RNA–Protein interactions for RNA: ENST00000324501.9

PSEN1-201, Transcript of presenilin 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PSEN1, Length 6,078 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-201ENST00000324501 ZNF622Q969S3 477 aaKnown RBP eCLIP8.64□□□□□ -1.03
PSEN1-201ENST00000324501 FLT4P35916 1363 aa8.63□□□□□ -1.03
PSEN1-201ENST00000324501 MRPL50Q8N5N7 158 aaKnown RBP8.63□□□□□ -1.03
PSEN1-201ENST00000324501 CCDC47Q96A33 483 aaKnown RBP8.63□□□□□ -1.03
PSEN1-201ENST00000324501 ZNF772Q68DY9 489 aaPredicted RBP8.63□□□□□ -1.03
PSEN1-201ENST00000324501 ANKRD13DQ6ZTN6 518 aa8.63□□□□□ -1.03
PSEN1-201ENST00000324501 HOOK1Q9UJC3 728 aaKnown RBP8.63□□□□□ -1.03
PSEN1-201ENST00000324501 ARHGEF12Q9NZN5 1544 aa8.63□□□□□ -1.03
PSEN1-201ENST00000324501 SLC5A1P13866 664 aa8.63□□□□□ -1.03
PSEN1-201ENST00000324501 TSR1Q2NL82 804 aaKnown RBP8.63□□□□□ -1.03
PSEN1-201ENST00000324501 BLOC1S2Q6QNY1 142 aa8.63□□□□□ -1.03
PSEN1-201ENST00000324501 GOLIM4O00461 696 aa8.63□□□□□ -1.03
PSEN1-201ENST00000324501 TPM3P06753 285 aa8.63□□□□□ -1.03
PSEN1-201ENST00000324501 CCAR2Q8N163 923 aaKnown RBP8.63□□□□□ -1.03
PSEN1-201ENST00000324501 HSP90AB3PQ58FF7 597 aa8.63□□□□□ -1.03
PSEN1-201ENST00000324501 COL17A1Q9UMD9 1497 aaPredicted RBP8.62□□□□□ -1.03
PSEN1-201ENST00000324501 DZIP1Q86YF9 867 aaKnown RBP8.62□□□□□ -1.03
PSEN1-201ENST00000324501 SIRT1Q96EB6 747 aa8.62□□□□□ -1.03
PSEN1-201ENST00000324501 RSPH6AQ9H0K4 717 aa8.62□□□□□ -1.03
PSEN1-201ENST00000324501 UBAC1Q9BSL1 405 aa8.62□□□□□ -1.03
PSEN1-201ENST00000324501 ARHGEF5Q12774 1597 aa8.62□□□□□ -1.03
PSEN1-201ENST00000324501 C6orf229H3BNL8 230 aa8.62□□□□□ -1.03
PSEN1-201ENST00000324501 POLR3DP05423 398 aaPredicted RBP8.62□□□□□ -1.03
PSEN1-201ENST00000324501 IQSEC3Q9UPP2 1182 aaPredicted RBP8.62□□□□□ -1.03
PSEN1-201ENST00000324501 PPFIA3O75145 1194 aa8.62□□□□□ -1.03
PSEN1-201ENST00000324501 IMMTQ16891 758 aaKnown RBP8.62□□□□□ -1.03
PSEN1-201ENST00000324501 CCAR1Q8IX12 1150 aaKnown RBP8.62□□□□□ -1.03
PSEN1-201ENST00000324501 MAP3K5Q99683 1374 aa8.62□□□□□ -1.03
PSEN1-201ENST00000324501 NBPF6Q5VWK0 638 aa8.62□□□□□ -1.03
PSEN1-201ENST00000324501 LDHAL6AQ6ZMR3 332 aa8.62□□□□□ -1.03
PSEN1-201ENST00000324501 NBPF5PQ86XG9 351 aaPredicted RBP8.62□□□□□ -1.03
PSEN1-201ENST00000324501 NBPF4Q96M43 638 aa8.62□□□□□ -1.03
PSEN1-201ENST00000324501 SDF4Q9BRK5 362 aa8.62□□□□□ -1.03
PSEN1-201ENST00000324501 UPF3BQ9BZI7 483 aaKnown RBP8.62□□□□□ -1.03
PSEN1-201ENST00000324501 CWF19L2Q2TBE0 894 aaKnown RBP8.61□□□□□ -1.03
PSEN1-201ENST00000324501 PA2G4Q9UQ80 394 aaKnown RBP8.61□□□□□ -1.03
PSEN1-201ENST00000324501 GLRX3O76003 335 aaKnown RBP8.61□□□□□ -1.03
PSEN1-201ENST00000324501 CCDC83Q8IWF9 413 aa8.61□□□□□ -1.03
PSEN1-201ENST00000324501 IP6K1Q92551 441 aa8.61□□□□□ -1.03
PSEN1-201ENST00000324501 RNMTO43148 476 aaKnown RBP8.61□□□□□ -1.03
PSEN1-201ENST00000324501 STK38Q15208 465 aa8.61□□□□□ -1.03
PSEN1-201ENST00000324501 LARP1BQ659C4 914 aaKnown RBP8.61□□□□□ -1.03
PSEN1-201ENST00000324501 RAB11FIP4Q86YS3 637 aa8.61□□□□□ -1.03
PSEN1-201ENST00000324501 C16orf71Q8IYS4 520 aaPredicted RBP8.61□□□□□ -1.03
PSEN1-201ENST00000324501 TMEM2Q9UHN6 1383 aa8.61□□□□□ -1.03
PSEN1-201ENST00000324501 IL16Q14005 1332 aa8.61□□□□□ -1.03
PSEN1-201ENST00000324501 TRAK2O60296 914 aa8.61□□□□□ -1.03
PSEN1-201ENST00000324501 PHAXQ9H814 394 aaKnown RBP8.61□□□□□ -1.03
PSEN1-201ENST00000324501 CCDC82Q8N4S0 544 aa8.6□□□□□ -1.03
PSEN1-201ENST00000324501 MBD5Q9P267 1494 aa8.6□□□□□ -1.03
PSEN1-201ENST00000324501 TPM1P09493 284 aa8.6□□□□□ -1.03
PSEN1-201ENST00000324501 CDK5RAP3Q96JB5 506 aa8.6□□□□□ -1.03
PSEN1-201ENST00000324501 POLR3AO14802 1390 aaPredicted RBP8.6□□□□□ -1.03
PSEN1-201ENST00000324501 ANKRD1Q15327 319 aa8.6□□□□□ -1.03
PSEN1-201ENST00000324501 CCDC144CPQ8IYA2 1237 aa8.6□□□□□ -1.03
PSEN1-201ENST00000324501 PDILTQ8N807 584 aa8.6□□□□□ -1.03
PSEN1-201ENST00000324501 ARHGEF10O15013 1369 aa8.6□□□□□ -1.03
PSEN1-201ENST00000324501 PREX2Q70Z35 1606 aa8.6□□□□□ -1.03
PSEN1-201ENST00000324501 DDX46Q7L014 1031 aaKnown RBP8.6□□□□□ -1.03
PSEN1-201ENST00000324501 LGR6Q9HBX8 967 aa8.6□□□□□ -1.03
PSEN1-201ENST00000324501 NIP7Q9Y221 180 aaKnown RBP eCLIP8.6□□□□□ -1.03
PSEN1-201ENST00000324501 GUCY1B3Q02153 619 aa8.6□□□□□ -1.03
PSEN1-201ENST00000324501 OLFM4Q6UX06 510 aa8.6□□□□□ -1.03
PSEN1-201ENST00000324501 CEP89Q96ST8 783 aa8.6□□□□□ -1.03
PSEN1-201ENST00000324501 MCM2P49736 904 aa8.59□□□□□ -1.03
PSEN1-201ENST00000324501 HAND2P61296 217 aa8.59□□□□□ -1.03
PSEN1-201ENST00000324501 DZIP3Q86Y13 1208 aaKnown RBP8.59□□□□□ -1.03
PSEN1-201ENST00000324501 TRIM22Q8IYM9 498 aa8.59□□□□□ -1.03
PSEN1-201ENST00000324501 CTNNA3Q9UI47 895 aa8.59□□□□□ -1.03
PSEN1-201ENST00000324501 IL13P35225 146 aa8.59□□□□□ -1.03
PSEN1-201ENST00000324501 BAG6P46379 1132 aa8.59□□□□□ -1.03
PSEN1-201ENST00000324501 ZNF396Q96N95 335 aaPredicted RBP8.59□□□□□ -1.03
PSEN1-201ENST00000324501 RANBP6O60518 1105 aaKnown RBP8.59□□□□□ -1.03
PSEN1-201ENST00000324501 ST5P78524 1137 aa8.59□□□□□ -1.03
PSEN1-201ENST00000324501 FAM98CQ17RN3 349 aaKnown RBP8.59□□□□□ -1.03
PSEN1-201ENST00000324501 CRACR2BQ8N4Y2 399 aaPredicted RBP8.59□□□□□ -1.03
PSEN1-201ENST00000324501 PCDHB15Q9Y5E8 787 aa8.59□□□□□ -1.03
PSEN1-201ENST00000324501 F8W031 263 aaPredicted RBP8.59□□□□□ -1.03
PSEN1-201ENST00000324501 PER1O15534 1290 aaPredicted RBP8.59□□□□□ -1.03
PSEN1-201ENST00000324501 NAPBQ9H115 298 aa8.59□□□□□ -1.03
PSEN1-201ENST00000324501 ME1P48163 572 aa8.59□□□□□ -1.03
PSEN1-201ENST00000324501 MAP3K12Q12852 859 aa8.59□□□□□ -1.03
PSEN1-201ENST00000324501 TMEM132AQ24JP5 1023 aa8.59□□□□□ -1.03
PSEN1-201ENST00000324501 ANKRD20A12PQ8NF67 263 aa8.59□□□□□ -1.03
PSEN1-201ENST00000324501 SETDB2Q96T68 719 aa8.59□□□□□ -1.03
PSEN1-201ENST00000324501 ZHX3Q9H4I2 956 aa8.59□□□□□ -1.03
PSEN1-201ENST00000324501 MKNK2Q9HBH9 465 aa8.59□□□□□ -1.03
PSEN1-201ENST00000324501 ZFYVE9O95405 1425 aa8.59□□□□□ -1.04
PSEN1-201ENST00000324501 RLBP1P12271 317 aa8.58□□□□□ -1.04
PSEN1-201ENST00000324501 BRPF1P55201 1214 aaPredicted RBP8.58□□□□□ -1.04
PSEN1-201ENST00000324501 PRM3Q9NNZ6 103 aa8.58□□□□□ -1.04
PSEN1-201ENST00000324501 SOGA3Q5TF21 947 aa8.58□□□□□ -1.04
PSEN1-201ENST00000324501 G2E3Q7L622 706 aa8.58□□□□□ -1.04
PSEN1-201ENST00000324501 MPNDQ8N594 471 aa8.58□□□□□ -1.04
PSEN1-201ENST00000324501 JAG2Q9Y219 1238 aa8.58□□□□□ -1.04
PSEN1-201ENST00000324501 EDC4Q6P2E9 1401 aaKnown RBP8.58□□□□□ -1.04
PSEN1-201ENST00000324501 PCDH11XQ9BZA7 1347 aa8.58□□□□□ -1.04
PSEN1-201ENST00000324501 PCDH11YQ9BZA8 1340 aa8.58□□□□□ -1.04
PSEN1-201ENST00000324501 METP08581 1390 aa8.58□□□□□ -1.04
PSEN1-201ENST00000324501 KRT18P05783 430 aaKnown RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms