RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 API5Q9BZZ5 524 aaKnown RBP29.61■■■□□ 2.33
TSEN54-201ENST00000333213 PHAXQ9H814 394 aaKnown RBP29.61■■■□□ 2.33
TSEN54-201ENST00000333213 FLIIQ13045 1269 aa29.6■■■□□ 2.33
TSEN54-201ENST00000333213 SYTL4Q96C24 671 aaPredicted RBP29.6■■■□□ 2.33
TSEN54-201ENST00000333213 CACNA1FO60840 1977 aa29.6■■■□□ 2.33
TSEN54-201ENST00000333213 PTCD1O75127 700 aaKnown RBP29.59■■■□□ 2.33
TSEN54-201ENST00000333213 PROSER3Q2NL68 480 aa29.59■■■□□ 2.33
TSEN54-201ENST00000333213 ACSBG1Q96GR2 724 aa29.59■■■□□ 2.33
TSEN54-201ENST00000333213 CCDC136Q96JN2 1154 aa29.59■■■□□ 2.33
TSEN54-201ENST00000333213 KAT6BQ8WYB5 2073 aa29.58■■■□□ 2.33
TSEN54-201ENST00000333213 PDIA6Q15084 440 aa29.58■■■□□ 2.33
TSEN54-201ENST00000333213 ITPRIPQ8IWB1 547 aa29.58■■■□□ 2.33
TSEN54-201ENST00000333213 DBF4Q9UBU7 674 aaPredicted RBP29.57■■■□□ 2.32
TSEN54-201ENST00000333213 CHMP4AQ9BY43 222 aa29.56■■■□□ 2.32
TSEN54-201ENST00000333213 F6X3S4 739 aa29.55■■■□□ 2.32
TSEN54-201ENST00000333213 KCNQ2O43526 872 aa29.53■■■□□ 2.32
TSEN54-201ENST00000333213 FKBP5Q13451 457 aaPredicted RBP29.53■■■□□ 2.32
TSEN54-201ENST00000333213 FAM182BQ5T319 152 aa29.53■■■□□ 2.32
TSEN54-201ENST00000333213 SEPT12Q8IYM1 358 aa29.53■■■□□ 2.32
TSEN54-201ENST00000333213 DDX19BQ9UMR2 479 aa29.53■■■□□ 2.32
TSEN54-201ENST00000333213 DDX21Q9NR30 783 aaKnown RBP eCLIP29.52■■■□□ 2.32
TSEN54-201ENST00000333213 LAMB4A4D0S4 1761 aa29.52■■■□□ 2.32
TSEN54-201ENST00000333213 INTS3Q68E01 1043 aaKnown RBP29.51■■■□□ 2.32
TSEN54-201ENST00000333213 SLC4A9Q96Q91 983 aa29.51■■■□□ 2.32
TSEN54-201ENST00000333213 EP400Q96L91 3159 aa29.51■■■□□ 2.32
TSEN54-201ENST00000333213 LRP10Q7Z4F1 713 aa29.51■■■□□ 2.31
TSEN54-201ENST00000333213 ZBTB7BO15156 539 aaPredicted RBP29.5■■■□□ 2.31
TSEN54-201ENST00000333213 PIP4K2AP48426 406 aaPredicted RBP29.5■■■□□ 2.31
TSEN54-201ENST00000333213 ZBTB40Q9NUA8 1239 aa29.49■■■□□ 2.31
TSEN54-201ENST00000333213 PCDHB15Q9Y5E8 787 aa29.48■■■□□ 2.31
TSEN54-201ENST00000333213 PTF1AQ7RTS3 328 aa29.47■■■□□ 2.31
TSEN54-201ENST00000333213 HYPKQ9NX55 129 aa29.47■■■□□ 2.31
TSEN54-201ENST00000333213 MYL6BP14649 208 aa29.47■■■□□ 2.31
TSEN54-201ENST00000333213 VSIG10Q8N0Z9 540 aa29.47■■■□□ 2.31
TSEN54-201ENST00000333213 RBM42Q9BTD8 480 aaKnown RBP29.47■■■□□ 2.31
TSEN54-201ENST00000333213 ZNF772Q68DY9 489 aaPredicted RBP29.46■■■□□ 2.31
TSEN54-201ENST00000333213 SLC4A10Q6U841 1118 aa29.46■■■□□ 2.31
TSEN54-201ENST00000333213 NBPF26B4DH59 902 aa29.45■■■□□ 2.31
TSEN54-201ENST00000333213 AAMPQ13685 434 aa29.45■■■□□ 2.31
TSEN54-201ENST00000333213 NBPF14Q5TI25 921 aa29.45■■■□□ 2.31
TSEN54-201ENST00000333213 NBPF10Q6P3W6 841 aaKnown RBP29.45■■■□□ 2.31
TSEN54-201ENST00000333213 NBPF15Q8N660 670 aa29.45■■■□□ 2.31
TSEN54-201ENST00000333213 DNAJC10Q8IXB1 793 aa29.45■■■□□ 2.3
TSEN54-201ENST00000333213 ADCY9O60503 1353 aa29.44■■■□□ 2.3
TSEN54-201ENST00000333213 PI4KAP2A4QPH2 592 aa29.44■■■□□ 2.3
TSEN54-201ENST00000333213 PI4KAP1Q8N8J0 262 aa29.44■■■□□ 2.3
TSEN54-201ENST00000333213 A1BGP04217 495 aa29.43■■■□□ 2.3
TSEN54-201ENST00000333213 AIMP1Q12904 312 aaKnown RBP29.41■■■□□ 2.3
TSEN54-201ENST00000333213 KDM2BQ8NHM5 1336 aa29.41■■■□□ 2.3
TSEN54-201ENST00000333213 IGHDP01880 384 aa29.4■■■□□ 2.3
TSEN54-201ENST00000333213 COPS6Q7L5N1 327 aa29.4■■■□□ 2.3
TSEN54-201ENST00000333213 RGS17Q9UGC6 210 aaPredicted RBP29.4■■■□□ 2.3
TSEN54-201ENST00000333213 ERBB4Q15303 1308 aa29.4■■■□□ 2.3
TSEN54-201ENST00000333213 CCT4P50991 539 aaKnown RBP29.39■■■□□ 2.3
TSEN54-201ENST00000333213 RBM6P78332 1123 aaKnown RBP29.39■■■□□ 2.3
TSEN54-201ENST00000333213 XAGE3Q8WTP9 111 aa29.39■■■□□ 2.3
TSEN54-201ENST00000333213 PXDNLA1KZ92 1463 aa29.39■■■□□ 2.3
TSEN54-201ENST00000333213 BRWD3Q6RI45 1802 aa29.39■■■□□ 2.3
TSEN54-201ENST00000333213 TJP1Q07157 1748 aa29.38■■■□□ 2.29
TSEN54-201ENST00000333213 KSR2Q6VAB6 950 aa29.38■■■□□ 2.29
TSEN54-201ENST00000333213 DNAAF4Q8WXU2 420 aa29.38■■■□□ 2.29
TSEN54-201ENST00000333213 TEX13AQ9BXU3 409 aaPredicted RBP29.38■■■□□ 2.29
TSEN54-201ENST00000333213 PALLDQ8WX93 1383 aa29.38■■■□□ 2.29
TSEN54-201ENST00000333213 MAP3K2Q9Y2U5 619 aa29.37■■■□□ 2.29
TSEN54-201ENST00000333213 N4BP2Q86UW6 1770 aaPredicted RBP29.37■■■□□ 2.29
TSEN54-201ENST00000333213 MEIS3Q99687 375 aa29.37■■■□□ 2.29
TSEN54-201ENST00000333213 C1orf115Q9H7X2 142 aa29.37■■■□□ 2.29
TSEN54-201ENST00000333213 NHSQ6T4R5 1651 aa29.37■■■□□ 2.29
TSEN54-201ENST00000333213 CYP19A1P11511 503 aaPredicted RBP29.36■■■□□ 2.29
TSEN54-201ENST00000333213 LOC102724428A0A0B4J2F2 783 aa29.35■■■□□ 2.29
TSEN54-201ENST00000333213 SIK1P57059 783 aa29.35■■■□□ 2.29
TSEN54-201ENST00000333213 BEND3Q5T5X7 828 aa29.35■■■□□ 2.29
TSEN54-201ENST00000333213 SBF2Q86WG5 1849 aa29.35■■■□□ 2.29
TSEN54-201ENST00000333213 STARD3NLO95772 234 aa29.33■■■□□ 2.29
TSEN54-201ENST00000333213 KRT27Q7Z3Y8 459 aa29.33■■■□□ 2.29
TSEN54-201ENST00000333213 BTAF1O14981 1849 aa29.33■■■□□ 2.29
TSEN54-201ENST00000333213 ITPK1Q13572 414 aa29.32■■■□□ 2.28
TSEN54-201ENST00000333213 CHMP4BQ9H444 224 aaKnown RBP29.32■■■□□ 2.28
TSEN54-201ENST00000333213 ATP10DQ9P241 1426 aa29.32■■■□□ 2.28
TSEN54-201ENST00000333213 DDX58O95786 925 aaKnown RBP29.32■■■□□ 2.28
TSEN54-201ENST00000333213 ATP6V1AP38606 617 aa29.32■■■□□ 2.28
TSEN54-201ENST00000333213 SMARCC1Q92922 1105 aaPredicted RBP29.32■■■□□ 2.28
TSEN54-201ENST00000333213 TTLL7Q6ZT98 887 aa29.31■■■□□ 2.28
TSEN54-201ENST00000333213 ANKRD13DQ6ZTN6 518 aa29.31■■■□□ 2.28
TSEN54-201ENST00000333213 CENPQQ7L2Z9 268 aaPredicted RBP29.3■■■□□ 2.28
TSEN54-201ENST00000333213 SRCIN1Q9C0H9 1055 aa29.3■■■□□ 2.28
TSEN54-201ENST00000333213 RIC3Q7Z5B4 369 aa29.3■■■□□ 2.28
TSEN54-201ENST00000333213 USP44Q9H0E7 712 aa29.3■■■□□ 2.28
TSEN54-201ENST00000333213 CICQ96RK0 1608 aaPredicted RBP29.29■■■□□ 2.28
TSEN54-201ENST00000333213 ZBTB1Q9Y2K1 713 aa29.29■■■□□ 2.28
TSEN54-201ENST00000333213 POTEAQ6S8J7 498 aa29.28■■■□□ 2.28
TSEN54-201ENST00000333213 RXRBP28702 533 aa29.28■■■□□ 2.28
TSEN54-201ENST00000333213 SIRT2Q8IXJ6 389 aa29.28■■■□□ 2.28
TSEN54-201ENST00000333213 CWF19L2Q2TBE0 894 aaKnown RBP29.27■■■□□ 2.28
TSEN54-201ENST00000333213 IGKV5-2P06315 115 aa29.26■■■□□ 2.27
TSEN54-201ENST00000333213 KCNQ4P56696 695 aa29.26■■■□□ 2.27
TSEN54-201ENST00000333213 HDAC1Q13547 482 aaPredicted RBP29.26■■■□□ 2.27
TSEN54-201ENST00000333213 PLBD2Q8NHP8 589 aa29.26■■■□□ 2.27
TSEN54-201ENST00000333213 ARFGEF2Q9Y6D5 1785 aa29.25■■■□□ 2.27
TSEN54-201ENST00000333213 INTS5Q6P9B9 1019 aaKnown RBP29.25■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms