RNA–Protein interactions for RNA: ENST00000333861.4

CCDC87-201, Transcript of coiled-coil domain containing 87, humanhuman

APPRIS P1 BASIC

Gene CCDC87, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC87-201ENST00000333861 VPS37CA5D8V6 355 aaPredicted RBP13.35□□□□□ -0.27
CCDC87-201ENST00000333861 KDM4AO75164 1064 aa13.35□□□□□ -0.27
CCDC87-201ENST00000333861 SLFN14P0C7P3 912 aa13.35□□□□□ -0.27
CCDC87-201ENST00000333861 LUZP1Q86V48 1076 aa13.35□□□□□ -0.27
CCDC87-201ENST00000333861 DRC7Q8IY82 874 aa13.35□□□□□ -0.27
CCDC87-201ENST00000333861 SYAP1Q96A49 352 aaPredicted RBP13.35□□□□□ -0.27
CCDC87-201ENST00000333861 ANKRD44Q8N8A2 993 aa13.34□□□□□ -0.27
CCDC87-201ENST00000333861 IFT57Q9NWB7 429 aa13.34□□□□□ -0.27
CCDC87-201ENST00000333861 ARID5BQ14865 1188 aa13.34□□□□□ -0.27
CCDC87-201ENST00000333861 DIAPH3Q9NSV4 1193 aa13.34□□□□□ -0.27
CCDC87-201ENST00000333861 CCDC83Q8IWF9 413 aa13.33□□□□□ -0.27
CCDC87-201ENST00000333861 KNDC1Q76NI1 1749 aa13.33□□□□□ -0.28
CCDC87-201ENST00000333861 REC8O95072 547 aa13.33□□□□□ -0.28
CCDC87-201ENST00000333861 GNAI1P63096 354 aa13.33□□□□□ -0.28
CCDC87-201ENST00000333861 SULT6B1Q6IMI4 303 aa13.33□□□□□ -0.28
CCDC87-201ENST00000333861 OGFRQ9NZT2 677 aa13.33□□□□□ -0.28
CCDC87-201ENST00000333861 CTNNA3Q9UI47 895 aa13.33□□□□□ -0.28
CCDC87-201ENST00000333861 ADAMTSL3P82987 1691 aa13.33□□□□□ -0.28
CCDC87-201ENST00000333861 RASEFQ8IZ41 740 aa13.33□□□□□ -0.28
CCDC87-201ENST00000333861 ERCC4Q92889 916 aaPredicted RBP13.33□□□□□ -0.28
CCDC87-201ENST00000333861 RBM33Q96EV2 1170 aaKnown RBP13.33□□□□□ -0.28
CCDC87-201ENST00000333861 TFIP11Q9UBB9 837 aaKnown RBP13.33□□□□□ -0.28
CCDC87-201ENST00000333861 FCHSD2O94868 740 aa13.32□□□□□ -0.28
CCDC87-201ENST00000333861 ANKLE2Q86XL3 938 aa13.32□□□□□ -0.28
CCDC87-201ENST00000333861 RTF1Q92541 710 aaKnown RBP13.32□□□□□ -0.28
CCDC87-201ENST00000333861 ESYT1Q9BSJ8 1104 aa13.32□□□□□ -0.28
CCDC87-201ENST00000333861 API5Q9BZZ5 524 aaKnown RBP13.32□□□□□ -0.28
CCDC87-201ENST00000333861 QRICH2Q9H0J4 1663 aa13.32□□□□□ -0.28
CCDC87-201ENST00000333861 TULP4Q9NRJ4 1543 aa13.31□□□□□ -0.28
CCDC87-201ENST00000333861 CEBPZQ03701 1054 aaKnown RBP13.31□□□□□ -0.28
CCDC87-201ENST00000333861 HSPA2P54652 639 aa13.31□□□□□ -0.28
CCDC87-201ENST00000333861 CWC27Q6UX04 472 aaKnown RBP13.31□□□□□ -0.28
CCDC87-201ENST00000333861 CCDC186Q7Z3E2 898 aa13.31□□□□□ -0.28
CCDC87-201ENST00000333861 TERF2IPQ9NYB0 399 aa13.31□□□□□ -0.28
CCDC87-201ENST00000333861 AMOTL2Q9Y2J4 779 aa13.31□□□□□ -0.28
CCDC87-201ENST00000333861 MYO3AQ8NEV4 1616 aa13.31□□□□□ -0.28
CCDC87-201ENST00000333861 PLEKHG1Q9ULL1 1385 aa13.31□□□□□ -0.28
CCDC87-201ENST00000333861 HDGFL2Q7Z4V5 671 aaPredicted RBP13.3□□□□□ -0.28
CCDC87-201ENST00000333861 ADAMTS13Q76LX8 1427 aa13.3□□□□□ -0.28
CCDC87-201ENST00000333861 LRRC7Q96NW7 1537 aa13.3□□□□□ -0.28
CCDC87-201ENST00000333861 PHF14O94880 888 aa13.3□□□□□ -0.28
CCDC87-201ENST00000333861 TNNT1P13805 278 aa13.3□□□□□ -0.28
CCDC87-201ENST00000333861 CCDC183Q5T5S1 534 aa13.3□□□□□ -0.28
CCDC87-201ENST00000333861 CEP170BQ9Y4F5 1589 aaPredicted RBP13.3□□□□□ -0.28
CCDC87-201ENST00000333861 CTIFO43310 598 aaKnown RBP13.29□□□□□ -0.28
CCDC87-201ENST00000333861 STK3Q13188 491 aa13.29□□□□□ -0.28
CCDC87-201ENST00000333861 TRIM34Q9BYJ4 488 aa13.29□□□□□ -0.28
CCDC87-201ENST00000333861 TRMT1Q9NXH9 659 aaKnown RBP13.29□□□□□ -0.28
CCDC87-201ENST00000333861 CAPN2P17655 700 aa13.29□□□□□ -0.28
CCDC87-201ENST00000333861 SYT1P21579 422 aa13.29□□□□□ -0.28
CCDC87-201ENST00000333861 CHMLP26374 656 aa13.29□□□□□ -0.28
CCDC87-201ENST00000333861 RTL1A6NKG5 1358 aa13.29□□□□□ -0.28
CCDC87-201ENST00000333861 IL16Q14005 1332 aa13.29□□□□□ -0.28
CCDC87-201ENST00000333861 MX1P20591 662 aa13.29□□□□□ -0.28
CCDC87-201ENST00000333861 AK2P54819 239 aa13.29□□□□□ -0.28
CCDC87-201ENST00000333861 TERF2Q15554 542 aa13.29□□□□□ -0.28
CCDC87-201ENST00000333861 NRXN3Q9Y4C0 1643 aa13.28□□□□□ -0.28
CCDC87-201ENST00000333861 KDM4FA0A1W2PPD8 638 aa13.28□□□□□ -0.28
CCDC87-201ENST00000333861 CFAP44Q96MT7 982 aa13.28□□□□□ -0.28
CCDC87-201ENST00000333861 ARHGEF28Q8N1W1 1705 aaKnown RBP13.28□□□□□ -0.28
CCDC87-201ENST00000333861 ROBO2Q9HCK4 1378 aa13.28□□□□□ -0.28
CCDC87-201ENST00000333861 ANXA1P04083 346 aa13.28□□□□□ -0.28
CCDC87-201ENST00000333861 LIG1P18858 919 aa13.28□□□□□ -0.28
CCDC87-201ENST00000333861 CHMP4CQ96CF2 233 aa13.28□□□□□ -0.28
CCDC87-201ENST00000333861 FEZ1Q99689 392 aa13.28□□□□□ -0.28
CCDC87-201ENST00000333861 DDX41Q9UJV9 622 aaKnown RBP13.28□□□□□ -0.28
