RNA–Protein interactions for RNA: ENST00000332840.9

SYN3-201, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 972 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-201ENST00000332840 MAPK8IP3Q9UPT6 1336 aa12.79□□□□□ -0.36
SYN3-201ENST00000332840 ZNF831Q5JPB2 1677 aa12.79□□□□□ -0.36
SYN3-201ENST00000332840 CEMIPQ8WUJ3 1361 aa12.79□□□□□ -0.36
SYN3-201ENST00000332840 PHF14O94880 888 aa12.78□□□□□ -0.36
SYN3-201ENST00000332840 SLC4A9Q96Q91 983 aa12.78□□□□□ -0.36
SYN3-201ENST00000332840 ADAMTS7Q9UKP4 1686 aa12.77□□□□□ -0.36
SYN3-201ENST00000332840 UBR3Q6ZT12 1888 aa12.77□□□□□ -0.37
SYN3-201ENST00000332840 RPS6KA4O75676 772 aa12.77□□□□□ -0.37
SYN3-201ENST00000332840 TRAPPC3LQ5T215 181 aa12.77□□□□□ -0.37
SYN3-201ENST00000332840 IL17REQ8NFR9 667 aa12.77□□□□□ -0.37
SYN3-201ENST00000332840 ATP10DQ9P241 1426 aa12.77□□□□□ -0.37
SYN3-201ENST00000332840 N4BP2Q86UW6 1770 aaPredicted RBP12.76□□□□□ -0.37
SYN3-201ENST00000332840 ABCB7O75027 752 aa12.76□□□□□ -0.37
SYN3-201ENST00000332840 CRKLP46109 303 aaKnown RBP12.76□□□□□ -0.37
SYN3-201ENST00000332840 TEX13AQ9BXU3 409 aaPredicted RBP12.76□□□□□ -0.37
SYN3-201ENST00000332840 STARD3NLO95772 234 aa12.75□□□□□ -0.37
SYN3-201ENST00000332840 RFC4P35249 363 aa12.75□□□□□ -0.37
SYN3-201ENST00000332840 ZNF790Q6PG37 636 aa12.75□□□□□ -0.37
SYN3-201ENST00000332840 NLGN1Q8N2Q7 840 aa12.75□□□□□ -0.37
SYN3-201ENST00000332840 FMNL2Q96PY5 1086 aa12.75□□□□□ -0.37
SYN3-201ENST00000332840 CCDC87Q9NVE4 849 aa12.75□□□□□ -0.37
SYN3-201ENST00000332840 ADAMTS8Q9UP79 889 aa12.75□□□□□ -0.37
SYN3-201ENST00000332840 CICQ96RK0 1608 aaPredicted RBP12.74□□□□□ -0.37
SYN3-201ENST00000332840 SLC39A6Q13433 755 aa12.74□□□□□ -0.37
SYN3-201ENST00000332840 SCN11AQ9UI33 1791 aa12.74□□□□□ -0.37
SYN3-201ENST00000332840 BTBD11A6QL63 1104 aa12.73□□□□□ -0.37
SYN3-201ENST00000332840 LMOD3Q0VAK6 560 aa12.73□□□□□ -0.37
SYN3-201ENST00000332840 NFE2L2Q16236 605 aa12.73□□□□□ -0.37
SYN3-201ENST00000332840 SMIM5Q71RC9 77 aa12.73□□□□□ -0.37
SYN3-201ENST00000332840 AMIGO3Q86WK7 504 aa12.73□□□□□ -0.37
SYN3-201ENST00000332840 DNAJC10Q8IXB1 793 aa12.73□□□□□ -0.37
SYN3-201ENST00000332840 PLEKHF1Q96S99 279 aa12.73□□□□□ -0.37
SYN3-201ENST00000332840 KCPQ6ZWJ8 1503 aa12.72□□□□□ -0.37
SYN3-201ENST00000332840 HEG1Q9ULI3 1381 aa12.72□□□□□ -0.37
SYN3-201ENST00000332840 CYP19A1P11511 503 aaPredicted RBP12.72□□□□□ -0.37
SYN3-201ENST00000332840 ARHGEF1Q92888 912 aaKnown RBP12.72□□□□□ -0.37
SYN3-201ENST00000332840 ZNF496Q96IT1 587 aaPredicted RBP12.72□□□□□ -0.37
SYN3-201ENST00000332840 CD2APQ9Y5K6 639 aa12.72□□□□□ -0.37
SYN3-201ENST00000332840 GRIN3BO60391 1043 aa12.71□□□□□ -0.37
SYN3-201ENST00000332840 INTS5Q6P9B9 1019 aaKnown RBP12.71□□□□□ -0.37
SYN3-201ENST00000332840 MCM10Q7L590 875 aa12.71□□□□□ -0.37
SYN3-201ENST00000332840 NPM2Q86SE8 214 aaKnown RBP12.71□□□□□ -0.37
SYN3-201ENST00000332840 GPBP1L1Q9HC44 474 aaPredicted RBP12.71□□□□□ -0.37
SYN3-201ENST00000332840 GTF3C3Q9Y5Q9 886 aa12.71□□□□□ -0.37
SYN3-201ENST00000332840 SOS1Q07889 1333 aaPredicted RBP12.7□□□□□ -0.38
SYN3-201ENST00000332840 A0A087WZG4 1122 aa12.7□□□□□ -0.38
SYN3-201ENST00000332840 ZPR1O75312 459 aa12.7□□□□□ -0.38
SYN3-201ENST00000332840 TAF7Q15545 349 aaPredicted RBP12.7□□□□□ -0.38
SYN3-201ENST00000332840 USP42Q9H9J4 1324 aaKnown RBP12.69□□□□□ -0.38
SYN3-201ENST00000332840 MMP10P09238 476 aa12.69□□□□□ -0.38
SYN3-201ENST00000332840 SNRPA1P09661 255 aaKnown RBP12.69□□□□□ -0.38
SYN3-201ENST00000332840 GYS1P13807 737 aa12.69□□□□□ -0.38
SYN3-201ENST00000332840 NGEFQ8N5V2 710 aa12.69□□□□□ -0.38
SYN3-201ENST00000332840 COL15A1P39059 1388 aa12.69□□□□□ -0.38
SYN3-201ENST00000332840 ZBTB1Q9Y2K1 713 aa12.68□□□□□ -0.38
SYN3-201ENST00000332840 PARP3Q9Y6F1 533 aa12.68□□□□□ -0.38
SYN3-201ENST00000332840 COL5A3P25940 1745 aaPredicted RBP12.68□□□□□ -0.38
SYN3-201ENST00000332840 IL6STP40189 918 aaPredicted RBP12.67□□□□□ -0.38
SYN3-201ENST00000332840 RIPK4P57078 832 aa12.67□□□□□ -0.38
SYN3-201ENST00000332840 DCTN1Q14203 1278 aa12.67□□□□□ -0.38
SYN3-201ENST00000332840 RUNDC1Q96C34 613 aa12.67□□□□□ -0.38
SYN3-201ENST00000332840 BABAM1Q9NWV8 329 aa12.67□□□□□ -0.38
SYN3-201ENST00000332840 NARFQ9UHQ1 456 aa12.67□□□□□ -0.38
SYN3-201ENST00000332840 TJP1Q07157 1748 aa12.67□□□□□ -0.38
SYN3-201ENST00000332840 CCDC88AQ3V6T2 1871 aa12.67□□□□□ -0.38
SYN3-201ENST00000332840 KIAA1551Q9HCM1 1747 aa12.66□□□□□ -0.38
SYN3-201ENST00000332840 ZBTB22O15209 634 aa12.66□□□□□ -0.38
SYN3-201ENST00000332840 HSPA6P17066 643 aa12.66□□□□□ -0.38
SYN3-201ENST00000332840 CANXP27824 592 aaKnown RBP12.66□□□□□ -0.38
SYN3-201ENST00000332840 TMPOP42166 694 aaKnown RBP12.66□□□□□ -0.38
SYN3-201ENST00000332840 EIF5P55010 431 aaKnown RBP12.66□□□□□ -0.38
SYN3-201ENST00000332840 BRCA1P38398 1863 aaKnown RBP12.65□□□□□ -0.38
SYN3-201ENST00000332840 WDR90Q96KV7 1748 aa12.65□□□□□ -0.38
SYN3-201ENST00000332840 SALL2Q9Y467 1007 aaPredicted RBP12.65□□□□□ -0.38
SYN3-201ENST00000332840 UBR2Q8IWV8 1755 aa12.65□□□□□ -0.38
SYN3-201ENST00000332840 KIF13BQ9NQT8 1826 aa12.65□□□□□ -0.39
SYN3-201ENST00000332840 TGFB2P61812 414 aa12.64□□□□□ -0.39
SYN3-201ENST00000332840 POLA2Q14181 598 aa12.64□□□□□ -0.39
SYN3-201ENST00000332840 CCDC146Q8IYE0 955 aa12.64□□□□□ -0.39
SYN3-201ENST00000332840 SRP68Q9UHB9 627 aaKnown RBP12.64□□□□□ -0.39
SYN3-201ENST00000332840 ADCY9O60503 1353 aa12.64□□□□□ -0.39
SYN3-201ENST00000332840 C10orf71Q711Q0 1435 aa12.63□□□□□ -0.39
SYN3-201ENST00000332840 APAF1O14727 1248 aa12.63□□□□□ -0.39
SYN3-201ENST00000332840 RGL2O15211 777 aa12.63□□□□□ -0.39
SYN3-201ENST00000332840 KCNQ3O43525 872 aa12.63□□□□□ -0.39
SYN3-201ENST00000332840 FKBP8Q14318 412 aa12.63□□□□□ -0.39
SYN3-201ENST00000332840 USPL1Q5W0Q7 1092 aa12.63□□□□□ -0.39
SYN3-201ENST00000332840 TSPYL4Q9UJ04 414 aa12.63□□□□□ -0.39
SYN3-201ENST00000332840 SBF1O95248 1867 aa12.62□□□□□ -0.39
SYN3-201ENST00000332840 CALD1Q05682 793 aaKnown RBP12.62□□□□□ -0.39
SYN3-201ENST00000332840 ZNF330Q9Y3S2 320 aaPredicted RBP12.62□□□□□ -0.39
SYN3-201ENST00000332840 SIPA1L3O60292 1781 aaPredicted RBP12.61□□□□□ -0.39
SYN3-201ENST00000332840 A1BGP04217 495 aa12.61□□□□□ -0.39
SYN3-201ENST00000332840 NEFLP07196 543 aa12.61□□□□□ -0.39
SYN3-201ENST00000332840 TM4SF1P30408 202 aa12.61□□□□□ -0.39
SYN3-201ENST00000332840 EIF4A1P60842 406 aaKnown RBP12.61□□□□□ -0.39
SYN3-201ENST00000332840 THUMPD2Q9BTF0 503 aaKnown RBP12.61□□□□□ -0.39
SYN3-201ENST00000332840 ZNF652Q9Y2D9 606 aa12.61□□□□□ -0.39
SYN3-201ENST00000332840 USP16Q9Y5T5 823 aa12.61□□□□□ -0.39
SYN3-201ENST00000332840 ERBB4Q15303 1308 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms