RNA–Protein interactions for RNA: ENST00000324106.8

CD28-201, Transcript of CD28 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD28, Length 4,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-201ENST00000324106 CEP131Q9UPN4 1083 aa10.55□□□□□ -0.72
CD28-201ENST00000324106 PIK3R4Q99570 1358 aa10.55□□□□□ -0.72
CD28-201ENST00000324106 KCNA6P17658 529 aa10.55□□□□□ -0.72
CD28-201ENST00000324106 FLIIQ13045 1269 aa10.55□□□□□ -0.72
CD28-201ENST00000324106 ZNHIT6Q9NWK9 470 aaKnown RBP10.55□□□□□ -0.72
CD28-201ENST00000324106 NCKAP5LQ9HCH0 1330 aa10.55□□□□□ -0.72
CD28-201ENST00000324106 HMGB1P09429 215 aaKnown RBP10.55□□□□□ -0.72
CD28-201ENST00000324106 DEKP35659 375 aaKnown RBP10.55□□□□□ -0.72
CD28-201ENST00000324106 ANKRD18AQ8IVF6 992 aa10.55□□□□□ -0.72
CD28-201ENST00000324106 THUMPD2Q9BTF0 503 aaKnown RBP10.55□□□□□ -0.72
CD28-201ENST00000324106 DCTN1Q14203 1278 aa10.54□□□□□ -0.72
CD28-201ENST00000324106 CCDC96Q2M329 555 aa10.54□□□□□ -0.72
CD28-201ENST00000324106 HSP90AB2PQ58FF8 381 aa10.54□□□□□ -0.72
CD28-201ENST00000324106 ANKRD13DQ6ZTN6 518 aa10.54□□□□□ -0.72
CD28-201ENST00000324106 ABCC2Q92887 1545 aa10.54□□□□□ -0.72
CD28-201ENST00000324106 KDM4AO75164 1064 aa10.54□□□□□ -0.72
CD28-201ENST00000324106 KRT85P78386 507 aa10.54□□□□□ -0.72
CD28-201ENST00000324106 AKAP4Q5JQC9 854 aa10.54□□□□□ -0.72
CD28-201ENST00000324106 WDR33Q9C0J8 1336 aaKnown RBP10.54□□□□□ -0.72
CD28-201ENST00000324106 RAPGEF6Q8TEU7 1601 aa10.54□□□□□ -0.72
CD28-201ENST00000324106 SSBP05455 408 aaKnown RBP eCLIP10.54□□□□□ -0.72
CD28-201ENST00000324106 SLFN5Q08AF3 891 aa10.54□□□□□ -0.72
CD28-201ENST00000324106 TRPM2O94759 1503 aa10.54□□□□□ -0.72
CD28-201ENST00000324106 SCLT1Q96NL6 688 aa10.54□□□□□ -0.72
CD28-201ENST00000324106 SPINK5Q9NQ38 1064 aaPredicted RBP10.54□□□□□ -0.72
CD28-201ENST00000324106 EYA3Q99504 573 aa10.53□□□□□ -0.72
CD28-201ENST00000324106 CFAP45Q9UL16 551 aa10.53□□□□□ -0.72
CD28-201ENST00000324106 EXOC6BQ9Y2D4 811 aa10.53□□□□□ -0.72
CD28-201ENST00000324106 PPP1R12BO60237 982 aaPredicted RBP10.53□□□□□ -0.72
CD28-201ENST00000324106 CWC27Q6UX04 472 aaKnown RBP10.53□□□□□ -0.72
CD28-201ENST00000324106 CCDC12Q8WUD4 166 aaPredicted RBP10.53□□□□□ -0.72
CD28-201ENST00000324106 MX1P20591 662 aa10.53□□□□□ -0.72
CD28-201ENST00000324106 PDE4BQ07343 736 aa10.53□□□□□ -0.72
CD28-201ENST00000324106 TMEM87AQ8NBN3 555 aa10.53□□□□□ -0.72
CD28-201ENST00000324106 PDRG1Q9NUG6 133 aa10.53□□□□□ -0.72
CD28-201ENST00000324106 CLEC11AQ9Y240 323 aa10.53□□□□□ -0.72
CD28-201ENST00000324106 CEP170Q5SW79 1584 aa10.52□□□□□ -0.72
CD28-201ENST00000324106 ME1P48163 572 aa10.52□□□□□ -0.72
CD28-201ENST00000324106 LARP1BQ659C4 914 aaKnown RBP10.52□□□□□ -0.72
CD28-201ENST00000324106 JAKMIP1Q96N16 626 aaKnown RBP10.52□□□□□ -0.72
CD28-201ENST00000324106 ZC3H12CQ9C0D7 883 aaKnown RBP10.52□□□□□ -0.72
CD28-201ENST00000324106 IL16Q14005 1332 aa10.52□□□□□ -0.73
CD28-201ENST00000324106 SMC2O95347 1197 aa10.52□□□□□ -0.73
CD28-201ENST00000324106 TMEM57Q8N5G2 664 aa10.52□□□□□ -0.73
CD28-201ENST00000324106 PHAXQ9H814 394 aaKnown RBP10.52□□□□□ -0.73
CD28-201ENST00000324106 GCP02774 474 aa10.52□□□□□ -0.73
CD28-201ENST00000324106 CCDC178Q5BJE1 867 aa10.52□□□□□ -0.73
CD28-201ENST00000324106 UBE3BQ7Z3V4 1068 aa10.52□□□□□ -0.73
CD28-201ENST00000324106 ACSBG1Q96GR2 724 aa10.52□□□□□ -0.73
CD28-201ENST00000324106 FLT4P35916 1363 aa10.52□□□□□ -0.73
CD28-201ENST00000324106 B4DLN1 442 aa10.51□□□□□ -0.73
CD28-201ENST00000324106 RANBP6O60518 1105 aaKnown RBP10.51□□□□□ -0.73
CD28-201ENST00000324106 MRPL12P52815 198 aaKnown RBP10.51□□□□□ -0.73
CD28-201ENST00000324106 DCAF5Q96JK2 942 aa10.51□□□□□ -0.73
CD28-201ENST00000324106 RTN4Q9NQC3 1192 aaKnown RBP10.51□□□□□ -0.73
CD28-201ENST00000324106 ZNF213O14771 459 aa10.51□□□□□ -0.73
CD28-201ENST00000324106 KIF5BP33176 963 aa10.51□□□□□ -0.73
CD28-201ENST00000324106 BAG6P46379 1132 aa10.51□□□□□ -0.73
CD28-201ENST00000324106 MAP3K2Q9Y2U5 619 aa10.51□□□□□ -0.73
CD28-201ENST00000324106 CTTNBP2Q8WZ74 1663 aa10.51□□□□□ -0.73
CD28-201ENST00000324106 PPIP5K1Q6PFW1 1433 aa10.51□□□□□ -0.73
CD28-201ENST00000324106 MATR3P43243 847 aaKnown RBP eCLIP10.51□□□□□ -0.73
CD28-201ENST00000324106 CRNKL1Q9BZJ0 848 aaKnown RBP10.51□□□□□ -0.73
CD28-201ENST00000324106 BOLA2Q9H3K6 86 aa10.51□□□□□ -0.73
CD28-201ENST00000324106 ATP10AO60312 1499 aa10.51□□□□□ -0.73
CD28-201ENST00000324106 KIF20AO95235 890 aa10.5□□□□□ -0.73
CD28-201ENST00000324106 STK3Q13188 491 aa10.5□□□□□ -0.73
CD28-201ENST00000324106 SSH1Q8WYL5 1049 aa10.5□□□□□ -0.73
CD28-201ENST00000324106 ACBD3Q9H3P7 528 aa10.5□□□□□ -0.73
CD28-201ENST00000324106 NIP7Q9Y221 180 aaKnown RBP eCLIP10.5□□□□□ -0.73
CD28-201ENST00000324106 POTEJP0CG39 1038 aa10.5□□□□□ -0.73
CD28-201ENST00000324106 LMOD1P29536 600 aaPredicted RBP10.5□□□□□ -0.73
CD28-201ENST00000324106 PDILTQ8N807 584 aa10.5□□□□□ -0.73
CD28-201ENST00000324106 RUFY1Q96T51 708 aa10.5□□□□□ -0.73
CD28-201ENST00000324106 RPRD2Q5VT52 1461 aaKnown RBP10.5□□□□□ -0.73
CD28-201ENST00000324106 PCDH11XQ9BZA7 1347 aa10.5□□□□□ -0.73
CD28-201ENST00000324106 PCDH11YQ9BZA8 1340 aa10.5□□□□□ -0.73
CD28-201ENST00000324106 CCP110O43303 1012 aa10.5□□□□□ -0.73
CD28-201ENST00000324106 TMEM266Q2M3C6 531 aa10.5□□□□□ -0.73
CD28-201ENST00000324106 CATIPQ7Z7H3 387 aa10.5□□□□□ -0.73
CD28-201ENST00000324106 MAP4K4O95819 1239 aaPredicted RBP10.5□□□□□ -0.73
CD28-201ENST00000324106 UTP14AQ9BVJ6 771 aaKnown RBP10.5□□□□□ -0.73
CD28-201ENST00000324106 PI4KAP2A4QPH2 592 aa10.49□□□□□ -0.73
CD28-201ENST00000324106 FIBPO43427 364 aa10.49□□□□□ -0.73
CD28-201ENST00000324106 ALDH1L1O75891 902 aa10.49□□□□□ -0.73
CD28-201ENST00000324106 ZNF804AQ7Z570 1209 aa10.49□□□□□ -0.73
CD28-201ENST00000324106 NUTM1Q86Y26 1132 aa10.49□□□□□ -0.73
CD28-201ENST00000324106 PI4KAP1Q8N8J0 262 aa10.49□□□□□ -0.73
CD28-201ENST00000324106 ECHDC1Q9NTX5 307 aa10.49□□□□□ -0.73
CD28-201ENST00000324106 ARHGEF10O15013 1369 aa10.49□□□□□ -0.73
CD28-201ENST00000324106 UGGT2Q9NYU1 1516 aa10.49□□□□□ -0.73
CD28-201ENST00000324106 PLCG2P16885 1265 aa10.49□□□□□ -0.73
CD28-201ENST00000324106 CEP57L1Q8IYX8 460 aa10.49□□□□□ -0.73
CD28-201ENST00000324106 ZFYP08048 801 aaPredicted RBP10.49□□□□□ -0.73
CD28-201ENST00000324106 IL27Q8NEV9 243 aa10.49□□□□□ -0.73
CD28-201ENST00000324106 LRRFIP2Q9Y608 721 aaKnown RBP10.49□□□□□ -0.73
CD28-201ENST00000324106 ATP5J2-PTCD1G3V325 749 aa10.49□□□□□ -0.73
CD28-201ENST00000324106 ZNF592Q92610 1267 aa10.49□□□□□ -0.73
CD28-201ENST00000324106 TANGO6Q9C0B7 1094 aa10.49□□□□□ -0.73
CD28-201ENST00000324106 BTG4Q9NY30 223 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms