RNA–Protein interactions for RNA: ENST00000324616.9

C12orf40-201, Transcript of chromosome 12 open reading frame 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C12orf40, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf40-201ENST00000324616 USP26Q9BXU7 913 aa13.25□□□□□ -0.29
C12orf40-201ENST00000324616 CHMP4AQ9BY43 222 aa13.25□□□□□ -0.29
C12orf40-201ENST00000324616 GSE1Q14687 1217 aa13.24□□□□□ -0.29
C12orf40-201ENST00000324616 PHKG2P15735 406 aa13.24□□□□□ -0.29
C12orf40-201ENST00000324616 MX1P20591 662 aa13.24□□□□□ -0.29
C12orf40-201ENST00000324616 DDIT3P35638 169 aa13.24□□□□□ -0.29
C12orf40-201ENST00000324616 SLC39A6Q13433 755 aa13.24□□□□□ -0.29
C12orf40-201ENST00000324616 POLA2Q14181 598 aa13.24□□□□□ -0.29
C12orf40-201ENST00000324616 TATP17735 454 aaPredicted RBP13.23□□□□□ -0.29
C12orf40-201ENST00000324616 CSB-PGBD3P0DP91 1061 aa13.23□□□□□ -0.29
C12orf40-201ENST00000324616 SLC52A2Q9HAB3 445 aa13.23□□□□□ -0.29
C12orf40-201ENST00000324616 CHMP5Q9NZZ3 219 aa13.23□□□□□ -0.29
C12orf40-201ENST00000324616 MAP3K2Q9Y2U5 619 aa13.23□□□□□ -0.29
C12orf40-201ENST00000324616 ZNF790Q6PG37 636 aa13.22□□□□□ -0.29
C12orf40-201ENST00000324616 BRINP3Q76B58 766 aa13.22□□□□□ -0.29
C12orf40-201ENST00000324616 IL1RAPL2Q9NP60 686 aa13.22□□□□□ -0.29
C12orf40-201ENST00000324616 SRGAP3O43295 1099 aa13.22□□□□□ -0.29
C12orf40-201ENST00000324616 NFATC2IPQ8NCF5 419 aa13.22□□□□□ -0.29
C12orf40-201ENST00000324616 CPDO75976 1380 aa13.22□□□□□ -0.29
C12orf40-201ENST00000324616 PDIA6Q15084 440 aa13.21□□□□□ -0.29
C12orf40-201ENST00000324616 CASC1Q6TDU7 716 aa13.21□□□□□ -0.29
C12orf40-201ENST00000324616 SPG7Q9UQ90 795 aa13.21□□□□□ -0.29
C12orf40-201ENST00000324616 MRC1P22897 1456 aa13.21□□□□□ -0.29
C12orf40-201ENST00000324616 ABCA3Q99758 1704 aa13.21□□□□□ -0.29
C12orf40-201ENST00000324616 CYP27B1O15528 508 aa13.21□□□□□ -0.29
C12orf40-201ENST00000324616 SURF6O75683 361 aaKnown RBP13.21□□□□□ -0.29
C12orf40-201ENST00000324616 HSP90AB1P08238 724 aaKnown RBP13.21□□□□□ -0.29
C12orf40-201ENST00000324616 KSR2Q6VAB6 950 aa13.21□□□□□ -0.29
C12orf40-201ENST00000324616 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.21□□□□□ -0.29
C12orf40-201ENST00000324616 STAP2Q9UGK3 403 aa13.21□□□□□ -0.29
C12orf40-201ENST00000324616 K7ELQ4 463 aaPredicted RBP13.2□□□□□ -0.3
C12orf40-201ENST00000324616 EIF5BO60841 1220 aaKnown RBP13.2□□□□□ -0.3
C12orf40-201ENST00000324616 CWF19L2Q2TBE0 894 aaKnown RBP13.2□□□□□ -0.3
C12orf40-201ENST00000324616 IFNL2Q8IZJ0 200 aa13.2□□□□□ -0.3
C12orf40-201ENST00000324616 HYPKQ9NX55 129 aa13.2□□□□□ -0.3
C12orf40-201ENST00000324616 PARP4Q9UKK3 1724 aaKnown RBP13.2□□□□□ -0.3
C12orf40-201ENST00000324616 DDX21Q9NR30 783 aaKnown RBP eCLIP13.2□□□□□ -0.3
C12orf40-201ENST00000324616 GLI3P10071 1580 aa13.19□□□□□ -0.3
C12orf40-201ENST00000324616 ERC2O15083 957 aa13.19□□□□□ -0.3
C12orf40-201ENST00000324616 NUTM1Q86Y26 1132 aa13.19□□□□□ -0.3
C12orf40-201ENST00000324616 UNC5CLQ8IV45 518 aa13.19□□□□□ -0.3
C12orf40-201ENST00000324616 RHPN1Q8TCX5 695 aa13.19□□□□□ -0.3
C12orf40-201ENST00000324616 ALDH1L1O75891 902 aa13.19□□□□□ -0.3
C12orf40-201ENST00000324616 AFDNP55196 1824 aaKnown RBP13.18□□□□□ -0.3
C12orf40-201ENST00000324616 RAB11FIP3O75154 756 aa13.18□□□□□ -0.3
C12orf40-201ENST00000324616 REC8O95072 547 aa13.18□□□□□ -0.3
C12orf40-201ENST00000324616 AIMP1Q12904 312 aaKnown RBP13.18□□□□□ -0.3
C12orf40-201ENST00000324616 RABEP1Q15276 862 aa13.18□□□□□ -0.3
C12orf40-201ENST00000324616 ZNF496Q96IT1 587 aaPredicted RBP13.18□□□□□ -0.3
C12orf40-201ENST00000324616 LAMB4A4D0S4 1761 aa13.18□□□□□ -0.3
C12orf40-201ENST00000324616 PLEKHG2Q9H7P9 1386 aa13.18□□□□□ -0.3
C12orf40-201ENST00000324616 MTX1Q13505 466 aa13.18□□□□□ -0.3
C12orf40-201ENST00000324616 FOXD4L1Q9NU39 408 aa13.18□□□□□ -0.3
C12orf40-201ENST00000324616 ZNF335Q9H4Z2 1342 aaPredicted RBP13.18□□□□□ -0.3
C12orf40-201ENST00000324616 MCM4P33991 863 aa13.17□□□□□ -0.3
C12orf40-201ENST00000324616 RILPL2Q969X0 211 aa13.17□□□□□ -0.3
C12orf40-201ENST00000324616 DCAF5Q96JK2 942 aa13.17□□□□□ -0.3
C12orf40-201ENST00000324616 C9orf78Q9NZ63 289 aaPredicted RBP13.17□□□□□ -0.3
C12orf40-201ENST00000324616 SHANK3Q9BYB0 1731 aa13.17□□□□□ -0.3
C12orf40-201ENST00000324616 ARFGEF2Q9Y6D5 1785 aa13.17□□□□□ -0.3
C12orf40-201ENST00000324616 TRIM6-TRIM34B2RNG4 842 aa13.17□□□□□ -0.3
C12orf40-201ENST00000324616 ESYT1Q9BSJ8 1104 aa13.17□□□□□ -0.3
C12orf40-201ENST00000324616 AOX1Q06278 1338 aa13.17□□□□□ -0.3
C12orf40-201ENST00000324616 MYL6BP14649 208 aa13.16□□□□□ -0.3
C12orf40-201ENST00000324616 CHMLP26374 656 aa13.16□□□□□ -0.3
C12orf40-201ENST00000324616 LINS1Q8NG48 757 aa13.16□□□□□ -0.3
C12orf40-201ENST00000324616 KIF1BPQ96EK5 621 aa13.16□□□□□ -0.3
C12orf40-201ENST00000324616 PI4K2BQ8TCG2 481 aa13.16□□□□□ -0.3
C12orf40-201ENST00000324616 KAZALD1Q96I82 304 aa13.16□□□□□ -0.3
C12orf40-201ENST00000324616 SOS2Q07890 1332 aaPredicted RBP13.16□□□□□ -0.3
C12orf40-201ENST00000324616 KDM4FA0A1W2PPD8 638 aa13.15□□□□□ -0.3
C12orf40-201ENST00000324616 IGKV5-2P06315 115 aa13.15□□□□□ -0.3
C12orf40-201ENST00000324616 SLAIN2Q9P270 581 aa13.15□□□□□ -0.3
C12orf40-201ENST00000324616 USP16Q9Y5T5 823 aa13.15□□□□□ -0.3
C12orf40-201ENST00000324616 GRM8O00222 908 aa13.15□□□□□ -0.3
C12orf40-201ENST00000324616 DDX58O95786 925 aaKnown RBP13.15□□□□□ -0.3
C12orf40-201ENST00000324616 HSP90AA1P07900 732 aaKnown RBP13.15□□□□□ -0.3
C12orf40-201ENST00000324616 LRP10Q7Z4F1 713 aa13.15□□□□□ -0.3
C12orf40-201ENST00000324616 UTYO14607 1347 aa13.15□□□□□ -0.3
C12orf40-201ENST00000324616 UBR2Q8IWV8 1755 aa13.15□□□□□ -0.3
C12orf40-201ENST00000324616 COL5A2P05997 1499 aaPredicted RBP13.15□□□□□ -0.3
C12orf40-201ENST00000324616 PIP4K2AP48426 406 aaPredicted RBP13.15□□□□□ -0.31
C12orf40-201ENST00000324616 SUCLG2Q96I99 432 aa13.15□□□□□ -0.31
C12orf40-201ENST00000324616 IL25Q9H293 177 aa13.15□□□□□ -0.31
C12orf40-201ENST00000324616 PRDM11Q9NQV5 511 aa13.15□□□□□ -0.31
C12orf40-201ENST00000324616 CIZ1Q9ULV3 898 aaPredicted RBP13.15□□□□□ -0.31
C12orf40-201ENST00000324616 MAP4K4O95819 1239 aaPredicted RBP13.14□□□□□ -0.31
C12orf40-201ENST00000324616 XAGE3Q8WTP9 111 aa13.14□□□□□ -0.31
C12orf40-201ENST00000324616 PA2G4Q9UQ80 394 aaKnown RBP13.14□□□□□ -0.31
C12orf40-201ENST00000324616 WDR17Q8IZU2 1322 aa13.14□□□□□ -0.31
C12orf40-201ENST00000324616 COPS6Q7L5N1 327 aa13.14□□□□□ -0.31
C12orf40-201ENST00000324616 RIC3Q7Z5B4 369 aa13.14□□□□□ -0.31
C12orf40-201ENST00000324616 TNPO1Q92973 898 aaKnown RBP13.14□□□□□ -0.31
C12orf40-201ENST00000324616 NHSL1Q5SYE7 1610 aa13.13□□□□□ -0.31
C12orf40-201ENST00000324616 RAB3GAP1Q15042 981 aa13.13□□□□□ -0.31
C12orf40-201ENST00000324616 TTC5Q8N0Z6 440 aa13.13□□□□□ -0.31
C12orf40-201ENST00000324616 SNRPA1P09661 255 aaKnown RBP13.13□□□□□ -0.31
C12orf40-201ENST00000324616 HSP90AB4PQ58FF6 505 aa13.13□□□□□ -0.31
C12orf40-201ENST00000324616 BICC1Q9H694 974 aaKnown RBP13.13□□□□□ -0.31
C12orf40-201ENST00000324616 CABP4P57796 275 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms