RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 LRRFIP2Q9Y608 721 aaKnown RBP13.47□□□□□ -0.25
COL4A5-201ENST00000328300 SAMD9LQ8IVG5 1584 aa13.47□□□□□ -0.25
COL4A5-201ENST00000328300 EXOC6BQ9Y2D4 811 aa13.47□□□□□ -0.25
COL4A5-201ENST00000328300 PPP4R3BQ5MIZ7 849 aa13.47□□□□□ -0.25
COL4A5-201ENST00000328300 TXLNBQ8N3L3 684 aa13.47□□□□□ -0.25
COL4A5-201ENST00000328300 STIM1Q13586 685 aa13.46□□□□□ -0.25
COL4A5-201ENST00000328300 CWC27Q6UX04 472 aaKnown RBP13.46□□□□□ -0.25
COL4A5-201ENST00000328300 PHAXQ9H814 394 aaKnown RBP13.46□□□□□ -0.25
COL4A5-201ENST00000328300 HMG20BQ9P0W2 317 aa13.46□□□□□ -0.25
COL4A5-201ENST00000328300 TSPY26PQ9H489 355 aa13.46□□□□□ -0.25
COL4A5-201ENST00000328300 LARP1BQ659C4 914 aaKnown RBP13.46□□□□□ -0.25
COL4A5-201ENST00000328300 R3HCC1Q9Y3T6 440 aaKnown RBP13.46□□□□□ -0.25
COL4A5-201ENST00000328300 IDH1O75874 414 aaKnown RBP13.46□□□□□ -0.25
COL4A5-201ENST00000328300 HSP90AB2PQ58FF8 381 aa13.46□□□□□ -0.25
COL4A5-201ENST00000328300 ANKRD13DQ6ZTN6 518 aa13.46□□□□□ -0.25
COL4A5-201ENST00000328300 CCAR1Q8IX12 1150 aaKnown RBP13.46□□□□□ -0.26
COL4A5-201ENST00000328300 ZFYP08048 801 aaPredicted RBP13.45□□□□□ -0.26
COL4A5-201ENST00000328300 KSR2Q6VAB6 950 aa13.45□□□□□ -0.26
COL4A5-201ENST00000328300 HECW2Q9P2P5 1572 aa13.45□□□□□ -0.26
COL4A5-201ENST00000328300 HMGN5P82970 282 aaKnown RBP13.45□□□□□ -0.26
COL4A5-201ENST00000328300 CCDC152Q4G0S7 254 aa13.45□□□□□ -0.26
COL4A5-201ENST00000328300 CCDC178Q5BJE1 867 aa13.45□□□□□ -0.26
COL4A5-201ENST00000328300 SMARCE1Q969G3 411 aa13.45□□□□□ -0.26
COL4A5-201ENST00000328300 TRAK2O60296 914 aa13.45□□□□□ -0.26
COL4A5-201ENST00000328300 EPS15P42566 896 aa13.45□□□□□ -0.26
COL4A5-201ENST00000328300 NUTM1Q86Y26 1132 aa13.45□□□□□ -0.26
COL4A5-201ENST00000328300 MAGEC2Q9UBF1 373 aaPredicted RBP13.45□□□□□ -0.26
COL4A5-201ENST00000328300 SHROOM2Q13796 1616 aa13.45□□□□□ -0.26
COL4A5-201ENST00000328300 PLEKHG3A1L390 1219 aa13.45□□□□□ -0.26
COL4A5-201ENST00000328300 NLRP1Q9C000 1473 aa13.45□□□□□ -0.26
COL4A5-201ENST00000328300 GSTO1P78417 241 aa13.45□□□□□ -0.26
COL4A5-201ENST00000328300 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.44□□□□□ -0.26
COL4A5-201ENST00000328300 ZCCHC11Q5TAX3 1644 aaKnown RBP13.44□□□□□ -0.26
COL4A5-201ENST00000328300 ST5P78524 1137 aa13.44□□□□□ -0.26
COL4A5-201ENST00000328300 CCDC192P0DO97 292 aa13.44□□□□□ -0.26
COL4A5-201ENST00000328300 BICDL1Q6ZP65 573 aa13.44□□□□□ -0.26
COL4A5-201ENST00000328300 NYXQ9GZU5 481 aa13.44□□□□□ -0.26
COL4A5-201ENST00000328300 HOXC9P31274 260 aa13.44□□□□□ -0.26
COL4A5-201ENST00000328300 DDX46Q7L014 1031 aaKnown RBP13.44□□□□□ -0.26
COL4A5-201ENST00000328300 PLEKHG1Q9ULL1 1385 aa13.44□□□□□ -0.26
COL4A5-201ENST00000328300 CHD1O14646 1710 aa13.44□□□□□ -0.26
COL4A5-201ENST00000328300 EFCAB6Q5THR3 1501 aa13.44□□□□□ -0.26
COL4A5-201ENST00000328300 GCP02774 474 aa13.44□□□□□ -0.26
COL4A5-201ENST00000328300 RBM5P52756 815 aaKnown RBP eCLIP13.43□□□□□ -0.26
COL4A5-201ENST00000328300 ZGPATQ8N5A5 531 aaKnown RBP13.43□□□□□ -0.26
COL4A5-201ENST00000328300 MRPL50Q8N5N7 158 aaKnown RBP13.43□□□□□ -0.26
COL4A5-201ENST00000328300 NAPBQ9H115 298 aa13.43□□□□□ -0.26
COL4A5-201ENST00000328300 DDB1Q16531 1140 aa13.43□□□□□ -0.26
COL4A5-201ENST00000328300 WWC2Q6AWC2 1192 aa13.43□□□□□ -0.26
COL4A5-201ENST00000328300 DZIP1Q86YF9 867 aaKnown RBP13.43□□□□□ -0.26
COL4A5-201ENST00000328300 UBAP1LF5GYI3 381 aa13.43□□□□□ -0.26
COL4A5-201ENST00000328300 BMP2KQ9NSY1 1161 aaPredicted RBP13.42□□□□□ -0.26
COL4A5-201ENST00000328300 ADCY10Q96PN6 1610 aa13.42□□□□□ -0.26
COL4A5-201ENST00000328300 CBFA2T2O43439 604 aa13.42□□□□□ -0.26
COL4A5-201ENST00000328300 NCKAP5LQ9HCH0 1330 aa13.42□□□□□ -0.26
COL4A5-201ENST00000328300 PI4KAP2A4QPH2 592 aa13.42□□□□□ -0.26
COL4A5-201ENST00000328300 USP5P45974 858 aa13.42□□□□□ -0.26
COL4A5-201ENST00000328300 PI4KAP1Q8N8J0 262 aa13.42□□□□□ -0.26
COL4A5-201ENST00000328300 ANKIB1Q9P2G1 1089 aa13.42□□□□□ -0.26
COL4A5-201ENST00000328300 NASPP49321 788 aaPredicted RBP13.42□□□□□ -0.26
COL4A5-201ENST00000328300 FOSBP53539 338 aa13.42□□□□□ -0.26
COL4A5-201ENST00000328300 LINS1Q8NG48 757 aa13.42□□□□□ -0.26
COL4A5-201ENST00000328300 ZNF771Q7L3S4 317 aaPredicted RBP13.41□□□□□ -0.26
COL4A5-201ENST00000328300 ANKRD44Q8N8A2 993 aa13.41□□□□□ -0.26
COL4A5-201ENST00000328300 BAG3O95817 575 aa13.41□□□□□ -0.26
COL4A5-201ENST00000328300 IQCA1Q86XH1 822 aa13.41□□□□□ -0.26
COL4A5-201ENST00000328300 KDM5AP29375 1690 aaKnown RBP13.41□□□□□ -0.26
COL4A5-201ENST00000328300 IL15P40933 162 aaPredicted RBP13.41□□□□□ -0.26
COL4A5-201ENST00000328300 RTL1A6NKG5 1358 aa13.41□□□□□ -0.26
COL4A5-201ENST00000328300 F6X3S4 739 aa13.41□□□□□ -0.26
COL4A5-201ENST00000328300 KRT18P05783 430 aaKnown RBP13.41□□□□□ -0.26
COL4A5-201ENST00000328300 NUP133Q8WUM0 1156 aa13.41□□□□□ -0.26
COL4A5-201ENST00000328300 LUC7LQ9NQ29 371 aaKnown RBP13.41□□□□□ -0.26
COL4A5-201ENST00000328300 CASTP20810 708 aaKnown RBP13.41□□□□□ -0.26
COL4A5-201ENST00000328300 ATP8B2P98198 1209 aa13.4□□□□□ -0.26
COL4A5-201ENST00000328300 HOMER1Q86YM7 354 aa13.4□□□□□ -0.26
COL4A5-201ENST00000328300 PER1O15534 1290 aaPredicted RBP13.4□□□□□ -0.26
COL4A5-201ENST00000328300 PRPF40AO75400 957 aaKnown RBP13.4□□□□□ -0.26
COL4A5-201ENST00000328300 MAP4K4O95819 1239 aaPredicted RBP13.4□□□□□ -0.26
COL4A5-201ENST00000328300 RFC4P35249 363 aa13.4□□□□□ -0.26
COL4A5-201ENST00000328300 SETQ01105 290 aaPredicted RBP13.4□□□□□ -0.26
COL4A5-201ENST00000328300 MTHFSDQ2M296 383 aaKnown RBP13.4□□□□□ -0.26
COL4A5-201ENST00000328300 RDXP35241 583 aaKnown RBP13.4□□□□□ -0.26
COL4A5-201ENST00000328300 TRAF1Q13077 416 aa13.4□□□□□ -0.26
COL4A5-201ENST00000328300 CHRNA2Q15822 529 aa13.4□□□□□ -0.26
COL4A5-201ENST00000328300 TTC22Q5TAA0 569 aa13.4□□□□□ -0.26
COL4A5-201ENST00000328300 SPATA32Q96LK8 384 aa13.4□□□□□ -0.26
COL4A5-201ENST00000328300 ABCF2Q9UG63 623 aa13.4□□□□□ -0.26
COL4A5-201ENST00000328300 TTC41PQ6P2S7 1318 aa13.4□□□□□ -0.26
COL4A5-201ENST00000328300 CCDC173Q0VFZ6 552 aa13.4□□□□□ -0.26
COL4A5-201ENST00000328300 LDHAL6AQ6ZMR3 332 aa13.4□□□□□ -0.26
COL4A5-201ENST00000328300 CTCFLQ8NI51 663 aaPredicted RBP13.4□□□□□ -0.26
COL4A5-201ENST00000328300 SCAND2PQ9GZW5 306 aaPredicted RBP13.4□□□□□ -0.26
COL4A5-201ENST00000328300 ZBTB3Q9H5J0 574 aa13.4□□□□□ -0.26
COL4A5-201ENST00000328300 EHMT1Q9H9B1 1298 aa13.4□□□□□ -0.26
COL4A5-201ENST00000328300 SEC63Q9UGP8 760 aaKnown RBP13.4□□□□□ -0.26
COL4A5-201ENST00000328300 POLR3DP05423 398 aaPredicted RBP13.39□□□□□ -0.27
COL4A5-201ENST00000328300 ZSCAN29Q8IWY8 852 aaPredicted RBP13.39□□□□□ -0.27
COL4A5-201ENST00000328300 ACBD3Q9H3P7 528 aa13.39□□□□□ -0.27
COL4A5-201ENST00000328300 ZNF213O14771 459 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms