RNA–Protein interactions for RNA: ENST00000321545.4

ZNF543-201, Transcript of zinc finger protein 543, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF543, Length 3,659 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF543-201ENST00000321545 STARD3NLO95772 234 aa13.96□□□□□ -0.17
ZNF543-201ENST00000321545 OTUD7AQ8TE49 926 aaPredicted RBP13.96□□□□□ -0.17
ZNF543-201ENST00000321545 BACH2Q9BYV9 841 aa13.96□□□□□ -0.17
ZNF543-201ENST00000321545 USP21Q9UK80 565 aa13.96□□□□□ -0.17
ZNF543-201ENST00000321545 ADAMTSL3P82987 1691 aa13.96□□□□□ -0.17
ZNF543-201ENST00000321545 ATP6V1AP38606 617 aa13.96□□□□□ -0.18
ZNF543-201ENST00000321545 HYPKQ9NX55 129 aa13.96□□□□□ -0.18
ZNF543-201ENST00000321545 ITSN1Q15811 1721 aa13.95□□□□□ -0.18
ZNF543-201ENST00000321545 SMIM5Q71RC9 77 aa13.95□□□□□ -0.18
ZNF543-201ENST00000321545 CCDC24Q8N4L8 307 aa13.94□□□□□ -0.18
ZNF543-201ENST00000321545 COL3A1P02461 1466 aaPredicted RBP13.94□□□□□ -0.18
ZNF543-201ENST00000321545 ARHGAP45Q92619 1136 aa13.94□□□□□ -0.18
ZNF543-201ENST00000321545 CARD10Q9BWT7 1032 aa13.94□□□□□ -0.18
ZNF543-201ENST00000321545 PNMA6EA0A0J9YXQ4 647 aa13.94□□□□□ -0.18
ZNF543-201ENST00000321545 TTLL7Q6ZT98 887 aa13.94□□□□□ -0.18
ZNF543-201ENST00000321545 LRRCC1Q9C099 1032 aa13.94□□□□□ -0.18
ZNF543-201ENST00000321545 CCDC8Q9H0W5 538 aaPredicted RBP13.94□□□□□ -0.18
ZNF543-201ENST00000321545 NAP1L2Q9ULW6 460 aaPredicted RBP13.94□□□□□ -0.18
ZNF543-201ENST00000321545 RTL1A6NKG5 1358 aa13.93□□□□□ -0.18
ZNF543-201ENST00000321545 RPAP2Q8IXW5 612 aaPredicted RBP13.93□□□□□ -0.18
ZNF543-201ENST00000321545 GCC1Q96CN9 775 aa13.93□□□□□ -0.18
ZNF543-201ENST00000321545 SOS2Q07890 1332 aaPredicted RBP13.93□□□□□ -0.18
ZNF543-201ENST00000321545 BECN1Q14457 450 aa13.93□□□□□ -0.18
ZNF543-201ENST00000321545 CEP85Q6P2H3 762 aa13.92□□□□□ -0.18
ZNF543-201ENST00000321545 KSR2Q6VAB6 950 aa13.92□□□□□ -0.18
ZNF543-201ENST00000321545 CLASRPQ8N2M8 674 aaKnown RBP13.92□□□□□ -0.18
ZNF543-201ENST00000321545 ANO2Q9NQ90 1003 aa13.92□□□□□ -0.18
ZNF543-201ENST00000321545 SSH2Q76I76 1423 aa13.92□□□□□ -0.18
ZNF543-201ENST00000321545 DDX21Q9NR30 783 aaKnown RBP eCLIP13.92□□□□□ -0.18
ZNF543-201ENST00000321545 DDRGK1Q96HY6 314 aa13.92□□□□□ -0.18
ZNF543-201ENST00000321545 DNAJC2Q99543 621 aaKnown RBP13.92□□□□□ -0.18
ZNF543-201ENST00000321545 SEC24BO95487 1268 aa13.91□□□□□ -0.18
ZNF543-201ENST00000321545 AACSQ86V21 672 aa13.91□□□□□ -0.18
ZNF543-201ENST00000321545 GSE1Q14687 1217 aa13.91□□□□□ -0.18
ZNF543-201ENST00000321545 GZF1Q9H116 711 aaPredicted RBP13.91□□□□□ -0.18
ZNF543-201ENST00000321545 KCNQ2O43526 872 aa13.91□□□□□ -0.18
ZNF543-201ENST00000321545 HSPA1LP34931 641 aa13.91□□□□□ -0.18
ZNF543-201ENST00000321545 HDAC5Q9UQL6 1122 aa13.91□□□□□ -0.18
ZNF543-201ENST00000321545 PIGBQ92521 554 aa13.9□□□□□ -0.18
ZNF543-201ENST00000321545 FAM89AQ96GI7 184 aa13.9□□□□□ -0.18
ZNF543-201ENST00000321545 FRAT2O75474 233 aaPredicted RBP13.9□□□□□ -0.18
ZNF543-201ENST00000321545 TRMT112Q9UI30 125 aaKnown RBP13.9□□□□□ -0.18
ZNF543-201ENST00000321545 KIAA1211Q6ZU35 1233 aa13.89□□□□□ -0.19
ZNF543-201ENST00000321545 IQSEC2Q5JU85 1478 aa13.89□□□□□ -0.19
ZNF543-201ENST00000321545 KIF20BQ96Q89 1820 aa13.89□□□□□ -0.19
ZNF543-201ENST00000321545 KDRP35968 1356 aa13.89□□□□□ -0.19
ZNF543-201ENST00000321545 GRM8O00222 908 aa13.89□□□□□ -0.19
ZNF543-201ENST00000321545 AAMPQ13685 434 aa13.89□□□□□ -0.19
ZNF543-201ENST00000321545 ANKRD44Q8N8A2 993 aa13.89□□□□□ -0.19
ZNF543-201ENST00000321545 USP44Q9H0E7 712 aa13.89□□□□□ -0.19
ZNF543-201ENST00000321545 KDM2BQ8NHM5 1336 aa13.88□□□□□ -0.19
ZNF543-201ENST00000321545 FOXD4L5Q5VV16 416 aaPredicted RBP13.88□□□□□ -0.19
ZNF543-201ENST00000321545 INTS3Q68E01 1043 aaKnown RBP13.88□□□□□ -0.19
ZNF543-201ENST00000321545 LMBR1LQ6UX01 489 aa13.88□□□□□ -0.19
ZNF543-201ENST00000321545 FOXD4L4Q8WXT5 416 aaPredicted RBP13.88□□□□□ -0.19
ZNF543-201ENST00000321545 WWC3Q9ULE0 1092 aa13.88□□□□□ -0.19
ZNF543-201ENST00000321545 GPATCH3Q96I76 525 aa13.88□□□□□ -0.19
ZNF543-201ENST00000321545 FGD1P98174 961 aa13.87□□□□□ -0.19
ZNF543-201ENST00000321545 C22orf23Q9BZE7 217 aa13.87□□□□□ -0.19
ZNF543-201ENST00000321545 BOLA2Q9H3K6 86 aa13.87□□□□□ -0.19
ZNF543-201ENST00000321545 BICC1Q9H694 974 aaKnown RBP13.87□□□□□ -0.19
ZNF543-201ENST00000321545 KIF24Q5T7B8 1368 aa13.87□□□□□ -0.19
ZNF543-201ENST00000321545 HSCBQ8IWL3 235 aa13.87□□□□□ -0.19
ZNF543-201ENST00000321545 KLHL34Q8N239 644 aa13.87□□□□□ -0.19
ZNF543-201ENST00000321545 CNNM1Q9NRU3 951 aa13.87□□□□□ -0.19
ZNF543-201ENST00000321545 DIAPH3Q9NSV4 1193 aa13.87□□□□□ -0.19
ZNF543-201ENST00000321545 ABCC4O15439 1325 aa13.87□□□□□ -0.19
ZNF543-201ENST00000321545 CCDC57Q2TAC2 916 aa13.87□□□□□ -0.19
ZNF543-201ENST00000321545 SIRT2Q8IXJ6 389 aa13.87□□□□□ -0.19
ZNF543-201ENST00000321545 HDAC1Q13547 482 aaPredicted RBP13.86□□□□□ -0.19
ZNF543-201ENST00000321545 LINS1Q8NG48 757 aa13.86□□□□□ -0.19
ZNF543-201ENST00000321545 CRB1P82279 1406 aa13.86□□□□□ -0.19
ZNF543-201ENST00000321545 NFKBIBQ15653 356 aa13.86□□□□□ -0.19
ZNF543-201ENST00000321545 CERKQ8TCT0 537 aa13.86□□□□□ -0.19
ZNF543-201ENST00000321545 NUCB1Q02818 461 aa13.85□□□□□ -0.19
ZNF543-201ENST00000321545 FOXD4L6Q3SYB3 417 aaPredicted RBP13.85□□□□□ -0.19
ZNF543-201ENST00000321545 FOXD4L3Q6VB84 417 aaPredicted RBP13.85□□□□□ -0.19
ZNF543-201ENST00000321545 DZIP3Q86Y13 1208 aaKnown RBP13.85□□□□□ -0.19
ZNF543-201ENST00000321545 ZNF594Q96JF6 807 aaPredicted RBP13.85□□□□□ -0.19
ZNF543-201ENST00000321545 ZBTB1Q9Y2K1 713 aa13.85□□□□□ -0.19
ZNF543-201ENST00000321545 NDUFB9Q9Y6M9 179 aa13.85□□□□□ -0.19
ZNF543-201ENST00000321545 PXDNQ92626 1479 aa13.85□□□□□ -0.19
ZNF543-201ENST00000321545 SUCLG2Q96I99 432 aa13.85□□□□□ -0.19
ZNF543-201ENST00000321545 NALCNQ8IZF0 1738 aa13.85□□□□□ -0.19
ZNF543-201ENST00000321545 CWC25Q9NXE8 425 aaPredicted RBP13.85□□□□□ -0.19
ZNF543-201ENST00000321545 MX1P20591 662 aa13.84□□□□□ -0.19
ZNF543-201ENST00000321545 SNRKQ9NRH2 765 aa13.84□□□□□ -0.19
ZNF543-201ENST00000321545 CWC27Q6UX04 472 aaKnown RBP13.84□□□□□ -0.19
ZNF543-201ENST00000321545 SMC5Q8IY18 1101 aa13.84□□□□□ -0.19
ZNF543-201ENST00000321545 HELBQ8NG08 1087 aaPredicted RBP13.84□□□□□ -0.19
ZNF543-201ENST00000321545 PODXL2Q9NZ53 605 aa13.84□□□□□ -0.19
ZNF543-201ENST00000321545 MEGF6O75095 1541 aa13.84□□□□□ -0.19
ZNF543-201ENST00000321545 SETD1AO15047 1707 aaKnown RBP13.84□□□□□ -0.19
ZNF543-201ENST00000321545 NCBP3Q53F19 620 aaKnown RBP13.84□□□□□ -0.19
ZNF543-201ENST00000321545 FSD1Q9BTV5 496 aa13.84□□□□□ -0.19
ZNF543-201ENST00000321545 QTRT2Q9H974 415 aaKnown RBP13.84□□□□□ -0.19
ZNF543-201ENST00000321545 CDC45O75419 566 aa13.83□□□□□ -0.2
ZNF543-201ENST00000321545 HCLS1P14317 486 aaPredicted RBP13.83□□□□□ -0.2
ZNF543-201ENST00000321545 FKBP4Q02790 459 aaKnown RBP eCLIP13.83□□□□□ -0.2
ZNF543-201ENST00000321545 ATP8B2P98198 1209 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms