RNA–Protein interactions for RNA: ENST00000324727.8

SCN4B-201, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4B, Length 4,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-201ENST00000324727 ANKIB1Q9P2G1 1089 aa13.73□□□□□ -0.21
SCN4B-201ENST00000324727 LRPPRCP42704 1394 aaKnown RBP13.73□□□□□ -0.21
SCN4B-201ENST00000324727 DDB1Q16531 1140 aa13.73□□□□□ -0.21
SCN4B-201ENST00000324727 PSMA5P28066 241 aa13.73□□□□□ -0.21
SCN4B-201ENST00000324727 ERCC4Q92889 916 aaPredicted RBP13.73□□□□□ -0.21
SCN4B-201ENST00000324727 KIF1BPQ96EK5 621 aa13.73□□□□□ -0.21
SCN4B-201ENST00000324727 USP8P40818 1118 aa13.72□□□□□ -0.21
SCN4B-201ENST00000324727 TDO2P48775 406 aa13.72□□□□□ -0.21
SCN4B-201ENST00000324727 LDHAL6AQ6ZMR3 332 aa13.72□□□□□ -0.21
SCN4B-201ENST00000324727 ANKRD13DQ6ZTN6 518 aa13.72□□□□□ -0.21
SCN4B-201ENST00000324727 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.72□□□□□ -0.21
SCN4B-201ENST00000324727 SLC4A8Q2Y0W8 1093 aa13.72□□□□□ -0.21
SCN4B-201ENST00000324727 PPP1R42Q7Z4L9 355 aa13.72□□□□□ -0.21
SCN4B-201ENST00000324727 CCDC82Q8N4S0 544 aa13.72□□□□□ -0.21
SCN4B-201ENST00000324727 MAGI3Q5TCQ9 1506 aa13.72□□□□□ -0.21
SCN4B-201ENST00000324727 IGHDP01880 384 aa13.72□□□□□ -0.21
SCN4B-201ENST00000324727 JAKMIP1Q96N16 626 aaKnown RBP13.72□□□□□ -0.21
SCN4B-201ENST00000324727 SDF4Q9BRK5 362 aa13.72□□□□□ -0.21
SCN4B-201ENST00000324727 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.72□□□□□ -0.21
SCN4B-201ENST00000324727 IPO7O95373 1038 aaKnown RBP13.72□□□□□ -0.21
SCN4B-201ENST00000324727 SNRPA1P09661 255 aaKnown RBP13.72□□□□□ -0.21
SCN4B-201ENST00000324727 MX1P20591 662 aa13.72□□□□□ -0.21
SCN4B-201ENST00000324727 SART3Q15020 963 aaKnown RBP13.72□□□□□ -0.21
SCN4B-201ENST00000324727 ALDH1L2Q3SY69 923 aa13.72□□□□□ -0.21
SCN4B-201ENST00000324727 NAT10Q9H0A0 1025 aaKnown RBP13.72□□□□□ -0.21
SCN4B-201ENST00000324727 MINDY4BA8MYZ0 360 aa13.71□□□□□ -0.21
SCN4B-201ENST00000324727 CCDC94Q9BW85 323 aaPredicted RBP13.71□□□□□ -0.21
SCN4B-201ENST00000324727 HYPKQ9NX55 129 aa13.71□□□□□ -0.21
SCN4B-201ENST00000324727 PZPP20742 1482 aa13.71□□□□□ -0.21
SCN4B-201ENST00000324727 SSFA2P28290 1259 aa13.71□□□□□ -0.21
SCN4B-201ENST00000324727 C6orf229H3BNL8 230 aa13.71□□□□□ -0.22
SCN4B-201ENST00000324727 UHRF1BP1Q6BDS2 1440 aa13.71□□□□□ -0.22
SCN4B-201ENST00000324727 ZNF652Q9Y2D9 606 aa13.71□□□□□ -0.22
SCN4B-201ENST00000324727 TTC21AQ8NDW8 1320 aa13.71□□□□□ -0.22
SCN4B-201ENST00000324727 YTHDC2Q9H6S0 1430 aaKnown RBP13.7□□□□□ -0.22
SCN4B-201ENST00000324727 LMTK3Q96Q04 1460 aa13.7□□□□□ -0.22
SCN4B-201ENST00000324727 IGSF3O75054 1194 aa13.7□□□□□ -0.22
SCN4B-201ENST00000324727 IFIT1P09914 478 aaKnown RBP13.7□□□□□ -0.22
SCN4B-201ENST00000324727 GTF2F1P35269 517 aaKnown RBP eCLIP13.7□□□□□ -0.22
SCN4B-201ENST00000324727 ATP6V1AP38606 617 aa13.7□□□□□ -0.22
SCN4B-201ENST00000324727 UBXN4Q92575 508 aa13.7□□□□□ -0.22
SCN4B-201ENST00000324727 DDX11Q96FC9 970 aa13.7□□□□□ -0.22
SCN4B-201ENST00000324727 CYP46A1Q9Y6A2 500 aa13.7□□□□□ -0.22
SCN4B-201ENST00000324727 ABCC11Q96J66 1382 aa13.7□□□□□ -0.22
SCN4B-201ENST00000324727 PCDHB15Q9Y5E8 787 aa13.7□□□□□ -0.22
SCN4B-201ENST00000324727 WDR33Q9C0J8 1336 aaKnown RBP13.7□□□□□ -0.22
SCN4B-201ENST00000324727 NKTRP30414 1462 aaKnown RBP13.69□□□□□ -0.22
SCN4B-201ENST00000324727 IRX3P78415 501 aaPredicted RBP13.69□□□□□ -0.22
SCN4B-201ENST00000324727 BLOC1S2Q6QNY1 142 aa13.69□□□□□ -0.22
SCN4B-201ENST00000324727 TMCO3Q6UWJ1 677 aa13.69□□□□□ -0.22
SCN4B-201ENST00000324727 USP25Q9UHP3 1055 aa13.69□□□□□ -0.22
SCN4B-201ENST00000324727 KLHL40Q2TBA0 621 aa13.69□□□□□ -0.22
SCN4B-201ENST00000324727 CWF19L2Q2TBE0 894 aaKnown RBP13.69□□□□□ -0.22
SCN4B-201ENST00000324727 AXDND1Q5T1B0 1012 aaPredicted RBP13.69□□□□□ -0.22
SCN4B-201ENST00000324727 NACAP1Q9BZK3 213 aa13.69□□□□□ -0.22
SCN4B-201ENST00000324727 CCP110O43303 1012 aa13.68□□□□□ -0.22
SCN4B-201ENST00000324727 FERMT3Q86UX7 667 aa13.68□□□□□ -0.22
SCN4B-201ENST00000324727 TCOF1Q13428 1488 aaKnown RBP13.68□□□□□ -0.22
SCN4B-201ENST00000324727 SMC2O95347 1197 aa13.68□□□□□ -0.22
SCN4B-201ENST00000324727 PDIA4P13667 645 aaKnown RBP13.68□□□□□ -0.22
SCN4B-201ENST00000324727 HOXC9P31274 260 aa13.68□□□□□ -0.22
SCN4B-201ENST00000324727 FILIP1Q7Z7B0 1213 aa13.68□□□□□ -0.22
SCN4B-201ENST00000324727 AIDAQ96BJ3 306 aa13.68□□□□□ -0.22
SCN4B-201ENST00000324727 ZKSCAN5Q9Y2L8 839 aa13.68□□□□□ -0.22
SCN4B-201ENST00000324727 RLBP1P12271 317 aa13.68□□□□□ -0.22
SCN4B-201ENST00000324727 PRPF40BQ6NWY9 871 aaKnown RBP13.68□□□□□ -0.22
SCN4B-201ENST00000324727 GPATCH11Q8N954 259 aa13.68□□□□□ -0.22
SCN4B-201ENST00000324727 RALGAPBQ86X10 1494 aa13.68□□□□□ -0.22
SCN4B-201ENST00000324727 NPATQ14207 1427 aa13.68□□□□□ -0.22
SCN4B-201ENST00000324727 HIP1O00291 1037 aa13.68□□□□□ -0.22
SCN4B-201ENST00000324727 PDILTQ8N807 584 aa13.68□□□□□ -0.22
SCN4B-201ENST00000324727 TBC1D32Q96NH3 1257 aa13.68□□□□□ -0.22
SCN4B-201ENST00000324727 PA2G4Q9UQ80 394 aaKnown RBP13.68□□□□□ -0.22
SCN4B-201ENST00000324727 SPATA31E1Q6ZUB1 1445 aa13.67□□□□□ -0.22
SCN4B-201ENST00000324727 KIF20AO95235 890 aa13.67□□□□□ -0.22
SCN4B-201ENST00000324727 IL2RBP14784 551 aa13.67□□□□□ -0.22
SCN4B-201ENST00000324727 RFC4P35249 363 aa13.67□□□□□ -0.22
SCN4B-201ENST00000324727 PHAXQ9H814 394 aaKnown RBP13.67□□□□□ -0.22
SCN4B-201ENST00000324727 KDM6BO15054 1643 aa13.67□□□□□ -0.22
SCN4B-201ENST00000324727 LGR6Q9HBX8 967 aa13.67□□□□□ -0.22
SCN4B-201ENST00000324727 GLRX3O76003 335 aaKnown RBP13.67□□□□□ -0.22
SCN4B-201ENST00000324727 PLEKHH1Q9ULM0 1364 aa13.67□□□□□ -0.22
SCN4B-201ENST00000324727 EIF3JO75822 258 aaKnown RBP13.66□□□□□ -0.22
SCN4B-201ENST00000324727 PTPN14Q15678 1187 aa13.66□□□□□ -0.22
SCN4B-201ENST00000324727 CCDC191Q8NCU4 936 aa13.66□□□□□ -0.22
SCN4B-201ENST00000324727 HELBQ8NG08 1087 aaPredicted RBP13.66□□□□□ -0.22
SCN4B-201ENST00000324727 ZNF622Q969S3 477 aaKnown RBP eCLIP13.66□□□□□ -0.22
SCN4B-201ENST00000324727 PCMTD1Q96MG8 357 aaPredicted RBP13.66□□□□□ -0.22
SCN4B-201ENST00000324727 NSD2O96028 1365 aa13.66□□□□□ -0.22
SCN4B-201ENST00000324727 ATP10AO60312 1499 aa13.66□□□□□ -0.22
SCN4B-201ENST00000324727 GOLIM4O00461 696 aa13.66□□□□□ -0.22
SCN4B-201ENST00000324727 POLR3GO15318 223 aaPredicted RBP13.66□□□□□ -0.22
SCN4B-201ENST00000324727 LMBR1LQ6UX01 489 aa13.66□□□□□ -0.22
SCN4B-201ENST00000324727 CCDC43Q96MW1 224 aaKnown RBP13.66□□□□□ -0.22
SCN4B-201ENST00000324727 SLAIN2Q9P270 581 aa13.66□□□□□ -0.22
SCN4B-201ENST00000324727 KINO60870 393 aaKnown RBP13.66□□□□□ -0.22
SCN4B-201ENST00000324727 TNNT1P13805 278 aa13.66□□□□□ -0.22
SCN4B-201ENST00000324727 CWC25Q9NXE8 425 aaPredicted RBP13.66□□□□□ -0.22
SCN4B-201ENST00000324727 C8orf34Q49A92 452 aa13.66□□□□□ -0.22
SCN4B-201ENST00000324727 C16orf71Q8IYS4 520 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms