RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 STK31Q9BXU1 1019 aa19.55■□□□□ 0.72
PRPF3-201ENST00000324862 MYL6BP14649 208 aa19.55■□□□□ 0.72
PRPF3-201ENST00000324862 A1BGP04217 495 aa19.54■□□□□ 0.72
PRPF3-201ENST00000324862 ZKSCAN2Q63HK3 967 aa19.54■□□□□ 0.72
PRPF3-201ENST00000324862 FAM196AQ6ZSG2 479 aa19.54■□□□□ 0.72
PRPF3-201ENST00000324862 ATF7IPQ6VMQ6 1270 aa19.53■□□□□ 0.72
PRPF3-201ENST00000324862 CRBNQ96SW2 442 aa19.53■□□□□ 0.72
PRPF3-201ENST00000324862 KIF16BQ96L93 1317 aa19.53■□□□□ 0.72
PRPF3-201ENST00000324862 LOC102724428A0A0B4J2F2 783 aa19.53■□□□□ 0.72
PRPF3-201ENST00000324862 F6X3S4 739 aa19.53■□□□□ 0.72
PRPF3-201ENST00000324862 BRPF1P55201 1214 aaPredicted RBP19.53■□□□□ 0.72
PRPF3-201ENST00000324862 SIK1P57059 783 aa19.53■□□□□ 0.72
PRPF3-201ENST00000324862 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.53■□□□□ 0.72
PRPF3-201ENST00000324862 EXOC6Q8TAG9 804 aa19.53■□□□□ 0.72
PRPF3-201ENST00000324862 NBPF26B4DH59 902 aa19.52■□□□□ 0.72
PRPF3-201ENST00000324862 ITPK1Q13572 414 aa19.52■□□□□ 0.72
PRPF3-201ENST00000324862 NBPF14Q5TI25 921 aa19.52■□□□□ 0.72
PRPF3-201ENST00000324862 NBPF10Q6P3W6 841 aaKnown RBP19.52■□□□□ 0.72
PRPF3-201ENST00000324862 NBPF15Q8N660 670 aa19.52■□□□□ 0.72
PRPF3-201ENST00000324862 COG6Q9Y2V7 657 aa19.52■□□□□ 0.72
PRPF3-201ENST00000324862 SOS1Q07889 1333 aaPredicted RBP19.52■□□□□ 0.72
PRPF3-201ENST00000324862 ATP6V1AP38606 617 aa19.52■□□□□ 0.71
PRPF3-201ENST00000324862 FLIIQ13045 1269 aa19.52■□□□□ 0.71
PRPF3-201ENST00000324862 DBF4Q9UBU7 674 aaPredicted RBP19.51■□□□□ 0.71
PRPF3-201ENST00000324862 NHSQ6T4R5 1651 aa19.51■□□□□ 0.71
PRPF3-201ENST00000324862 AIMP1Q12904 312 aaKnown RBP19.51■□□□□ 0.71
PRPF3-201ENST00000324862 BCL11BQ9C0K0 894 aaPredicted RBP19.5■□□□□ 0.71
PRPF3-201ENST00000324862 SBF2Q86WG5 1849 aa19.5■□□□□ 0.71
PRPF3-201ENST00000324862 FKBP5Q13451 457 aaPredicted RBP19.5■□□□□ 0.71
PRPF3-201ENST00000324862 BTAF1O14981 1849 aa19.49■□□□□ 0.71
PRPF3-201ENST00000324862 LRP10Q7Z4F1 713 aa19.49■□□□□ 0.71
PRPF3-201ENST00000324862 DZIP1LQ8IYY4 767 aaKnown RBP19.49■□□□□ 0.71
PRPF3-201ENST00000324862 VSIG10Q8N0Z9 540 aa19.49■□□□□ 0.71
PRPF3-201ENST00000324862 FTSJ3Q8IY81 847 aaKnown RBP19.49■□□□□ 0.71
PRPF3-201ENST00000324862 TMEM57Q8N5G2 664 aa19.49■□□□□ 0.71
PRPF3-201ENST00000324862 DDX21Q9NR30 783 aaKnown RBP eCLIP19.49■□□□□ 0.71
PRPF3-201ENST00000324862 ZNF330Q9Y3S2 320 aaPredicted RBP19.49■□□□□ 0.71
PRPF3-201ENST00000324862 CYP19A1P11511 503 aaPredicted RBP19.48■□□□□ 0.71
PRPF3-201ENST00000324862 IPO8O15397 1037 aaKnown RBP19.47■□□□□ 0.71
PRPF3-201ENST00000324862 SMARCC1Q92922 1105 aaPredicted RBP19.47■□□□□ 0.71
PRPF3-201ENST00000324862 PDE3AQ14432 1141 aa19.46■□□□□ 0.71
PRPF3-201ENST00000324862 SMIM5Q71RC9 77 aa19.46■□□□□ 0.71
PRPF3-201ENST00000324862 ZBTB1Q9Y2K1 713 aa19.46■□□□□ 0.71
PRPF3-201ENST00000324862 SLC4A10Q6U841 1118 aa19.46■□□□□ 0.71
PRPF3-201ENST00000324862 COPS6Q7L5N1 327 aa19.46■□□□□ 0.71
PRPF3-201ENST00000324862 XAGE3Q8WTP9 111 aa19.46■□□□□ 0.71
PRPF3-201ENST00000324862 LINC00116Q8NCU8 138 aa19.45■□□□□ 0.7
PRPF3-201ENST00000324862 ARHGAP45Q92619 1136 aa19.45■□□□□ 0.7
PRPF3-201ENST00000324862 TJP1Q07157 1748 aa19.45■□□□□ 0.7
PRPF3-201ENST00000324862 PI4KAP2A4QPH2 592 aa19.44■□□□□ 0.7
PRPF3-201ENST00000324862 STARD3NLO95772 234 aa19.44■□□□□ 0.7
PRPF3-201ENST00000324862 ITPRIPQ8IWB1 547 aa19.44■□□□□ 0.7
PRPF3-201ENST00000324862 PI4KAP1Q8N8J0 262 aa19.44■□□□□ 0.7
PRPF3-201ENST00000324862 PTPRCP08575 1304 aa19.44■□□□□ 0.7
PRPF3-201ENST00000324862 ABCC4O15439 1325 aa19.44■□□□□ 0.7
PRPF3-201ENST00000324862 TTLL7Q6ZT98 887 aa19.44■□□□□ 0.7
PRPF3-201ENST00000324862 LRRC4BQ9NT99 713 aa19.44■□□□□ 0.7
PRPF3-201ENST00000324862 HYPKQ9NX55 129 aa19.44■□□□□ 0.7
PRPF3-201ENST00000324862 CCNL1Q9UK58 526 aaPredicted RBP19.44■□□□□ 0.7
PRPF3-201ENST00000324862 LAMB4A4D0S4 1761 aa19.43■□□□□ 0.7
PRPF3-201ENST00000324862 API5Q9BZZ5 524 aaKnown RBP19.43■□□□□ 0.7
PRPF3-201ENST00000324862 ADCY9O60503 1353 aa19.43■□□□□ 0.7
PRPF3-201ENST00000324862 CRKLP46109 303 aaKnown RBP19.43■□□□□ 0.7
PRPF3-201ENST00000324862 INTS5Q6P9B9 1019 aaKnown RBP19.43■□□□□ 0.7
PRPF3-201ENST00000324862 TEX13AQ9BXU3 409 aaPredicted RBP19.43■□□□□ 0.7
PRPF3-201ENST00000324862 APBA3O96018 575 aa19.42■□□□□ 0.7
PRPF3-201ENST00000324862 MVPQ14764 893 aaKnown RBP19.42■□□□□ 0.7
PRPF3-201ENST00000324862 PROM2Q8N271 834 aa19.41■□□□□ 0.7
PRPF3-201ENST00000324862 ARXQ96QS3 562 aa19.41■□□□□ 0.7
PRPF3-201ENST00000324862 MAP3K2Q9Y2U5 619 aa19.41■□□□□ 0.7
PRPF3-201ENST00000324862 CHMP4AQ9BY43 222 aa19.41■□□□□ 0.7
PRPF3-201ENST00000324862 AMIGO3Q86WK7 504 aa19.4■□□□□ 0.7
PRPF3-201ENST00000324862 ZBTB3Q9H5J0 574 aa19.39■□□□□ 0.69
PRPF3-201ENST00000324862 CCDC87Q9NVE4 849 aa19.39■□□□□ 0.69
PRPF3-201ENST00000324862 ERBB4Q15303 1308 aa19.38■□□□□ 0.69
PRPF3-201ENST00000324862 KSR2Q6VAB6 950 aa19.37■□□□□ 0.69
PRPF3-201ENST00000324862 ANKRD13DQ6ZTN6 518 aa19.37■□□□□ 0.69
PRPF3-201ENST00000324862 RIC3Q7Z5B4 369 aa19.37■□□□□ 0.69
PRPF3-201ENST00000324862 DNAAF4Q8WXU2 420 aa19.37■□□□□ 0.69
PRPF3-201ENST00000324862 B4GALNT3Q6L9W6 998 aa19.37■□□□□ 0.69
PRPF3-201ENST00000324862 TBC1D2BQ9UPU7 963 aa19.37■□□□□ 0.69
PRPF3-201ENST00000324862 MYH14Q7Z406 1995 aaKnown RBP19.37■□□□□ 0.69
PRPF3-201ENST00000324862 TXNRD1Q16881 649 aa19.36■□□□□ 0.69
PRPF3-201ENST00000324862 MS4A1P11836 297 aa19.36■□□□□ 0.69
PRPF3-201ENST00000324862 CWF19L2Q2TBE0 894 aaKnown RBP19.36■□□□□ 0.69
PRPF3-201ENST00000324862 INTS3Q68E01 1043 aaKnown RBP19.36■□□□□ 0.69
PRPF3-201ENST00000324862 C1orf115Q9H7X2 142 aa19.36■□□□□ 0.69
PRPF3-201ENST00000324862 LY75O60449 1722 aa19.35■□□□□ 0.69
PRPF3-201ENST00000324862 ZBTB7BO15156 539 aaPredicted RBP19.35■□□□□ 0.69
PRPF3-201ENST00000324862 BEND3Q5T5X7 828 aa19.35■□□□□ 0.69
PRPF3-201ENST00000324862 ATP5J2-PTCD1G3V325 749 aa19.34■□□□□ 0.69
PRPF3-201ENST00000324862 EIF5P55010 431 aaKnown RBP19.34■□□□□ 0.69
PRPF3-201ENST00000324862 MEIS3Q99687 375 aa19.34■□□□□ 0.69
PRPF3-201ENST00000324862 DDX58O95786 925 aaKnown RBP19.34■□□□□ 0.69
PRPF3-201ENST00000324862 IL6STP40189 918 aaPredicted RBP19.34■□□□□ 0.69
PRPF3-201ENST00000324862 MYD88Q99836 296 aa19.34■□□□□ 0.69
PRPF3-201ENST00000324862 DDX19BQ9UMR2 479 aa19.34■□□□□ 0.69
PRPF3-201ENST00000324862 CACNA1FO60840 1977 aa19.33■□□□□ 0.69
PRPF3-201ENST00000324862 GNPATO15228 680 aa19.33■□□□□ 0.69
PRPF3-201ENST00000324862 EN1Q05925 392 aaPredicted RBP19.33■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms