RNA–Protein interactions for RNA: ENST00000333990.10

POLR1B-202, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 4,376 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-202ENST00000333990 BLOC1S2Q6QNY1 142 aa13.39□□□□□ -0.27
POLR1B-202ENST00000333990 FOXD4L3Q6VB84 417 aaPredicted RBP13.39□□□□□ -0.27
POLR1B-202ENST00000333990 SETDB2Q96T68 719 aa13.39□□□□□ -0.27
POLR1B-202ENST00000333990 TET3O43151 1660 aa13.38□□□□□ -0.27
POLR1B-202ENST00000333990 SLC4A3P48751 1232 aa13.38□□□□□ -0.27
POLR1B-202ENST00000333990 CCDC152Q4G0S7 254 aa13.38□□□□□ -0.27
POLR1B-202ENST00000333990 TRIM22Q8IYM9 498 aa13.38□□□□□ -0.27
POLR1B-202ENST00000333990 METP08581 1390 aa13.38□□□□□ -0.27
POLR1B-202ENST00000333990 GOLGA6L19H0YKK7 550 aa13.38□□□□□ -0.27
POLR1B-202ENST00000333990 IL13P35225 146 aa13.38□□□□□ -0.27
POLR1B-202ENST00000333990 LINS1Q8NG48 757 aa13.38□□□□□ -0.27
POLR1B-202ENST00000333990 ABCA9Q8IUA7 1624 aa13.38□□□□□ -0.27
POLR1B-202ENST00000333990 KIF1BO60333 1816 aa13.38□□□□□ -0.27
POLR1B-202ENST00000333990 TPM2P07951 284 aa13.38□□□□□ -0.27
POLR1B-202ENST00000333990 CCDC73Q6ZRK6 1079 aa13.38□□□□□ -0.27
POLR1B-202ENST00000333990 NUTM1Q86Y26 1132 aa13.38□□□□□ -0.27
POLR1B-202ENST00000333990 ZSCAN29Q8IWY8 852 aaPredicted RBP13.38□□□□□ -0.27
POLR1B-202ENST00000333990 RTCBQ9Y3I0 505 aaKnown RBP13.37□□□□□ -0.27
POLR1B-202ENST00000333990 HOXB7P09629 217 aa13.37□□□□□ -0.27
POLR1B-202ENST00000333990 NLRP3Q96P20 1036 aa13.37□□□□□ -0.27
POLR1B-202ENST00000333990 ANXA1P04083 346 aa13.36□□□□□ -0.27
POLR1B-202ENST00000333990 NBPF14Q5TI25 921 aa13.36□□□□□ -0.27
POLR1B-202ENST00000333990 UBAC1Q9BSL1 405 aa13.36□□□□□ -0.27
POLR1B-202ENST00000333990 NYXQ9GZU5 481 aa13.36□□□□□ -0.27
POLR1B-202ENST00000333990 MTMR7Q9Y216 660 aa13.36□□□□□ -0.27
POLR1B-202ENST00000333990 FAM135BQ49AJ0 1406 aa13.36□□□□□ -0.27
POLR1B-202ENST00000333990 IMMTQ16891 758 aaKnown RBP13.36□□□□□ -0.27
POLR1B-202ENST00000333990 NCBP3Q53F19 620 aaKnown RBP13.36□□□□□ -0.27
POLR1B-202ENST00000333990 CREBRFQ8IUR6 639 aa13.36□□□□□ -0.27
POLR1B-202ENST00000333990 CCAR1Q8IX12 1150 aaKnown RBP13.36□□□□□ -0.27
POLR1B-202ENST00000333990 PHACTR3Q96KR7 559 aa13.36□□□□□ -0.27
POLR1B-202ENST00000333990 CWC27Q6UX04 472 aaKnown RBP13.36□□□□□ -0.27
POLR1B-202ENST00000333990 KDM5CP41229 1560 aa13.36□□□□□ -0.27
POLR1B-202ENST00000333990 C6orf229H3BNL8 230 aa13.36□□□□□ -0.27
POLR1B-202ENST00000333990 LDHCP07864 332 aa13.36□□□□□ -0.27
POLR1B-202ENST00000333990 DZIP1Q86YF9 867 aaKnown RBP13.36□□□□□ -0.27
POLR1B-202ENST00000333990 ANKRD20A12PQ8NF67 263 aa13.36□□□□□ -0.27
POLR1B-202ENST00000333990 ECHDC1Q9NTX5 307 aa13.36□□□□□ -0.27
POLR1B-202ENST00000333990 PRDM15P57071 1507 aaPredicted RBP13.35□□□□□ -0.27
POLR1B-202ENST00000333990 PDIA4P13667 645 aaKnown RBP13.35□□□□□ -0.27
POLR1B-202ENST00000333990 C8orf58Q8NAV2 365 aa13.35□□□□□ -0.27
POLR1B-202ENST00000333990 U3KPZ7 1027 aaPredicted RBP13.35□□□□□ -0.27
POLR1B-202ENST00000333990 CCDC69A6NI79 296 aa13.35□□□□□ -0.27
POLR1B-202ENST00000333990 GRM8O00222 908 aa13.35□□□□□ -0.27
POLR1B-202ENST00000333990 MAP4K4O95819 1239 aaPredicted RBP13.35□□□□□ -0.27
POLR1B-202ENST00000333990 TTF1Q15361 905 aaPredicted RBP13.35□□□□□ -0.27
POLR1B-202ENST00000333990 ATP2B2Q01814 1243 aa13.35□□□□□ -0.27
POLR1B-202ENST00000333990 TPTE2Q6XPS3 522 aa13.35□□□□□ -0.27
POLR1B-202ENST00000333990 BOLA2Q9H3K6 86 aa13.35□□□□□ -0.27
POLR1B-202ENST00000333990 CDKL5O76039 1030 aa13.34□□□□□ -0.27
POLR1B-202ENST00000333990 DZIP3Q86Y13 1208 aaKnown RBP13.34□□□□□ -0.27
POLR1B-202ENST00000333990 DDX21Q9NR30 783 aaKnown RBP eCLIP13.34□□□□□ -0.27
POLR1B-202ENST00000333990 ZSCAN31Q96LW9 406 aaPredicted RBP13.34□□□□□ -0.27
POLR1B-202ENST00000333990 TSR1Q2NL82 804 aaKnown RBP13.34□□□□□ -0.27
POLR1B-202ENST00000333990 TPM1P09493 284 aa13.34□□□□□ -0.27
POLR1B-202ENST00000333990 C20orf194Q5TEA3 1177 aa13.34□□□□□ -0.27
POLR1B-202ENST00000333990 UQCRFS1P1P0C7P4 283 aa13.33□□□□□ -0.28
POLR1B-202ENST00000333990 ANKRD18AQ8IVF6 992 aa13.33□□□□□ -0.28
POLR1B-202ENST00000333990 NIP7Q9Y221 180 aaKnown RBP eCLIP13.33□□□□□ -0.28
POLR1B-202ENST00000333990 VAMP4O75379 141 aa13.33□□□□□ -0.28
POLR1B-202ENST00000333990 MRPL50Q8N5N7 158 aaKnown RBP13.33□□□□□ -0.28
POLR1B-202ENST00000333990 CCDC8Q9H0W5 538 aaPredicted RBP13.33□□□□□ -0.28
POLR1B-202ENST00000333990 KDM5AP29375 1690 aaKnown RBP13.33□□□□□ -0.28
POLR1B-202ENST00000333990 PES1O00541 588 aaKnown RBP13.33□□□□□ -0.28
POLR1B-202ENST00000333990 TPM3P06753 285 aa13.33□□□□□ -0.28
POLR1B-202ENST00000333990 SPTY2D1Q68D10 685 aaPredicted RBP13.33□□□□□ -0.28
POLR1B-202ENST00000333990 ZNF790Q6PG37 636 aa13.33□□□□□ -0.28
POLR1B-202ENST00000333990 BACH2Q9BYV9 841 aa13.33□□□□□ -0.28
POLR1B-202ENST00000333990 USP21Q9UK80 565 aa13.33□□□□□ -0.28
POLR1B-202ENST00000333990 USP5P45974 858 aa13.32□□□□□ -0.28
POLR1B-202ENST00000333990 UTP14AQ9BVJ6 771 aaKnown RBP13.32□□□□□ -0.28
POLR1B-202ENST00000333990 NAPBQ9H115 298 aa13.32□□□□□ -0.28
POLR1B-202ENST00000333990 SPINK5Q9NQ38 1064 aaPredicted RBP13.32□□□□□ -0.28
POLR1B-202ENST00000333990 TFCP2L1Q9NZI6 479 aa13.32□□□□□ -0.28
POLR1B-202ENST00000333990 ATP7BP35670 1465 aa13.32□□□□□ -0.28
POLR1B-202ENST00000333990 EVI5LQ96CN4 794 aa13.32□□□□□ -0.28
POLR1B-202ENST00000333990 IQGAP3Q86VI3 1631 aa13.31□□□□□ -0.28
POLR1B-202ENST00000333990 JMYQ8N9B5 988 aa13.31□□□□□ -0.28
POLR1B-202ENST00000333990 SOGA3Q5TF21 947 aa13.31□□□□□ -0.28
POLR1B-202ENST00000333990 ZNF622Q969S3 477 aaKnown RBP eCLIP13.31□□□□□ -0.28
POLR1B-202ENST00000333990 ZNF396Q96N95 335 aaPredicted RBP13.31□□□□□ -0.28
POLR1B-202ENST00000333990 SMARCA5O60264 1052 aaPredicted RBP13.31□□□□□ -0.28
POLR1B-202ENST00000333990 IL15P40933 162 aaPredicted RBP13.31□□□□□ -0.28
POLR1B-202ENST00000333990 INSRP06213 1382 aa13.31□□□□□ -0.28
POLR1B-202ENST00000333990 ROBO2Q9HCK4 1378 aa13.31□□□□□ -0.28
POLR1B-202ENST00000333990 A2ML1A8K2U0 1454 aa13.31□□□□□ -0.28
POLR1B-202ENST00000333990 POLR3DP05423 398 aaPredicted RBP13.3□□□□□ -0.28
POLR1B-202ENST00000333990 FOSBP53539 338 aa13.3□□□□□ -0.28
POLR1B-202ENST00000333990 JAKMIP1Q96N16 626 aaKnown RBP13.3□□□□□ -0.28
POLR1B-202ENST00000333990 RNF41Q9H4P4 317 aaPredicted RBP13.3□□□□□ -0.28
POLR1B-202ENST00000333990 TXLNAP40222 546 aa13.3□□□□□ -0.28
POLR1B-202ENST00000333990 CRACR2BQ8N4Y2 399 aaPredicted RBP13.3□□□□□ -0.28
POLR1B-202ENST00000333990 ANKRD44Q8N8A2 993 aa13.3□□□□□ -0.28
POLR1B-202ENST00000333990 DDX17Q92841 729 aaKnown RBP13.3□□□□□ -0.28
POLR1B-202ENST00000333990 RIMBP3CA6NJZ7 1639 aa13.3□□□□□ -0.28
POLR1B-202ENST00000333990 RIMBP3BA6NNM3 1639 aa13.3□□□□□ -0.28
POLR1B-202ENST00000333990 RIMBP3Q9UFD9 1639 aa13.3□□□□□ -0.28
POLR1B-202ENST00000333990 BAG3O95817 575 aa13.3□□□□□ -0.28
POLR1B-202ENST00000333990 POLD1P28340 1107 aa13.3□□□□□ -0.28
POLR1B-202ENST00000333990 HDAC1Q13547 482 aaPredicted RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms