RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 C5P01031 1676 aa25.37■■□□□ 1.65
RIPPLY3-201ENST00000329553 SNRPA1P09661 255 aaKnown RBP25.37■■□□□ 1.65
RIPPLY3-201ENST00000329553 DNAAF4Q8WXU2 420 aa25.36■■□□□ 1.65
RIPPLY3-201ENST00000329553 HYPKQ9NX55 129 aa25.36■■□□□ 1.65
RIPPLY3-201ENST00000329553 DISP2A7MBM2 1401 aa25.36■■□□□ 1.65
RIPPLY3-201ENST00000329553 RTL5Q5HYW3 569 aaPredicted RBP25.36■■□□□ 1.65
RIPPLY3-201ENST00000329553 ANKRD45Q5TZF3 282 aa25.36■■□□□ 1.65
RIPPLY3-201ENST00000329553 CHD1LQ86WJ1 897 aa25.36■■□□□ 1.65
RIPPLY3-201ENST00000329553 LNPKQ9C0E8 428 aa25.36■■□□□ 1.65
RIPPLY3-201ENST00000329553 USP16Q9Y5T5 823 aa25.36■■□□□ 1.65
RIPPLY3-201ENST00000329553 ADCY9O60503 1353 aa25.36■■□□□ 1.65
RIPPLY3-201ENST00000329553 N4BP2Q86UW6 1770 aaPredicted RBP25.35■■□□□ 1.65
RIPPLY3-201ENST00000329553 GNAI3P08754 354 aa25.35■■□□□ 1.65
RIPPLY3-201ENST00000329553 USP44Q9H0E7 712 aa25.35■■□□□ 1.65
RIPPLY3-201ENST00000329553 DCTPP1Q9H773 170 aa25.35■■□□□ 1.65
RIPPLY3-201ENST00000329553 GNAI2P04899 355 aa25.35■■□□□ 1.65
RIPPLY3-201ENST00000329553 SRCIN1Q9C0H9 1055 aa25.35■■□□□ 1.65
RIPPLY3-201ENST00000329553 BEND3Q5T5X7 828 aa25.33■■□□□ 1.65
RIPPLY3-201ENST00000329553 PLCH1Q4KWH8 1693 aa25.33■■□□□ 1.65
RIPPLY3-201ENST00000329553 KSR2Q6VAB6 950 aa25.32■■□□□ 1.64
RIPPLY3-201ENST00000329553 MAP3K2Q9Y2U5 619 aa25.31■■□□□ 1.64
RIPPLY3-201ENST00000329553 MYL6BP14649 208 aa25.3■■□□□ 1.64
RIPPLY3-201ENST00000329553 AIMP1Q12904 312 aaKnown RBP25.29■■□□□ 1.64
RIPPLY3-201ENST00000329553 TOGARAM1Q9Y4F4 1720 aa25.29■■□□□ 1.64
RIPPLY3-201ENST00000329553 EXOC5O00471 708 aa25.28■■□□□ 1.64
RIPPLY3-201ENST00000329553 GLI3P10071 1580 aa25.28■■□□□ 1.64
RIPPLY3-201ENST00000329553 SPATA31A1Q5TZJ5 1347 aa25.28■■□□□ 1.64
RIPPLY3-201ENST00000329553 UBTFL1P0CB47 393 aaPredicted RBP25.28■■□□□ 1.64
RIPPLY3-201ENST00000329553 LRRFIP2Q9Y608 721 aaKnown RBP25.28■■□□□ 1.64
RIPPLY3-201ENST00000329553 NRAPQ86VF7 1730 aa25.27■■□□□ 1.64
RIPPLY3-201ENST00000329553 LRP10Q7Z4F1 713 aa25.27■■□□□ 1.64
RIPPLY3-201ENST00000329553 TMOD3Q9NYL9 352 aa25.27■■□□□ 1.64
RIPPLY3-201ENST00000329553 HMMRO75330 724 aa25.27■■□□□ 1.64
RIPPLY3-201ENST00000329553 DDX58O95786 925 aaKnown RBP25.27■■□□□ 1.64
RIPPLY3-201ENST00000329553 PIP4K2AP48426 406 aaPredicted RBP25.27■■□□□ 1.64
RIPPLY3-201ENST00000329553 UBR2Q8IWV8 1755 aa25.26■■□□□ 1.63
RIPPLY3-201ENST00000329553 PTCD1O75127 700 aaKnown RBP25.25■■□□□ 1.63
RIPPLY3-201ENST00000329553 ATP8B2P98198 1209 aa25.25■■□□□ 1.63
RIPPLY3-201ENST00000329553 COPS6Q7L5N1 327 aa25.25■■□□□ 1.63
RIPPLY3-201ENST00000329553 XAGE3Q8WTP9 111 aa25.25■■□□□ 1.63
RIPPLY3-201ENST00000329553 KCPQ6ZWJ8 1503 aa25.25■■□□□ 1.63
RIPPLY3-201ENST00000329553 NBPF7P0C2Y1 421 aaPredicted RBP25.25■■□□□ 1.63
RIPPLY3-201ENST00000329553 AEBP2Q6ZN18 517 aaPredicted RBP25.25■■□□□ 1.63
RIPPLY3-201ENST00000329553 PAPPAQ13219 1627 aa25.25■■□□□ 1.63
RIPPLY3-201ENST00000329553 PIGBQ92521 554 aa25.24■■□□□ 1.63
RIPPLY3-201ENST00000329553 PNMA6EA0A0J9YXQ4 647 aa25.24■■□□□ 1.63
RIPPLY3-201ENST00000329553 THRAP3Q9Y2W1 955 aaKnown RBP25.24■■□□□ 1.63
RIPPLY3-201ENST00000329553 SLIT2O94813 1529 aa25.23■■□□□ 1.63
RIPPLY3-201ENST00000329553 ALDH1L1O75891 902 aa25.23■■□□□ 1.63
RIPPLY3-201ENST00000329553 TNS2Q63HR2 1409 aa25.23■■□□□ 1.63
RIPPLY3-201ENST00000329553 WNK3Q9BYP7 1800 aa25.23■■□□□ 1.63
RIPPLY3-201ENST00000329553 RIC3Q7Z5B4 369 aa25.22■■□□□ 1.63
RIPPLY3-201ENST00000329553 CDCA7Q9BWT1 371 aaPredicted RBP25.22■■□□□ 1.63
RIPPLY3-201ENST00000329553 SPATA31A5Q5VU36 1347 aa25.22■■□□□ 1.63
RIPPLY3-201ENST00000329553 SPATA31A7Q8IWB4 1347 aa25.22■■□□□ 1.63
RIPPLY3-201ENST00000329553 CWF19L2Q2TBE0 894 aaKnown RBP25.21■■□□□ 1.63
RIPPLY3-201ENST00000329553 ASAP1Q9ULH1 1129 aa25.21■■□□□ 1.63
RIPPLY3-201ENST00000329553 LAMB4A4D0S4 1761 aa25.21■■□□□ 1.63
RIPPLY3-201ENST00000329553 LINS1Q8NG48 757 aa25.21■■□□□ 1.63
RIPPLY3-201ENST00000329553 JCADQ9P266 1359 aa25.21■■□□□ 1.63
RIPPLY3-201ENST00000329553 CERKQ8TCT0 537 aa25.2■■□□□ 1.62
RIPPLY3-201ENST00000329553 NWD2Q9ULI1 1742 aa25.2■■□□□ 1.62
RIPPLY3-201ENST00000329553 NBPF26B4DH59 902 aa25.2■■□□□ 1.62
RIPPLY3-201ENST00000329553 APBB1O00213 710 aa25.2■■□□□ 1.62
RIPPLY3-201ENST00000329553 SEC24BO95487 1268 aa25.2■■□□□ 1.62
RIPPLY3-201ENST00000329553 NBPF14Q5TI25 921 aa25.2■■□□□ 1.62
RIPPLY3-201ENST00000329553 NBPF10Q6P3W6 841 aaKnown RBP25.2■■□□□ 1.62
RIPPLY3-201ENST00000329553 ANKRD13DQ6ZTN6 518 aa25.2■■□□□ 1.62
RIPPLY3-201ENST00000329553 NBPF15Q8N660 670 aa25.2■■□□□ 1.62
RIPPLY3-201ENST00000329553 ITGB4P16144 1822 aa25.19■■□□□ 1.62
RIPPLY3-201ENST00000329553 CCDC9Q9Y3X0 531 aaKnown RBP25.19■■□□□ 1.62
RIPPLY3-201ENST00000329553 C16orf71Q8IYS4 520 aaPredicted RBP25.18■■□□□ 1.62
RIPPLY3-201ENST00000329553 ATG3Q9NT62 314 aa25.18■■□□□ 1.62
RIPPLY3-201ENST00000329553 SMARCA5O60264 1052 aaPredicted RBP25.18■■□□□ 1.62
RIPPLY3-201ENST00000329553 C9orf78Q9NZ63 289 aaPredicted RBP25.18■■□□□ 1.62
RIPPLY3-201ENST00000329553 KAT6BQ8WYB5 2073 aa25.18■■□□□ 1.62
RIPPLY3-201ENST00000329553 ERBB4Q15303 1308 aa25.18■■□□□ 1.62
RIPPLY3-201ENST00000329553 A1BGP04217 495 aa25.17■■□□□ 1.62
RIPPLY3-201ENST00000329553 IGKV5-2P06315 115 aa25.17■■□□□ 1.62
RIPPLY3-201ENST00000329553 DDB1Q16531 1140 aa25.17■■□□□ 1.62
RIPPLY3-201ENST00000329553 METTL22Q9BUU2 404 aaPredicted RBP25.17■■□□□ 1.62
RIPPLY3-201ENST00000329553 EXOC6BQ9Y2D4 811 aa25.17■■□□□ 1.62
RIPPLY3-201ENST00000329553 PPP1R42Q7Z4L9 355 aa25.16■■□□□ 1.62
RIPPLY3-201ENST00000329553 UNC5CLQ8IV45 518 aa25.16■■□□□ 1.62
RIPPLY3-201ENST00000329553 SSH3Q8TE77 659 aa25.16■■□□□ 1.62
RIPPLY3-201ENST00000329553 C8orf37Q96NL8 207 aa25.16■■□□□ 1.62
RIPPLY3-201ENST00000329553 PLEKHM2Q8IWE5 1019 aa25.16■■□□□ 1.62
RIPPLY3-201ENST00000329553 NGLY1Q96IV0 654 aa25.16■■□□□ 1.62
RIPPLY3-201ENST00000329553 BARGINQ6ZT62 677 aa25.15■■□□□ 1.62
RIPPLY3-201ENST00000329553 BCL9O00512 1426 aa25.15■■□□□ 1.62
RIPPLY3-201ENST00000329553 LRP6O75581 1613 aa25.15■■□□□ 1.62
RIPPLY3-201ENST00000329553 MYD88Q99836 296 aa25.14■■□□□ 1.62
RIPPLY3-201ENST00000329553 NEXNQ0ZGT2 675 aa25.14■■□□□ 1.61
RIPPLY3-201ENST00000329553 GRM8O00222 908 aa25.13■■□□□ 1.61
RIPPLY3-201ENST00000329553 POLA2Q14181 598 aa25.13■■□□□ 1.61
RIPPLY3-201ENST00000329553 BMP2KLQ5H9B9 411 aa25.13■■□□□ 1.61
RIPPLY3-201ENST00000329553 SYTL4Q96C24 671 aaPredicted RBP25.13■■□□□ 1.61
RIPPLY3-201ENST00000329553 NEURL1BA8MQ27 555 aa25.13■■□□□ 1.61
RIPPLY3-201ENST00000329553 PRIM1P49642 420 aaKnown RBP25.13■■□□□ 1.61
RIPPLY3-201ENST00000329553 OTUD7AQ8TE49 926 aaPredicted RBP25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms