ -0.31
AP1S3-201ENST00000334271 MPRIPQ6WCQ1 1025 aa13.14□□□□□ -0.31
AP1S3-201ENST00000334271 PATL2C9JE40 543 aaKnown RBP13.13□□□□□ -0.31
AP1S3-201ENST00000334271 CYP27B1O15528 508 aa13.13□□□□□ -0.31
AP1S3-201ENST00000334271 TNS2Q63HR2 1409 aa13.13□□□□□ -0.31
AP1S3-201ENST00000334271 CCT4P50991 539 aaKnown RBP13.13□□□□□ -0.31
AP1S3-201ENST00000334271 PANK1Q8TE04 598 aa13.13□□□□□ -0.31
AP1S3-201ENST00000334271 RWDD1Q9H446 243 aaPredicted RBP13.13□□□□□ -0.31
AP1S3-201ENST00000334271 COG6Q9Y2V7 657 aa13.13□□□□□ -0.31
AP1S3-201ENST00000334271 RIPOR2Q9Y4F9 1068 aa13.13□□□□□ -0.31
AP1S3-201ENST00000334271 HDAC1Q13547 482 aaPredicted RBP13.12□□□□□ -0.31
AP1S3-201ENST00000334271 ZNF790Q6PG37 636 aa13.12□□□□□ -0.31
AP1S3-201ENST00000334271 BCL2L13Q9BXK5 485 aa13.12□□□□□ -0.31
AP1S3-201ENST00000334271 SPATA31A1Q5TZJ5 1347 aa13.12□□□□□ -0.31
AP1S3-201ENST00000334271 RLBP1P12271 317 aa13.12□□□□□ -0.31
AP1S3-201ENST00000334271 SGSM3Q96HU1 749 aa13.12□□□□□ -0.31
AP1S3-201ENST00000334271 ZBTB40Q9NUA8 1239 aa13.12□□□□□ -0.31
AP1S3-201ENST00000334271 DBF4Q9UBU7 674 aaPredicted RBP13.12□□□□□ -0.31
AP1S3-201ENST00000334271 GIGYF1O75420 1035 aaPredicted RBP13.11□□□□□ -0.31
AP1S3-201ENST00000334271 SLC4A2P04920 1241 aa13.11□□□□□ -0.31
AP1S3-201ENST00000334271 CABP4P57796 275 aa13.11□□□□□ -0.31
AP1S3-201ENST00000334271 HDGFL1Q5TGJ6 251 aa13.11□□□□□ -0.31
AP1S3-201ENST00000334271 IFNLR1Q8IU57 520 aaPredicted RBP13.11□□□□□ -0.31
AP1S3-201ENST00000334271 STRN4Q9NRL3 753 aa13.11□□□□□ -0.31
AP1S3-201ENST00000334271 RGS12O14924 1447 aa13.11□□□□□ -0.31
AP1S3-201ENST00000334271 HDAC5Q9UQL6 1122 aa13.11□□□□□ -0.31
AP1S3-201ENST00000334271 SPATA31A5Q5VU36 1347 aa13.1□□□□□ -0.31
AP1S3-201ENST00000334271 SPATA31A7Q8IWB4 1347 aa13.1□□□□□ -0.31
AP1S3-201ENST00000334271 PIP4K2BP78356 416 aa13.1□□□□□ -0.31
AP1S3-201ENST00000334271 TTC5Q8N0Z6 440 aa13.1□□□□□ -0.31
AP1S3-201ENST00000334271 FNBP4Q8N3X1 1017 aaPredicted RBP13.1□□□□□ -0.31
AP1S3-201ENST00000334271 TMEM57Q8N5G2 664 aa13.1□□□□□ -0.31
AP1S3-201ENST00000334271 FMNL2Q96PY5 1086 aa13.1□□□□□ -0.31
AP1S3-201ENST00000334271 HYPKQ9NX55 129 aa13.1□□□□□ -0.31
AP1S3-201ENST00000334271 CICQ96RK0 1608 aaPredicted RBP13.1□□□□□ -0.31
AP1S3-201ENST00000334271 ATP10DQ9P241 1426 aa13.09□□□□□ -0.31
AP1S3-201ENST00000334271 ELL2O00472 640 aaPredicted RBP13.09□□□□□ -0.31
AP1S3-201ENST00000334271 TCERG1O14776 1098 aaKnown RBP13.09□□□□□ -0.31
AP1S3-201ENST00000334271 BRD1O95696 1058 aa13.09□□□□□ -0.31
AP1S3-201ENST00000334271 ITPRIPQ8IWB1 547 aa13.09□□□□□ -0.31
AP1S3-201ENST00000334271 EXOC5O00471 708 aa13.09□□□□□ -0.31
AP1S3-201ENST00000334271 ZBTB7BO15156 539 aaPredicted RBP13.09□□□□□ -0.31
AP1S3-201ENST00000334271 SNRPA1P09661 255 aaKnown RBP13.09□□□□□ -0.31
AP1S3-201ENST00000334271 UNC5CLQ8IV45 518 aa13.09□□□□□ -0.31
AP1S3-201ENST00000334271 TEX13AQ9BXU3 409 aaPredicted RBP13.09□□□□□ -0.31
AP1S3-201ENST00000334271 MIS18AQ9NYP9 233 aa13.09□□□□□ -0.31
AP1S3-201ENST00000334271 PHF14O94880 888 aa13.08□□□□□ -0.32
AP1S3-201ENST00000334271 VPS72Q15906 364 aa13.08□□□□□ -0.32
AP1S3-201ENST00000334271 FLIIQ13045 1269 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms