RNA–Protein interactions for RNA: ENST00000321407.2

GCC1-201, Transcript of GRIP and coiled-coil domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCC1, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCC1-201ENST00000321407 IL17REQ8NFR9 667 aa17.64■□□□□ 0.41
GCC1-201ENST00000321407 KIF1BO60333 1816 aa17.64■□□□□ 0.41
GCC1-201ENST00000321407 MARCH6O60337 910 aa17.64■□□□□ 0.41
GCC1-201ENST00000321407 KCNQ4P56696 695 aa17.64■□□□□ 0.41
GCC1-201ENST00000321407 ATP2B2Q01814 1243 aa17.64■□□□□ 0.41
GCC1-201ENST00000321407 ARHGEF10O15013 1369 aa17.64■□□□□ 0.41
GCC1-201ENST00000321407 MYOM2P54296 1465 aa17.63■□□□□ 0.41
GCC1-201ENST00000321407 DZIP3Q86Y13 1208 aaKnown RBP17.63■□□□□ 0.41
GCC1-201ENST00000321407 TFCP2L1Q9NZI6 479 aa17.63■□□□□ 0.41
GCC1-201ENST00000321407 STK3Q13188 491 aa17.63■□□□□ 0.41
GCC1-201ENST00000321407 ARHGEF25Q86VW2 580 aa17.63■□□□□ 0.41
GCC1-201ENST00000321407 NPC1L1Q9UHC9 1359 aa17.63■□□□□ 0.41
GCC1-201ENST00000321407 C6orf229H3BNL8 230 aa17.62■□□□□ 0.41
GCC1-201ENST00000321407 HELBQ8NG08 1087 aaPredicted RBP17.62■□□□□ 0.41
GCC1-201ENST00000321407 HSP90AB3PQ58FF7 597 aa17.62■□□□□ 0.41
GCC1-201ENST00000321407 KSR2Q6VAB6 950 aa17.62■□□□□ 0.41
GCC1-201ENST00000321407 GNPATO15228 680 aa17.62■□□□□ 0.41
GCC1-201ENST00000321407 UPF3BQ9BZI7 483 aaKnown RBP17.62■□□□□ 0.41
GCC1-201ENST00000321407 ERICH2A1L162 156 aa17.62■□□□□ 0.41
GCC1-201ENST00000321407 CDK11BP21127 795 aaKnown RBP17.62■□□□□ 0.41
GCC1-201ENST00000321407 ZNF622Q969S3 477 aaKnown RBP eCLIP17.62■□□□□ 0.415e-6■■□□□ 12.2
GCC1-201ENST00000321407 MAP3K4Q9Y6R4 1608 aa17.61■□□□□ 0.41
GCC1-201ENST00000321407 ANKRD18BA2A2Z9 1011 aa17.61■□□□□ 0.41
GCC1-201ENST00000321407 ATP2B1P20020 1258 aa17.61■□□□□ 0.41
GCC1-201ENST00000321407 RNF17Q9BXT8 1623 aaKnown RBP17.61■□□□□ 0.41
GCC1-201ENST00000321407 HTATSF1O43719 755 aaKnown RBP17.61■□□□□ 0.41
GCC1-201ENST00000321407 IFIT1P09914 478 aaKnown RBP17.61■□□□□ 0.41
GCC1-201ENST00000321407 GRM8O00222 908 aa17.61■□□□□ 0.41
GCC1-201ENST00000321407 CREBRFQ8IUR6 639 aa17.61■□□□□ 0.41
GCC1-201ENST00000321407 C16orf71Q8IYS4 520 aaPredicted RBP17.61■□□□□ 0.41
GCC1-201ENST00000321407 FAM89AQ96GI7 184 aa17.61■□□□□ 0.41
GCC1-201ENST00000321407 SMC3Q9UQE7 1217 aa17.61■□□□□ 0.41
GCC1-201ENST00000321407 KIF3AQ9Y496 699 aa17.61■□□□□ 0.41
GCC1-201ENST00000321407 IQGAP3Q86VI3 1631 aa17.6■□□□□ 0.41
GCC1-201ENST00000321407 RPGRQ92834 1020 aaKnown RBP17.6■□□□□ 0.41
GCC1-201ENST00000321407 DIP2CQ9Y2E4 1556 aa17.6■□□□□ 0.41
GCC1-201ENST00000321407 USP6P35125 1406 aa17.6■□□□□ 0.41
GCC1-201ENST00000321407 CEP152O94986 1710 aa17.59■□□□□ 0.41
GCC1-201ENST00000321407 CHL1O00533 1208 aa17.59■□□□□ 0.41
GCC1-201ENST00000321407 USP16Q9Y5T5 823 aa17.59■□□□□ 0.41
GCC1-201ENST00000321407 ZSCAN29Q8IWY8 852 aaPredicted RBP17.59■□□□□ 0.41
GCC1-201ENST00000321407 IKQ13123 557 aaPredicted RBP17.58■□□□□ 0.41
GCC1-201ENST00000321407 SLC4A8Q2Y0W8 1093 aa17.58■□□□□ 0.41
GCC1-201ENST00000321407 KLHDC4Q8TBB5 520 aa17.58■□□□□ 0.41
GCC1-201ENST00000321407 SETDB2Q96T68 719 aa17.58■□□□□ 0.4
GCC1-201ENST00000321407 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.58■□□□□ 0.4
GCC1-201ENST00000321407 SLC52A2Q9HAB3 445 aa17.58■□□□□ 0.4
GCC1-201ENST00000321407 DDX49Q9Y6V7 483 aaKnown RBP17.58■□□□□ 0.4
GCC1-201ENST00000321407 GOLGA6L3A6NEY3 463 aa17.58■□□□□ 0.4
GCC1-201ENST00000321407 CCNL1Q9UK58 526 aaPredicted RBP17.58■□□□□ 0.4
GCC1-201ENST00000321407 SMARCC1Q92922 1105 aaPredicted RBP17.57■□□□□ 0.4
GCC1-201ENST00000321407 DNTTIP2Q5QJE6 756 aaKnown RBP17.57■□□□□ 0.4
GCC1-201ENST00000321407 GLRX3O76003 335 aaKnown RBP17.57■□□□□ 0.4
GCC1-201ENST00000321407 LARP6Q9BRS8 491 aaKnown RBP17.57■□□□□ 0.4
GCC1-201ENST00000321407 RTCBQ9Y3I0 505 aaKnown RBP17.57■□□□□ 0.4
GCC1-201ENST00000321407 KDM5CP41229 1560 aa17.57■□□□□ 0.4
GCC1-201ENST00000321407 GOLIM4O00461 696 aa17.57■□□□□ 0.4
GCC1-201ENST00000321407 LINS1Q8NG48 757 aa17.57■□□□□ 0.4
GCC1-201ENST00000321407 DDX21Q9NR30 783 aaKnown RBP eCLIP17.57■□□□□ 0.4
GCC1-201ENST00000321407 AXIN2Q9Y2T1 843 aa17.57■□□□□ 0.4
GCC1-201ENST00000321407 TDO2P48775 406 aa17.56■□□□□ 0.4
GCC1-201ENST00000321407 HCLS1P14317 486 aaPredicted RBP17.56■□□□□ 0.4
GCC1-201ENST00000321407 DRC7Q8IY82 874 aa17.56■□□□□ 0.4
GCC1-201ENST00000321407 DDX46Q7L014 1031 aaKnown RBP17.55■□□□□ 0.4
GCC1-201ENST00000321407 RHPN1Q8TCX5 695 aa17.55■□□□□ 0.4
GCC1-201ENST00000321407 PIBF1Q8WXW3 757 aa17.55■□□□□ 0.4
GCC1-201ENST00000321407 JAG2Q9Y219 1238 aa17.55■□□□□ 0.4
GCC1-201ENST00000321407 TRIM29Q14134 588 aa17.55■□□□□ 0.4
GCC1-201ENST00000321407 PHKG2P15735 406 aa17.54■□□□□ 0.4
GCC1-201ENST00000321407 PRAMEF22A3QJZ6 481 aa17.54■□□□□ 0.4
GCC1-201ENST00000321407 MINDY4BA8MYZ0 360 aa17.54■□□□□ 0.4
GCC1-201ENST00000321407 ARHGAP45Q92619 1136 aa17.54■□□□□ 0.4
GCC1-201ENST00000321407 CTDP1Q9Y5B0 961 aaPredicted RBP17.54■□□□□ 0.4
GCC1-201ENST00000321407 USP19O94966 1318 aa17.54■□□□□ 0.4
GCC1-201ENST00000321407 CAVIN4Q5BKX8 364 aa17.53■□□□□ 0.4
GCC1-201ENST00000321407 AIDAQ96BJ3 306 aa17.53■□□□□ 0.4
GCC1-201ENST00000321407 JAKMIP1Q96N16 626 aaKnown RBP17.53■□□□□ 0.4
GCC1-201ENST00000321407 ABCA6Q8N139 1617 aa17.53■□□□□ 0.4
GCC1-201ENST00000321407 INSRP06213 1382 aa17.53■□□□□ 0.4
GCC1-201ENST00000321407 ASAP1Q9ULH1 1129 aa17.53■□□□□ 0.4
GCC1-201ENST00000321407 ERBB3P21860 1342 aa17.53■□□□□ 0.4
GCC1-201ENST00000321407 KDM5AP29375 1690 aaKnown RBP17.53■□□□□ 0.4
GCC1-201ENST00000321407 PPFIA3O75145 1194 aa17.53■□□□□ 0.4
GCC1-201ENST00000321407 AKAP2Q9Y2D5 859 aa17.53■□□□□ 0.4
GCC1-201ENST00000321407 HIP1O00291 1037 aa17.52■□□□□ 0.4
GCC1-201ENST00000321407 DIP2BQ9P265 1576 aa17.52■□□□□ 0.4
GCC1-201ENST00000321407 RAB11FIP3O75154 756 aa17.52■□□□□ 0.4
GCC1-201ENST00000321407 EIF4A1P60842 406 aaKnown RBP17.52■□□□□ 0.4
GCC1-201ENST00000321407 PRPF40BQ6NWY9 871 aaKnown RBP17.52■□□□□ 0.4
GCC1-201ENST00000321407 NUP133Q8WUM0 1156 aa17.52■□□□□ 0.4
GCC1-201ENST00000321407 E9PCH4 1651 aa17.52■□□□□ 0.4
GCC1-201ENST00000321407 QTRT2Q9H974 415 aaKnown RBP17.52■□□□□ 0.39
GCC1-201ENST00000321407 ECHDC1Q9NTX5 307 aa17.52■□□□□ 0.39
GCC1-201ENST00000321407 NLRP3Q96P20 1036 aa17.51■□□□□ 0.39
GCC1-201ENST00000321407 UNC13BO14795 1591 aa17.51■□□□□ 0.39
GCC1-201ENST00000321407 FAM135BQ49AJ0 1406 aa17.51■□□□□ 0.39
GCC1-201ENST00000321407 KIDINS220Q9ULH0 1771 aa17.51■□□□□ 0.39
GCC1-201ENST00000321407 IRS4O14654 1257 aaPredicted RBP17.51■□□□□ 0.39
GCC1-201ENST00000321407 NBPF7P0C2Y1 421 aaPredicted RBP17.51■□□□□ 0.39
GCC1-201ENST00000321407 CLTCQ00610 1675 aaKnown RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms