RNA–Protein interactions for RNA: ENST00000333617.8

LSAMP-201, Transcript of limbic system associated membrane protein, humanhuman

TSL 2

Gene LSAMP, Length 1,561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-201ENST00000333617 NUTM2GQ5VZR2 741 aa11.12□□□□□ -0.63
LSAMP-201ENST00000333617 FAM83GA6ND36 823 aa11.11□□□□□ -0.63
LSAMP-201ENST00000333617 SPDYE16A6NNV3 312 aaPredicted RBP11.11□□□□□ -0.63
LSAMP-201ENST00000333617 PPP1R3GB7ZBB8 358 aa11.11□□□□□ -0.63
LSAMP-201ENST00000333617 PSME1Q06323 249 aa11.11□□□□□ -0.63
LSAMP-201ENST00000333617 ATF7IPQ6VMQ6 1270 aa11.11□□□□□ -0.63
LSAMP-201ENST00000333617 MBIPQ9NS73 344 aa11.11□□□□□ -0.63
LSAMP-201ENST00000333617 NOB1Q9ULX3 412 aaKnown RBP11.11□□□□□ -0.63
LSAMP-201ENST00000333617 NFAT5O94916 1531 aa11.11□□□□□ -0.63
LSAMP-201ENST00000333617 RGPD5Q99666 1765 aa11.11□□□□□ -0.63
LSAMP-201ENST00000333617 KDRP35968 1356 aa11.11□□□□□ -0.63
LSAMP-201ENST00000333617 TRIM27P14373 513 aa11.11□□□□□ -0.63
LSAMP-201ENST00000333617 PDIA6Q15084 440 aa11.11□□□□□ -0.63
LSAMP-201ENST00000333617 SKAP1Q86WV1 359 aa11.11□□□□□ -0.63
LSAMP-201ENST00000333617 RTL1A6NKG5 1358 aa11.1□□□□□ -0.63
LSAMP-201ENST00000333617 IGSF1Q8N6C5 1336 aa11.1□□□□□ -0.63
LSAMP-201ENST00000333617 VAMP4O75379 141 aa11.1□□□□□ -0.63
LSAMP-201ENST00000333617 IGHDP01880 384 aa11.1□□□□□ -0.63
LSAMP-201ENST00000333617 HOXC9P31274 260 aa11.1□□□□□ -0.63
LSAMP-201ENST00000333617 BRPF1P55201 1214 aaPredicted RBP11.1□□□□□ -0.63
LSAMP-201ENST00000333617 DCTN1Q14203 1278 aa11.1□□□□□ -0.63
LSAMP-201ENST00000333617 PROSER2Q86WR7 435 aaPredicted RBP11.1□□□□□ -0.63
LSAMP-201ENST00000333617 EYA1Q99502 592 aa11.1□□□□□ -0.63
LSAMP-201ENST00000333617 BACH2Q9BYV9 841 aa11.1□□□□□ -0.63
LSAMP-201ENST00000333617 LOC100996750A0A140TA64 210 aa11.09□□□□□ -0.63
LSAMP-201ENST00000333617 RGS20O76081 388 aa11.09□□□□□ -0.63
LSAMP-201ENST00000333617 DDX12PQ92771 950 aa11.09□□□□□ -0.63
LSAMP-201ENST00000333617 KRTAP4-6Q9BYQ5 205 aa11.09□□□□□ -0.63
LSAMP-201ENST00000333617 DDX19BQ9UMR2 479 aa11.09□□□□□ -0.63
LSAMP-201ENST00000333617 ARIH1Q9Y4X5 557 aaPredicted RBP11.09□□□□□ -0.63
LSAMP-201ENST00000333617 XIRP1Q702N8 1843 aaKnown RBP11.08□□□□□ -0.63
LSAMP-201ENST00000333617 LRRC37A3O60309 1634 aa11.08□□□□□ -0.64
LSAMP-201ENST00000333617 TWISTNBQ3B726 338 aaPredicted RBP11.08□□□□□ -0.64
LSAMP-201ENST00000333617 KCTD12Q96CX2 325 aaKnown RBP11.08□□□□□ -0.64
LSAMP-201ENST00000333617 PCDHB15Q9Y5E8 787 aa11.08□□□□□ -0.64
LSAMP-201ENST00000333617 BHMG1C9JSJ3 638 aaPredicted RBP11.07□□□□□ -0.64
LSAMP-201ENST00000333617 ANP32AP39687 249 aaKnown RBP11.07□□□□□ -0.64
LSAMP-201ENST00000333617 MCM10Q7L590 875 aa11.07□□□□□ -0.64
LSAMP-201ENST00000333617 ITPRIPQ8IWB1 547 aa11.07□□□□□ -0.64
LSAMP-201ENST00000333617 MRPL50Q8N5N7 158 aaKnown RBP11.07□□□□□ -0.64
LSAMP-201ENST00000333617 TSPYL6Q8N831 410 aa11.07□□□□□ -0.64
LSAMP-201ENST00000333617 KCNH5Q8NCM2 988 aa11.07□□□□□ -0.64
LSAMP-201ENST00000333617 GAS2L2Q8NHY3 880 aa11.07□□□□□ -0.64
LSAMP-201ENST00000333617 RWDD1Q9H446 243 aaPredicted RBP11.07□□□□□ -0.64
LSAMP-201ENST00000333617 ALS2Q96Q42 1657 aa11.07□□□□□ -0.64
LSAMP-201ENST00000333617 MTHFSDQ2M296 383 aaKnown RBP11.07□□□□□ -0.64
LSAMP-201ENST00000333617 TMEM57Q8N5G2 664 aa11.07□□□□□ -0.64
LSAMP-201ENST00000333617 C8orf58Q8NAV2 365 aa11.07□□□□□ -0.64
LSAMP-201ENST00000333617 RTF1Q92541 710 aaKnown RBP11.07□□□□□ -0.64
LSAMP-201ENST00000333617 ORAI2Q96SN7 254 aa11.07□□□□□ -0.64
LSAMP-201ENST00000333617 NBPF3Q9H094 633 aa11.07□□□□□ -0.64
LSAMP-201ENST00000333617 SLIT3O75094 1523 aa11.07□□□□□ -0.64
LSAMP-201ENST00000333617 CRB1P82279 1406 aa11.06□□□□□ -0.64
LSAMP-201ENST00000333617 ELL2O00472 640 aaPredicted RBP11.06□□□□□ -0.64
LSAMP-201ENST00000333617 CHL1O00533 1208 aa11.06□□□□□ -0.64
LSAMP-201ENST00000333617 COL9A1P20849 921 aa11.06□□□□□ -0.64
LSAMP-201ENST00000333617 RGS3P49796 1198 aa11.06□□□□□ -0.64
LSAMP-201ENST00000333617 HAP1P54257 671 aaPredicted RBP11.06□□□□□ -0.64
LSAMP-201ENST00000333617 C6orf132Q5T0Z8 1188 aa11.06□□□□□ -0.64
LSAMP-201ENST00000333617 IP6K1Q92551 441 aa11.06□□□□□ -0.64
LSAMP-201ENST00000333617 ARHGAP45Q92619 1136 aa11.06□□□□□ -0.64
LSAMP-201ENST00000333617 C19orf44Q9H6X5 657 aa11.06□□□□□ -0.64
LSAMP-201ENST00000333617 C1orf167Q5SNV9 1468 aa11.06□□□□□ -0.64
LSAMP-201ENST00000333617 GOLGA8CPA6NN73 597 aa11.05□□□□□ -0.64
LSAMP-201ENST00000333617 FOXO3O43524 673 aa11.05□□□□□ -0.64
LSAMP-201ENST00000333617 LTV1Q96GA3 475 aaPredicted RBP11.05□□□□□ -0.64
LSAMP-201ENST00000333617 KIAA0232Q92628 1395 aa11.05□□□□□ -0.64
LSAMP-201ENST00000333617 STRCQ7RTU9 1775 aa11.04□□□□□ -0.64
LSAMP-201ENST00000333617 LMO7Q8WWI1 1683 aa11.04□□□□□ -0.64
LSAMP-201ENST00000333617 HTATSF1O43719 755 aaKnown RBP11.04□□□□□ -0.64
LSAMP-201ENST00000333617 NCOA3Q9Y6Q9 1424 aa11.04□□□□□ -0.64
LSAMP-201ENST00000333617 FAM208AQ9UK61 1670 aaKnown RBP11.04□□□□□ -0.64
LSAMP-201ENST00000333617 NBR1Q14596 966 aa11.03□□□□□ -0.64
LSAMP-201ENST00000333617 FAM161AQ3B820 660 aa11.03□□□□□ -0.64
LSAMP-201ENST00000333617 CHMP4BQ9H444 224 aaKnown RBP11.03□□□□□ -0.64
LSAMP-201ENST00000333617 DCCP43146 1447 aa11.03□□□□□ -0.64
LSAMP-201ENST00000333617 CAMTA1Q9Y6Y1 1673 aa11.03□□□□□ -0.64
LSAMP-201ENST00000333617 CRYBG1Q9Y4K1 1723 aa11.03□□□□□ -0.64
LSAMP-201ENST00000333617 TMEM94Q12767 1356 aa11.03□□□□□ -0.64
LSAMP-201ENST00000333617 GNAT3A8MTJ3 354 aa11.03□□□□□ -0.64
LSAMP-201ENST00000333617 ATF3P18847 181 aa11.03□□□□□ -0.64
LSAMP-201ENST00000333617 XPCQ01831 940 aaPredicted RBP11.03□□□□□ -0.64
LSAMP-201ENST00000333617 HDAC1Q13547 482 aaPredicted RBP11.03□□□□□ -0.64
LSAMP-201ENST00000333617 KRT28Q7Z3Y7 464 aa11.03□□□□□ -0.64
LSAMP-201ENST00000333617 API5Q9BZZ5 524 aaKnown RBP11.03□□□□□ -0.64
LSAMP-201ENST00000333617 ZBTB40Q9NUA8 1239 aa11.03□□□□□ -0.64
LSAMP-201ENST00000333617 RABGEF1Q9UJ41 708 aa11.03□□□□□ -0.64
LSAMP-201ENST00000333617 MAP3K5Q99683 1374 aa11.02□□□□□ -0.65
LSAMP-201ENST00000333617 ZBTB7CA1YPR0 619 aa11.02□□□□□ -0.65
LSAMP-201ENST00000333617 PROX2Q3B8N5 592 aa11.02□□□□□ -0.65
LSAMP-201ENST00000333617 MST1RQ04912 1400 aa11.02□□□□□ -0.65
LSAMP-201ENST00000333617 ABCC4O15439 1325 aa11.01□□□□□ -0.65
LSAMP-201ENST00000333617 KDM3BQ7LBC6 1761 aa11.01□□□□□ -0.65
LSAMP-201ENST00000333617 N4BP2Q86UW6 1770 aaPredicted RBP11.01□□□□□ -0.65
LSAMP-201ENST00000333617 GCP02774 474 aa11.01□□□□□ -0.65
LSAMP-201ENST00000333617 LMOD2Q6P5Q4 547 aa11.01□□□□□ -0.65
LSAMP-201ENST00000333617 ERICH6Q7L0X2 663 aa11.01□□□□□ -0.65
LSAMP-201ENST00000333617 NPM2Q86SE8 214 aaKnown RBP11.01□□□□□ -0.65
LSAMP-201ENST00000333617 IPO9Q96P70 1041 aaKnown RBP11.01□□□□□ -0.65
LSAMP-201ENST00000333617 TSPYL4Q9UJ04 414 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms