RNA–Protein interactions for RNA: ENST00000331134.10

NPLOC4-201, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPLOC4, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-201ENST00000331134 TXLNAP40222 546 aa22.09■■□□□ 1.13
NPLOC4-201ENST00000331134 UVSSAQ2YD98 709 aa22.09■■□□□ 1.13
NPLOC4-201ENST00000331134 SCAF11Q99590 1463 aaKnown RBP22.08■■□□□ 1.13
NPLOC4-201ENST00000331134 CCDC69A6NI79 296 aa22.08■■□□□ 1.13
NPLOC4-201ENST00000331134 CCDC181Q5TID7 509 aa22.08■■□□□ 1.13
NPLOC4-201ENST00000331134 JARID2Q92833 1246 aaPredicted RBP22.08■■□□□ 1.13
NPLOC4-201ENST00000331134 DNAJC25Q9H1X3 360 aa22.08■■□□□ 1.13
NPLOC4-201ENST00000331134 SNW1Q13573 536 aaKnown RBP22.08■■□□□ 1.12
NPLOC4-201ENST00000331134 ANKRD44Q8N8A2 993 aa22.08■■□□□ 1.12
NPLOC4-201ENST00000331134 ECHDC1Q9NTX5 307 aa22.08■■□□□ 1.12
NPLOC4-201ENST00000331134 SKILP12757 684 aa22.07■■□□□ 1.12
NPLOC4-201ENST00000331134 PTGS1P23219 599 aa22.07■■□□□ 1.12
NPLOC4-201ENST00000331134 CCDC57Q2TAC2 916 aa22.07■■□□□ 1.12
NPLOC4-201ENST00000331134 DNAAF4Q8WXU2 420 aa22.07■■□□□ 1.12
NPLOC4-201ENST00000331134 KIAA0754O94854 1291 aa22.07■■□□□ 1.12
NPLOC4-201ENST00000331134 CT47A1Q5JQC4 288 aaPredicted RBP22.07■■□□□ 1.12
NPLOC4-201ENST00000331134 PI4KAP2A4QPH2 592 aa22.06■■□□□ 1.12
NPLOC4-201ENST00000331134 CPA1P15085 419 aa22.06■■□□□ 1.12
NPLOC4-201ENST00000331134 IDI1Q13907 227 aa22.06■■□□□ 1.12
NPLOC4-201ENST00000331134 PLEKHM2Q8IWE5 1019 aa22.06■■□□□ 1.12
NPLOC4-201ENST00000331134 PI4KAP1Q8N8J0 262 aa22.06■■□□□ 1.12
NPLOC4-201ENST00000331134 DACH1Q9UI36 760 aa22.06■■□□□ 1.12
NPLOC4-201ENST00000331134 RPGRIP1LQ68CZ1 1315 aa22.06■■□□□ 1.12
NPLOC4-201ENST00000331134 SLC3A2P08195 630 aaKnown RBP22.05■■□□□ 1.12
NPLOC4-201ENST00000331134 CCAR1Q8IX12 1150 aaKnown RBP22.05■■□□□ 1.12
NPLOC4-201ENST00000331134 CALCOCO1Q9P1Z2 691 aa22.05■■□□□ 1.12
NPLOC4-201ENST00000331134 MAGI1Q96QZ7 1491 aaPredicted RBP22.05■■□□□ 1.12
NPLOC4-201ENST00000331134 MPRIPQ6WCQ1 1025 aa22.05■■□□□ 1.12
NPLOC4-201ENST00000331134 FAM200AQ8TCP9 573 aa22.05■■□□□ 1.12
NPLOC4-201ENST00000331134 DHX8Q14562 1220 aaKnown RBP22.05■■□□□ 1.12
NPLOC4-201ENST00000331134 TAF3Q5VWG9 929 aa22.05■■□□□ 1.12
NPLOC4-201ENST00000331134 RNF216Q9NWF9 866 aaPredicted RBP22.05■■□□□ 1.12
NPLOC4-201ENST00000331134 MRPL50Q8N5N7 158 aaKnown RBP22.05■■□□□ 1.12
NPLOC4-201ENST00000331134 TANGO6Q9C0B7 1094 aa22.05■■□□□ 1.12
NPLOC4-201ENST00000331134 U3KPZ7 1027 aaPredicted RBP22.05■■□□□ 1.12
NPLOC4-201ENST00000331134 HAND2P61296 217 aa22.04■■□□□ 1.12
NPLOC4-201ENST00000331134 ZFYVE27Q5T4F4 411 aa22.04■■□□□ 1.12
NPLOC4-201ENST00000331134 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.04■■□□□ 1.121e-8■■■■□ 21.1
NPLOC4-201ENST00000331134 ZHX3Q9H4I2 956 aa22.04■■□□□ 1.12
NPLOC4-201ENST00000331134 SNAPC4Q5SXM2 1469 aa22.04■■□□□ 1.12
NPLOC4-201ENST00000331134 DNA2P51530 1060 aa22.04■■□□□ 1.12
NPLOC4-201ENST00000331134 RHPN1Q8TCX5 695 aa22.04■■□□□ 1.12
NPLOC4-201ENST00000331134 PLCD4Q9BRC7 762 aa22.04■■□□□ 1.12
NPLOC4-201ENST00000331134 ZSCAN12O43309 604 aa22.04■■□□□ 1.12
NPLOC4-201ENST00000331134 JAKMIP3Q5VZ66 844 aa22.04■■□□□ 1.12
NPLOC4-201ENST00000331134 BRF1Q92994 677 aa22.04■■□□□ 1.12
NPLOC4-201ENST00000331134 CTNNA3Q9UI47 895 aa22.04■■□□□ 1.12
NPLOC4-201ENST00000331134 RALGAPBQ86X10 1494 aa22.03■■□□□ 1.12
NPLOC4-201ENST00000331134 LMAN1P49257 510 aa22.03■■□□□ 1.12
NPLOC4-201ENST00000331134 CHAMP1Q96JM3 812 aa22.03■■□□□ 1.12
NPLOC4-201ENST00000331134 CRACR2AQ9BSW2 395 aa22.03■■□□□ 1.12
NPLOC4-201ENST00000331134 VAMP4O75379 141 aa22.03■■□□□ 1.12
NPLOC4-201ENST00000331134 ZC3H6P61129 1189 aaKnown RBP22.03■■□□□ 1.12
NPLOC4-201ENST00000331134 SNRKQ9NRH2 765 aa22.03■■□□□ 1.12
NPLOC4-201ENST00000331134 PDIA4P13667 645 aaKnown RBP22.03■■□□□ 1.12
NPLOC4-201ENST00000331134 EIF5P55010 431 aaKnown RBP22.03■■□□□ 1.12
NPLOC4-201ENST00000331134 GNG11P61952 73 aa22.03■■□□□ 1.12
NPLOC4-201ENST00000331134 PHACTR3Q96KR7 559 aa22.03■■□□□ 1.12
NPLOC4-201ENST00000331134 ABCA10Q8WWZ4 1543 aa22.02■■□□□ 1.12
NPLOC4-201ENST00000331134 IMMTQ16891 758 aaKnown RBP22.02■■□□□ 1.12
NPLOC4-201ENST00000331134 OSCARQ8IYS5 282 aa22.02■■□□□ 1.12
NPLOC4-201ENST00000331134 CASQ1P31415 396 aa22.02■■□□□ 1.12
NPLOC4-201ENST00000331134 KIAA1328Q86T90 577 aa22.02■■□□□ 1.12
NPLOC4-201ENST00000331134 LUZP1Q86V48 1076 aa22.02■■□□□ 1.12
NPLOC4-201ENST00000331134 KRT222Q8N1A0 295 aa22.02■■□□□ 1.12
NPLOC4-201ENST00000331134 ARHGAP45Q92619 1136 aa22.02■■□□□ 1.12
NPLOC4-201ENST00000331134 USP26Q9BXU7 913 aa22.02■■□□□ 1.12
NPLOC4-201ENST00000331134 DNAI1Q9UI46 699 aa22.02■■□□□ 1.12
NPLOC4-201ENST00000331134 PTPRCP08575 1304 aa22.02■■□□□ 1.12
NPLOC4-201ENST00000331134 TDO2P48775 406 aa22.02■■□□□ 1.12
NPLOC4-201ENST00000331134 GAS2L3Q86XJ1 694 aa22.02■■□□□ 1.12
NPLOC4-201ENST00000331134 RAI14Q9P0K7 980 aa22.02■■□□□ 1.12
NPLOC4-201ENST00000331134 FBXO3Q9UK99 471 aa22.02■■□□□ 1.12
NPLOC4-201ENST00000331134 NOS1P29475 1434 aa22.01■■□□□ 1.11
NPLOC4-201ENST00000331134 PIP4K2AP48426 406 aaPredicted RBP22.01■■□□□ 1.11
NPLOC4-201ENST00000331134 STX1AQ16623 288 aa22.01■■□□□ 1.11
NPLOC4-201ENST00000331134 CDK5RAP3Q96JB5 506 aa22.01■■□□□ 1.11
NPLOC4-201ENST00000331134 MYD88Q99836 296 aa22.01■■□□□ 1.11
NPLOC4-201ENST00000331134 IL16Q14005 1332 aa22.01■■□□□ 1.11
NPLOC4-201ENST00000331134 CABP4P57796 275 aa22.01■■□□□ 1.11
NPLOC4-201ENST00000331134 FAM173BQ6P4H8 233 aa22.01■■□□□ 1.11
NPLOC4-201ENST00000331134 DCTPP1Q9H773 170 aa22.01■■□□□ 1.11
NPLOC4-201ENST00000331134 NOL7Q9UMY1 257 aaKnown RBP22.01■■□□□ 1.11
NPLOC4-201ENST00000331134 PTCD1O75127 700 aaKnown RBP22.01■■□□□ 1.11
NPLOC4-201ENST00000331134 F13A1P00488 732 aa22.01■■□□□ 1.11
NPLOC4-201ENST00000331134 TATP17735 454 aaPredicted RBP22.01■■□□□ 1.11
NPLOC4-201ENST00000331134 CCDC144CPQ8IYA2 1237 aa22.01■■□□□ 1.11
NPLOC4-201ENST00000331134 FBXO31Q5XUX0 539 aaPredicted RBP22■■□□□ 1.11
NPLOC4-201ENST00000331134 HSP90AB2PQ58FF8 381 aa22■■□□□ 1.11
NPLOC4-201ENST00000331134 CDKL5O76039 1030 aa22■■□□□ 1.11
NPLOC4-201ENST00000331134 CCDC191Q8NCU4 936 aa22■■□□□ 1.11
NPLOC4-201ENST00000331134 CCDC94Q9BW85 323 aaPredicted RBP22■■□□□ 1.11
NPLOC4-201ENST00000331134 ZRANB1Q9UGI0 708 aa22■■□□□ 1.11
NPLOC4-201ENST00000331134 KIAA0586Q9BVV6 1533 aa22■■□□□ 1.11
NPLOC4-201ENST00000331134 SSBP05455 408 aaKnown RBP eCLIP22■■□□□ 1.11
NPLOC4-201ENST00000331134 ODF2Q5BJF6 829 aa22■■□□□ 1.11
NPLOC4-201ENST00000331134 CTAGE5O15320 804 aa21.99■■□□□ 1.11
NPLOC4-201ENST00000331134 KIF5CO60282 957 aa21.99■■□□□ 1.11
NPLOC4-201ENST00000331134 CNNM3Q8NE01 707 aa21.99■■□□□ 1.11
NPLOC4-201ENST00000331134 BMS1Q14692 1282 aaKnown RBP21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 238.7 ms