CCDC87-201ENST00000333861 ADGRB2O60241 1585 aa13.27□□□□□ -0.28
CCDC87-201ENST00000333861 SETD1BQ9UPS6 1966 aaKnown RBP13.27□□□□□ -0.28
CCDC87-201ENST00000333861 USP27XA6NNY8 438 aa13.27□□□□□ -0.28
CCDC87-201ENST00000333861 ADCK5Q3MIX3 580 aa13.27□□□□□ -0.28
CCDC87-201ENST00000333861 FAM184AQ8NB25 1140 aa13.27□□□□□ -0.28
CCDC87-201ENST00000333861 KIF18AQ8NI77 898 aa13.27□□□□□ -0.28
CCDC87-201ENST00000333861 DDX11Q96FC9 970 aa13.27□□□□□ -0.28
CCDC87-201ENST00000333861 LRRFIP2Q9Y608 721 aaKnown RBP13.27□□□□□ -0.28
CCDC87-201ENST00000333861 ATP10DQ9P241 1426 aa13.27□□□□□ -0.28
CCDC87-201ENST00000333861 RPAP1Q9BWH6 1393 aaPredicted RBP13.27□□□□□ -0.29
CCDC87-201ENST00000333861 PTPN21Q16825 1174 aa13.27□□□□□ -0.29
CCDC87-201ENST00000333861 KMT5BQ4FZB7 885 aa13.27□□□□□ -0.29
CCDC87-201ENST00000333861 MED14O60244 1454 aa13.27□□□□□ -0.29
CCDC87-201ENST00000333861 COL3A1P02461 1466 aaPredicted RBP13.27□□□□□ -0.29
CCDC87-201ENST00000333861 KCNA6P17658 529 aa13.26□□□□□ -0.29
CCDC87-201ENST00000333861 IL13P35225 146 aa13.26□□□□□ -0.29
CCDC87-201ENST00000333861 TPD52L1Q16890 204 aaPredicted RBP13.26□□□□□ -0.29
CCDC87-201ENST00000333861 UVSSAQ2YD98 709 aa13.26□□□□□ -0.29
CCDC87-201ENST00000333861 TMX1Q9H3N1 280 aa13.26□□□□□ -0.29
CCDC87-201ENST00000333861 TBX22Q9Y458 520 aa13.26□□□□□ -0.29
CCDC87-201ENST00000333861 RUFY3Q7L099 469 aa13.26□□□□□ -0.29
CCDC87-201ENST00000333861 CCDC9Q9Y3X0 531 aaKnown RBP13.26□□□□□ -0.29
CCDC87-201ENST00000333861 ARHGAP23Q9P227 1491 aa13.26□□□□□ -0.29
CCDC87-201ENST00000333861 ZNF853P0CG23 659 aa13.26□□□□□ -0.29
CCDC87-201ENST00000333861 CASTP20810 708 aaKnown RBP13.26□□□□□ -0.29
CCDC87-201ENST00000333861 GJB2P29033 226 aa13.26□□□□□ -0.29
CCDC87-201ENST00000333861 CCDC112Q8NEF3 446 aa13.26□□□□□ -0.29
CCDC87-201ENST00000333861 GTF3C6Q969F1 213 aa13.26□□□□□ -0.29
CCDC87-201ENST00000333861 TIGD1Q96MW7 591 aa13.26□□□□□ -0.29
CCDC87-201ENST00000333861 SLIT1O75093 1534 aa13.25□□□□□ -0.29
CCDC87-201ENST00000333861 ZNF215Q9UL58 517 aaPredicted RBP13.25□□□□□ -0.29
CCDC87-201ENST00000333861 PTPRUQ92729 1446 aa13.25□□□□□ -0.29
CCDC87-201ENST00000333861 STX6O43752 255 aa13.25□□□□□ -0.29
CCDC87-201ENST00000333861 HSP90AB2PQ58FF8 381 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms