RNA–Protein interactions for RNA: ENST00000332682.8

TRIM49B-201, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 1,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-201ENST00000332682 PTPRCP08575 1304 aa15.42■□□□□ 0.06
TRIM49B-201ENST00000332682 TJP1Q07157 1748 aa15.42■□□□□ 0.06
TRIM49B-201ENST00000332682 G2E3Q7L622 706 aa15.42■□□□□ 0.06
TRIM49B-201ENST00000332682 DZIP1LQ8IYY4 767 aaKnown RBP15.42■□□□□ 0.06
TRIM49B-201ENST00000332682 EXOC6Q8TAG9 804 aa15.42■□□□□ 0.06
TRIM49B-201ENST00000332682 DBF4Q9UBU7 674 aaPredicted RBP15.42■□□□□ 0.06
TRIM49B-201ENST00000332682 USP16Q9Y5T5 823 aa15.42■□□□□ 0.06
TRIM49B-201ENST00000332682 CICQ96RK0 1608 aaPredicted RBP15.42■□□□□ 0.06
TRIM49B-201ENST00000332682 ABCC4O15439 1325 aa15.41■□□□□ 0.06
TRIM49B-201ENST00000332682 MS4A1P11836 297 aa15.41■□□□□ 0.06
TRIM49B-201ENST00000332682 RXRBP28702 533 aa15.41■□□□□ 0.06
TRIM49B-201ENST00000332682 KRT27Q7Z3Y8 459 aa15.41■□□□□ 0.06
TRIM49B-201ENST00000332682 FTSJ3Q8IY81 847 aaKnown RBP15.41■□□□□ 0.06
TRIM49B-201ENST00000332682 VSIG10Q8N0Z9 540 aa15.41■□□□□ 0.06
TRIM49B-201ENST00000332682 API5Q9BZZ5 524 aaKnown RBP15.41■□□□□ 0.06
TRIM49B-201ENST00000332682 FLIIQ13045 1269 aa15.4■□□□□ 0.06
TRIM49B-201ENST00000332682 PDIA6Q15084 440 aa15.4■□□□□ 0.06
TRIM49B-201ENST00000332682 PROSER3Q2NL68 480 aa15.4■□□□□ 0.06
TRIM49B-201ENST00000332682 POTEAQ6S8J7 498 aa15.4■□□□□ 0.06
TRIM49B-201ENST00000332682 PTF1AQ7RTS3 328 aa15.4■□□□□ 0.06
TRIM49B-201ENST00000332682 PALLDQ8WX93 1383 aa15.4■□□□□ 0.06
TRIM49B-201ENST00000332682 ZNF831Q5JPB2 1677 aa15.39■□□□□ 0.05
TRIM49B-201ENST00000332682 ANXA1P04083 346 aa15.39■□□□□ 0.05
TRIM49B-201ENST00000332682 SLC4A9Q96Q91 983 aa15.39■□□□□ 0.05
TRIM49B-201ENST00000332682 DDX21Q9NR30 783 aaKnown RBP eCLIP15.39■□□□□ 0.05
TRIM49B-201ENST00000332682 COG6Q9Y2V7 657 aa15.39■□□□□ 0.05
TRIM49B-201ENST00000332682 N4BP2Q86UW6 1770 aaPredicted RBP15.39■□□□□ 0.05
TRIM49B-201ENST00000332682 RBM42Q9BTD8 480 aaKnown RBP15.38■□□□□ 0.05
TRIM49B-201ENST00000332682 PHAXQ9H814 394 aaKnown RBP15.38■□□□□ 0.05
TRIM49B-201ENST00000332682 ERBB4Q15303 1308 aa15.38■□□□□ 0.05
TRIM49B-201ENST00000332682 MVPQ14764 893 aaKnown RBP15.38■□□□□ 0.05
TRIM49B-201ENST00000332682 DNAJC10Q8IXB1 793 aa15.38■□□□□ 0.05
TRIM49B-201ENST00000332682 TMEM57Q8N5G2 664 aa15.38■□□□□ 0.05
TRIM49B-201ENST00000332682 SMARCC1Q92922 1105 aaPredicted RBP15.38■□□□□ 0.05
TRIM49B-201ENST00000332682 FKBP5Q13451 457 aaPredicted RBP15.37■□□□□ 0.05
TRIM49B-201ENST00000332682 FAM196AQ6ZSG2 479 aa15.37■□□□□ 0.05
TRIM49B-201ENST00000332682 LRP10Q7Z4F1 713 aa15.37■□□□□ 0.05
TRIM49B-201ENST00000332682 HYPKQ9NX55 129 aa15.37■□□□□ 0.05
TRIM49B-201ENST00000332682 EP400Q96L91 3159 aa15.36■□□□□ 0.05
TRIM49B-201ENST00000332682 TEX13AQ9BXU3 409 aaPredicted RBP15.36■□□□□ 0.05
TRIM49B-201ENST00000332682 PXDNLA1KZ92 1463 aa15.36■□□□□ 0.05
TRIM49B-201ENST00000332682 LOC102724428A0A0B4J2F2 783 aa15.35■□□□□ 0.05
TRIM49B-201ENST00000332682 NBPF26B4DH59 902 aa15.35■□□□□ 0.05
TRIM49B-201ENST00000332682 LY75O60449 1722 aa15.35■□□□□ 0.05
TRIM49B-201ENST00000332682 COL5A3P25940 1745 aaPredicted RBP15.35■□□□□ 0.05
TRIM49B-201ENST00000332682 SIK1P57059 783 aa15.35■□□□□ 0.05
TRIM49B-201ENST00000332682 NBPF14Q5TI25 921 aa15.35■□□□□ 0.05
TRIM49B-201ENST00000332682 NBPF10Q6P3W6 841 aaKnown RBP15.35■□□□□ 0.05
TRIM49B-201ENST00000332682 ITPRIPQ8IWB1 547 aa15.35■□□□□ 0.05
TRIM49B-201ENST00000332682 NBPF15Q8N660 670 aa15.35■□□□□ 0.05
TRIM49B-201ENST00000332682 PPP4R2Q9NY27 417 aa15.35■□□□□ 0.05
TRIM49B-201ENST00000332682 ADCY9O60503 1353 aa15.34■□□□□ 0.05
TRIM49B-201ENST00000332682 F6X3S4 739 aa15.34■□□□□ 0.05
TRIM49B-201ENST00000332682 MYL6BP14649 208 aa15.34■□□□□ 0.05
TRIM49B-201ENST00000332682 PIP4K2AP48426 406 aaPredicted RBP15.34■□□□□ 0.05
TRIM49B-201ENST00000332682 ILDR1Q86SU0 546 aaPredicted RBP15.34■□□□□ 0.05
TRIM49B-201ENST00000332682 RREB1Q92766 1687 aa15.34■□□□□ 0.05
TRIM49B-201ENST00000332682 STARD3NLO95772 234 aa15.33■□□□□ 0.05
TRIM49B-201ENST00000332682 A1BGP04217 495 aa15.33■□□□□ 0.05
TRIM49B-201ENST00000332682 CYP19A1P11511 503 aaPredicted RBP15.33■□□□□ 0.05
TRIM49B-201ENST00000332682 INTS3Q68E01 1043 aaKnown RBP15.33■□□□□ 0.05
TRIM49B-201ENST00000332682 BCL11BQ9C0K0 894 aaPredicted RBP15.33■□□□□ 0.05
TRIM49B-201ENST00000332682 DDX19BQ9UMR2 479 aa15.33■□□□□ 0.05
TRIM49B-201ENST00000332682 MSH5O43196 834 aa15.33■□□□□ 0.04
TRIM49B-201ENST00000332682 ATP6V1AP38606 617 aa15.32■□□□□ 0.04
TRIM49B-201ENST00000332682 ITPK1Q13572 414 aa15.32■□□□□ 0.04
TRIM49B-201ENST00000332682 XAGE3Q8WTP9 111 aa15.32■□□□□ 0.04
TRIM49B-201ENST00000332682 PI4KAP2A4QPH2 592 aa15.31■□□□□ 0.04
TRIM49B-201ENST00000332682 SLC4A10Q6U841 1118 aa15.31■□□□□ 0.04
TRIM49B-201ENST00000332682 COPS6Q7L5N1 327 aa15.31■□□□□ 0.04
TRIM49B-201ENST00000332682 PI4KAP1Q8N8J0 262 aa15.31■□□□□ 0.04
TRIM49B-201ENST00000332682 ARFGEF2Q9Y6D5 1785 aa15.31■□□□□ 0.04
TRIM49B-201ENST00000332682 MYH14Q7Z406 1995 aaKnown RBP15.31■□□□□ 0.04
TRIM49B-201ENST00000332682 NUP188Q5SRE5 1749 aa15.31■□□□□ 0.04
TRIM49B-201ENST00000332682 DDX58O95786 925 aaKnown RBP15.3■□□□□ 0.04
TRIM49B-201ENST00000332682 CCT4P50991 539 aaKnown RBP15.3■□□□□ 0.04
TRIM49B-201ENST00000332682 AIMP1Q12904 312 aaKnown RBP15.3■□□□□ 0.04
TRIM49B-201ENST00000332682 AAMPQ13685 434 aa15.3■□□□□ 0.04
TRIM49B-201ENST00000332682 KSR2Q6VAB6 950 aa15.3■□□□□ 0.04
TRIM49B-201ENST00000332682 DNAAF4Q8WXU2 420 aa15.3■□□□□ 0.04
TRIM49B-201ENST00000332682 ATP10DQ9P241 1426 aa15.3■□□□□ 0.04
TRIM49B-201ENST00000332682 TAF1LQ8IZX4 1826 aa15.3■□□□□ 0.04
TRIM49B-201ENST00000332682 TRIM37O94972 964 aa15.29■□□□□ 0.04
TRIM49B-201ENST00000332682 B4GALNT3Q6L9W6 998 aa15.29■□□□□ 0.04
TRIM49B-201ENST00000332682 ZBTB1Q9Y2K1 713 aa15.29■□□□□ 0.04
TRIM49B-201ENST00000332682 MAP3K2Q9Y2U5 619 aa15.29■□□□□ 0.04
TRIM49B-201ENST00000332682 ZBTB7BO15156 539 aaPredicted RBP15.28■□□□□ 0.04
TRIM49B-201ENST00000332682 ZBTB40Q9NUA8 1239 aa15.28■□□□□ 0.04
TRIM49B-201ENST00000332682 TNS1Q9HBL0 1735 aaKnown RBP15.28■□□□□ 0.04
TRIM49B-201ENST00000332682 CRKLP46109 303 aaKnown RBP15.27■□□□□ 0.04
TRIM49B-201ENST00000332682 INTS5Q6P9B9 1019 aaKnown RBP15.27■□□□□ 0.04
TRIM49B-201ENST00000332682 CCDC136Q96JN2 1154 aa15.27■□□□□ 0.04
TRIM49B-201ENST00000332682 CCDC87Q9NVE4 849 aa15.27■□□□□ 0.04
TRIM49B-201ENST00000332682 KCNQ4P56696 695 aa15.27■□□□□ 0.03
TRIM49B-201ENST00000332682 BEND3Q5T5X7 828 aa15.27■□□□□ 0.03
TRIM49B-201ENST00000332682 TTLL7Q6ZT98 887 aa15.27■□□□□ 0.03
TRIM49B-201ENST00000332682 ANKRD13DQ6ZTN6 518 aa15.27■□□□□ 0.03
TRIM49B-201ENST00000332682 LINC00116Q8NCU8 138 aa15.27■□□□□ 0.03
TRIM49B-201ENST00000332682 CCNL1Q9UK58 526 aaPredicted RBP15.27■□□□□ 0.03
TRIM49B-201ENST00000332682 IL6STP40189 918 aaPredicted RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms