RNA–Protein interactions for RNA: ENST00000322310.9

SSNA1-201, Transcript of SS nuclear autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSNA1, Length 896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-201ENST00000322310 ZC3H4Q9UPT8 1303 aaKnown RBP26.84■■□□□ 1.89
SSNA1-201ENST00000322310 AFDNP55196 1824 aaKnown RBP26.83■■□□□ 1.89
SSNA1-201ENST00000322310 CYP19A1P11511 503 aaPredicted RBP26.83■■□□□ 1.89
SSNA1-201ENST00000322310 MORC1Q86VD1 984 aa26.83■■□□□ 1.89
SSNA1-201ENST00000322310 GLTPD2A6NH11 291 aa26.82■■□□□ 1.88
SSNA1-201ENST00000322310 VEGFAP15692 232 aaPredicted RBP26.82■■□□□ 1.88
SSNA1-201ENST00000322310 SLC39A6Q13433 755 aa26.82■■□□□ 1.88
SSNA1-201ENST00000322310 SLC52A2Q9HAB3 445 aa26.82■■□□□ 1.88
SSNA1-201ENST00000322310 LGR6Q9HBX8 967 aa26.82■■□□□ 1.88
SSNA1-201ENST00000322310 NARFQ9UHQ1 456 aa26.82■■□□□ 1.88
SSNA1-201ENST00000322310 COL15A1P39059 1388 aa26.82■■□□□ 1.88
SSNA1-201ENST00000322310 NRXN2Q9P2S2 1712 aa26.81■■□□□ 1.88
SSNA1-201ENST00000322310 SERPINB2P05120 415 aa26.8■■□□□ 1.88
SSNA1-201ENST00000322310 IL13P35225 146 aa26.8■■□□□ 1.88
SSNA1-201ENST00000322310 AKAP4Q5JQC9 854 aa26.8■■□□□ 1.88
SSNA1-201ENST00000322310 BCL2L12Q9HB09 334 aa26.8■■□□□ 1.88
SSNA1-201ENST00000322310 ZBTB1Q9Y2K1 713 aa26.8■■□□□ 1.88
SSNA1-201ENST00000322310 TIAM2Q8IVF5 1701 aa26.79■■□□□ 1.88
SSNA1-201ENST00000322310 DLEC1Q9Y238 1755 aa26.79■■□□□ 1.88
SSNA1-201ENST00000322310 TTLL6Q8N841 843 aa26.79■■□□□ 1.88
SSNA1-201ENST00000322310 CARMIL3Q8ND23 1372 aa26.79■■□□□ 1.88
SSNA1-201ENST00000322310 NFKBIEO00221 500 aa26.78■■□□□ 1.88
SSNA1-201ENST00000322310 HSPA1AP0DMV8 641 aaKnown RBP26.78■■□□□ 1.88
SSNA1-201ENST00000322310 HSPA1BP0DMV9 641 aaKnown RBP26.78■■□□□ 1.88
SSNA1-201ENST00000322310 C2CD5Q86YS7 1000 aa26.78■■□□□ 1.88
SSNA1-201ENST00000322310 MRC1P22897 1456 aa26.77■■□□□ 1.88
SSNA1-201ENST00000322310 RNMTO43148 476 aaKnown RBP26.75■■□□□ 1.87
SSNA1-201ENST00000322310 TIMELESSQ9UNS1 1208 aa26.75■■□□□ 1.87
SSNA1-201ENST00000322310 POTECB2RU33 542 aa26.73■■□□□ 1.87
SSNA1-201ENST00000322310 H0YIN7 160 aa26.73■■□□□ 1.87
SSNA1-201ENST00000322310 BICDL1Q6ZP65 573 aa26.73■■□□□ 1.87
SSNA1-201ENST00000322310 HSPA5P11021 654 aaKnown RBP26.72■■□□□ 1.87
SSNA1-201ENST00000322310 CANXP27824 592 aaKnown RBP26.72■■□□□ 1.87
SSNA1-201ENST00000322310 CCDC88AQ3V6T2 1871 aa26.72■■□□□ 1.87
SSNA1-201ENST00000322310 HMOX1P09601 288 aa26.71■■□□□ 1.87
SSNA1-201ENST00000322310 EIF4G2P78344 907 aaKnown RBP eCLIP26.7■■□□□ 1.86
SSNA1-201ENST00000322310 ZNF219Q9P2Y4 722 aaPredicted RBP26.7■■□□□ 1.86
SSNA1-201ENST00000322310 VSIG10Q8N0Z9 540 aa26.68■■□□□ 1.86
SSNA1-201ENST00000322310 ZNF622Q969S3 477 aaKnown RBP eCLIP26.68■■□□□ 1.86
SSNA1-201ENST00000322310 VIRMAQ69YN4 1812 aaKnown RBP26.67■■□□□ 1.86
SSNA1-201ENST00000322310 C21orf2O43822 256 aa26.67■■□□□ 1.86
SSNA1-201ENST00000322310 MTHFSDQ2M296 383 aaKnown RBP26.67■■□□□ 1.86
SSNA1-201ENST00000322310 DPY19L2Q6NUT2 758 aa26.67■■□□□ 1.86
SSNA1-201ENST00000322310 CCDC24Q8N4L8 307 aa26.67■■□□□ 1.86
SSNA1-201ENST00000322310 KNSTRNQ9Y448 316 aa26.67■■□□□ 1.86
SSNA1-201ENST00000322310 ANKRD31Q8N7Z5 1873 aa26.66■■□□□ 1.86
SSNA1-201ENST00000322310 TBC1D9BQ66K14 1250 aa26.66■■□□□ 1.86
SSNA1-201ENST00000322310 EIF5P55010 431 aaKnown RBP26.65■■□□□ 1.86
SSNA1-201ENST00000322310 TRIM26Q12899 539 aaPredicted RBP26.65■■□□□ 1.86
SSNA1-201ENST00000322310 ERFEQ4G0M1 354 aa26.65■■□□□ 1.86
SSNA1-201ENST00000322310 UBR2Q8IWV8 1755 aa26.65■■□□□ 1.86
SSNA1-201ENST00000322310 COL11A2P13942 1736 aaPredicted RBP26.64■■□□□ 1.85
SSNA1-201ENST00000322310 STARD3NLO95772 234 aa26.62■■□□□ 1.85
SSNA1-201ENST00000322310 POTEIP0CG38 1075 aa26.62■■□□□ 1.85
SSNA1-201ENST00000322310 POTEJP0CG39 1038 aa26.62■■□□□ 1.85
SSNA1-201ENST00000322310 PRR5LQ6MZQ0 368 aa26.62■■□□□ 1.85
SSNA1-201ENST00000322310 BRIP1Q9BX63 1249 aa26.62■■□□□ 1.85
SSNA1-201ENST00000322310 MKRN1Q9UHC7 482 aaKnown RBP26.62■■□□□ 1.85
SSNA1-201ENST00000322310 PDE6BP35913 854 aa26.61■■□□□ 1.85
SSNA1-201ENST00000322310 AMER1Q5JTC6 1135 aaPredicted RBP26.61■■□□□ 1.85
SSNA1-201ENST00000322310 TTC5Q8N0Z6 440 aa26.61■■□□□ 1.85
SSNA1-201ENST00000322310 ZNF330Q9Y3S2 320 aaPredicted RBP26.61■■□□□ 1.85
SSNA1-201ENST00000322310 SCN7AQ01118 1682 aa26.6■■□□□ 1.85
SSNA1-201ENST00000322310 FER1L6Q2WGJ9 1857 aa26.6■■□□□ 1.85
SSNA1-201ENST00000322310 A0A087WZG4 1122 aa26.6■■□□□ 1.85
SSNA1-201ENST00000322310 CHADLQ6NUI6 762 aa26.6■■□□□ 1.85
SSNA1-201ENST00000322310 TBC1D2BQ9UPU7 963 aa26.6■■□□□ 1.85
SSNA1-201ENST00000322310 ZNF496Q96IT1 587 aaPredicted RBP26.59■■□□□ 1.85
SSNA1-201ENST00000322310 CREBZFQ9NS37 354 aa26.59■■□□□ 1.85
SSNA1-201ENST00000322310 DDNO94850 711 aaPredicted RBP26.58■■□□□ 1.85
SSNA1-201ENST00000322310 TAOK3Q9H2K8 898 aa26.58■■□□□ 1.85
SSNA1-201ENST00000322310 DICER1Q9UPY3 1922 aaKnown RBP26.58■■□□□ 1.85
SSNA1-201ENST00000322310 PDZRN3Q9UPQ7 1066 aa26.57■■□□□ 1.84
SSNA1-201ENST00000322310 LTBP3Q9NS15 1303 aa26.56■■□□□ 1.84
SSNA1-201ENST00000322310 HEG1Q9ULI3 1381 aa26.56■■□□□ 1.84
SSNA1-201ENST00000322310 DIAPH1O60610 1272 aaKnown RBP26.54■■□□□ 1.84
SSNA1-201ENST00000322310 ZNF790Q6PG37 636 aa26.54■■□□□ 1.84
SSNA1-201ENST00000322310 SLX4Q8IY92 1834 aa26.53■■□□□ 1.84
SSNA1-201ENST00000322310 PRPF40BQ6NWY9 871 aaKnown RBP26.53■■□□□ 1.84
SSNA1-201ENST00000322310 CNBD1Q8NA66 436 aa26.53■■□□□ 1.84
SSNA1-201ENST00000322310 PCGF6Q9BYE7 350 aa26.53■■□□□ 1.84
SSNA1-201ENST00000322310 CLSPNQ9HAW4 1339 aa26.53■■□□□ 1.84
SSNA1-201ENST00000322310 NPHP1O15259 732 aa26.52■■□□□ 1.84
SSNA1-201ENST00000322310 FOXN1O15353 648 aa26.52■■□□□ 1.84
SSNA1-201ENST00000322310 A1BGP04217 495 aa26.52■■□□□ 1.84
SSNA1-201ENST00000322310 IL6STP40189 918 aaPredicted RBP26.52■■□□□ 1.84
SSNA1-201ENST00000322310 TEFQ10587 303 aa26.52■■□□□ 1.84
SSNA1-201ENST00000322310 IL17REQ8NFR9 667 aa26.52■■□□□ 1.84
SSNA1-201ENST00000322310 CNKSR1Q969H4 720 aa26.52■■□□□ 1.84
SSNA1-201ENST00000322310 SETDB2Q96T68 719 aa26.52■■□□□ 1.84
SSNA1-201ENST00000322310 CACNA1SQ13698 1873 aa26.51■■□□□ 1.83
SSNA1-201ENST00000322310 CNTNAP1P78357 1384 aa26.51■■□□□ 1.83
SSNA1-201ENST00000322310 CAMTA2O94983 1202 aa26.51■■□□□ 1.83
SSNA1-201ENST00000322310 SRGNP10124 158 aa26.51■■□□□ 1.83
SSNA1-201ENST00000322310 STYK1Q6J9G0 422 aa26.51■■□□□ 1.83
SSNA1-201ENST00000322310 TEX13AQ9BXU3 409 aaPredicted RBP26.51■■□□□ 1.83
SSNA1-201ENST00000322310 ST5P78524 1137 aa26.49■■□□□ 1.83
SSNA1-201ENST00000322310 PASKQ96RG2 1323 aa26.48■■□□□ 1.83
SSNA1-201ENST00000322310 MASTLQ96GX5 879 aa26.48■■□□□ 1.83
SSNA1-201ENST00000322310 SIPA1L3O60292 1781 aaPredicted RBP26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms