RNA–Protein interactions for RNA: ENST00000319792.7

NECTIN3-201, Transcript of nectin cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NECTIN3, Length 1,549 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-201ENST00000319792 CHMP4BQ9H444 224 aaKnown RBP39.71■■■■□ 3.95
NECTIN3-201ENST00000319792 DDX21Q9NR30 783 aaKnown RBP eCLIP39.7■■■■□ 3.95
NECTIN3-201ENST00000319792 ONECUT3O60422 494 aaPredicted RBP39.7■■■■□ 3.95
NECTIN3-201ENST00000319792 FKBP5Q13451 457 aaPredicted RBP39.7■■■■□ 3.95
NECTIN3-201ENST00000319792 PHAXQ9H814 394 aaKnown RBP39.7■■■■□ 3.95
NECTIN3-201ENST00000319792 ATG3Q9NT62 314 aa39.7■■■■□ 3.95
NECTIN3-201ENST00000319792 HYPKQ9NX55 129 aa39.69■■■■□ 3.94
NECTIN3-201ENST00000319792 PRIM1P49642 420 aaKnown RBP39.68■■■■□ 3.94
NECTIN3-201ENST00000319792 PDIA6Q15084 440 aa39.68■■■■□ 3.94
NECTIN3-201ENST00000319792 ZBTB40Q9NUA8 1239 aa39.68■■■■□ 3.94
NECTIN3-201ENST00000319792 ASAP1Q9ULH1 1129 aa39.68■■■■□ 3.94
NECTIN3-201ENST00000319792 USP16Q9Y5T5 823 aa39.68■■■■□ 3.94
NECTIN3-201ENST00000319792 ZBTB7BO15156 539 aaPredicted RBP39.66■■■■□ 3.94
NECTIN3-201ENST00000319792 PROSER3Q2NL68 480 aa39.66■■■■□ 3.94
NECTIN3-201ENST00000319792 ERBB4Q15303 1308 aa39.66■■■■□ 3.94
NECTIN3-201ENST00000319792 VSIG10Q8N0Z9 540 aa39.65■■■■□ 3.94
NECTIN3-201ENST00000319792 KDM2BQ8NHM5 1336 aa39.65■■■■□ 3.94
NECTIN3-201ENST00000319792 F6X3S4 739 aa39.64■■■■□ 3.94
NECTIN3-201ENST00000319792 ANXA1P04083 346 aa39.64■■■■□ 3.94
NECTIN3-201ENST00000319792 CCT4P50991 539 aaKnown RBP39.64■■■■□ 3.94
NECTIN3-201ENST00000319792 PTCD1O75127 700 aaKnown RBP39.63■■■■□ 3.93
NECTIN3-201ENST00000319792 QTRT2Q9H974 415 aaKnown RBP39.63■■■■□ 3.93
NECTIN3-201ENST00000319792 PCDHB15Q9Y5E8 787 aa39.62■■■■□ 3.93
NECTIN3-201ENST00000319792 SYTL4Q96C24 671 aaPredicted RBP39.61■■■■□ 3.93
NECTIN3-201ENST00000319792 A0A0G2JS52 829 aa39.6■■■■□ 3.93
NECTIN3-201ENST00000319792 MYT1Q01538 1121 aa39.6■■■■□ 3.93
NECTIN3-201ENST00000319792 CICQ96RK0 1608 aaPredicted RBP39.6■■■■□ 3.93
NECTIN3-201ENST00000319792 TJP1Q07157 1748 aa39.58■■■■□ 3.93
NECTIN3-201ENST00000319792 CENPQQ7L2Z9 268 aaPredicted RBP39.58■■■■□ 3.93
NECTIN3-201ENST00000319792 LRP10Q7Z4F1 713 aa39.58■■■■□ 3.93
NECTIN3-201ENST00000319792 FBXO41Q8TF61 875 aa39.58■■■■□ 3.93
NECTIN3-201ENST00000319792 ADCY9O60503 1353 aa39.58■■■■□ 3.93
NECTIN3-201ENST00000319792 NHSQ6T4R5 1651 aa39.57■■■■□ 3.93
NECTIN3-201ENST00000319792 ACSBG1Q96GR2 724 aa39.57■■■■□ 3.93
NECTIN3-201ENST00000319792 TEX13AQ9BXU3 409 aaPredicted RBP39.57■■■■□ 3.93
NECTIN3-201ENST00000319792 SLC4A10Q6U841 1118 aa39.56■■■■□ 3.92
NECTIN3-201ENST00000319792 ATP10DQ9P241 1426 aa39.55■■■■□ 3.92
NECTIN3-201ENST00000319792 SBF2Q86WG5 1849 aa39.53■■■■□ 3.92
NECTIN3-201ENST00000319792 DNAAF4Q8WXU2 420 aa39.53■■■■□ 3.92
NECTIN3-201ENST00000319792 ZNF831Q5JPB2 1677 aa39.52■■■■□ 3.92
NECTIN3-201ENST00000319792 PI4KAP2A4QPH2 592 aa39.52■■■■□ 3.92
NECTIN3-201ENST00000319792 KSR2Q6VAB6 950 aa39.52■■■■□ 3.92
NECTIN3-201ENST00000319792 SEPT12Q8IYM1 358 aa39.52■■■■□ 3.92
NECTIN3-201ENST00000319792 PI4KAP1Q8N8J0 262 aa39.52■■■■□ 3.92
NECTIN3-201ENST00000319792 ZNF772Q68DY9 489 aaPredicted RBP39.51■■■■□ 3.92
NECTIN3-201ENST00000319792 PELP1Q8IZL8 1130 aaKnown RBP39.51■■■■□ 3.92
NECTIN3-201ENST00000319792 DDX58O95786 925 aaKnown RBP39.5■■■■□ 3.91
NECTIN3-201ENST00000319792 IGHDP01880 384 aa39.5■■■■□ 3.91
NECTIN3-201ENST00000319792 RBM42Q9BTD8 480 aaKnown RBP39.5■■■■□ 3.91
NECTIN3-201ENST00000319792 NBPF26B4DH59 902 aa39.5■■■■□ 3.91
NECTIN3-201ENST00000319792 MYL6BP14649 208 aa39.5■■■■□ 3.91
NECTIN3-201ENST00000319792 NBPF14Q5TI25 921 aa39.5■■■■□ 3.91
NECTIN3-201ENST00000319792 NBPF10Q6P3W6 841 aaKnown RBP39.5■■■■□ 3.91
NECTIN3-201ENST00000319792 NBPF15Q8N660 670 aa39.5■■■■□ 3.91
NECTIN3-201ENST00000319792 DNAJC10Q8IXB1 793 aa39.49■■■■□ 3.91
NECTIN3-201ENST00000319792 SLC4A9Q96Q91 983 aa39.49■■■■□ 3.91
NECTIN3-201ENST00000319792 BRWD3Q6RI45 1802 aa39.49■■■■□ 3.91
NECTIN3-201ENST00000319792 XAGE3Q8WTP9 111 aa39.48■■■■□ 3.91
NECTIN3-201ENST00000319792 BTAF1O14981 1849 aa39.47■■■■□ 3.91
NECTIN3-201ENST00000319792 HDAC1Q13547 482 aaPredicted RBP39.47■■■■□ 3.91
NECTIN3-201ENST00000319792 RWDD1Q9H446 243 aaPredicted RBP39.47■■■■□ 3.91
NECTIN3-201ENST00000319792 ARFGEF2Q9Y6D5 1785 aa39.47■■■■□ 3.91
NECTIN3-201ENST00000319792 KCNQ2O43526 872 aa39.46■■■■□ 3.91
NECTIN3-201ENST00000319792 SMARCC1Q92922 1105 aaPredicted RBP39.46■■■■□ 3.91
NECTIN3-201ENST00000319792 BEND3Q5T5X7 828 aa39.45■■■■□ 3.91
NECTIN3-201ENST00000319792 COPS6Q7L5N1 327 aa39.45■■■■□ 3.91
NECTIN3-201ENST00000319792 MAP3K2Q9Y2U5 619 aa39.45■■■■□ 3.91
NECTIN3-201ENST00000319792 A1BGP04217 495 aa39.45■■■■□ 3.91
NECTIN3-201ENST00000319792 MEIS3Q99687 375 aa39.45■■■■□ 3.91
NECTIN3-201ENST00000319792 NUP188Q5SRE5 1749 aa39.44■■■■□ 3.9
NECTIN3-201ENST00000319792 STARD3NLO95772 234 aa39.44■■■■□ 3.9
NECTIN3-201ENST00000319792 SRCIN1Q9C0H9 1055 aa39.44■■■■□ 3.9
NECTIN3-201ENST00000319792 PALLDQ8WX93 1383 aa39.43■■■■□ 3.9
NECTIN3-201ENST00000319792 PIP4K2AP48426 406 aaPredicted RBP39.43■■■■□ 3.9
NECTIN3-201ENST00000319792 IBTKQ9P2D0 1353 aaPredicted RBP39.42■■■■□ 3.9
NECTIN3-201ENST00000319792 AIMP1Q12904 312 aaKnown RBP39.42■■■■□ 3.9
NECTIN3-201ENST00000319792 RREB1Q92766 1687 aa39.41■■■■□ 3.9
NECTIN3-201ENST00000319792 CYP19A1P11511 503 aaPredicted RBP39.4■■■■□ 3.9
NECTIN3-201ENST00000319792 RBM6P78332 1123 aaKnown RBP39.4■■■■□ 3.9
NECTIN3-201ENST00000319792 C1orf115Q9H7X2 142 aa39.4■■■■□ 3.9
NECTIN3-201ENST00000319792 ALDH1L1O75891 902 aa39.39■■■■□ 3.9
NECTIN3-201ENST00000319792 GNAI3P08754 354 aa39.39■■■■□ 3.9
NECTIN3-201ENST00000319792 COL5A3P25940 1745 aaPredicted RBP39.38■■■■□ 3.9
NECTIN3-201ENST00000319792 ANKRD13DQ6ZTN6 518 aa39.38■■■■□ 3.89
NECTIN3-201ENST00000319792 LOC102724428A0A0B4J2F2 783 aa39.37■■■■□ 3.89
NECTIN3-201ENST00000319792 SIK1P57059 783 aa39.37■■■■□ 3.89
NECTIN3-201ENST00000319792 RIC3Q7Z5B4 369 aa39.36■■■■□ 3.89
NECTIN3-201ENST00000319792 USP44Q9H0E7 712 aa39.36■■■■□ 3.89
NECTIN3-201ENST00000319792 LINS1Q8NG48 757 aa39.35■■■■□ 3.89
NECTIN3-201ENST00000319792 PLBD2Q8NHP8 589 aa39.35■■■■□ 3.89
NECTIN3-201ENST00000319792 FAM182BQ5T319 152 aa39.34■■■■□ 3.89
NECTIN3-201ENST00000319792 METTL22Q9BUU2 404 aaPredicted RBP39.34■■■■□ 3.89
NECTIN3-201ENST00000319792 AFDNP55196 1824 aaKnown RBP39.33■■■■□ 3.89
NECTIN3-201ENST00000319792 LY75O60449 1722 aa39.32■■■■□ 3.89
NECTIN3-201ENST00000319792 SIRT2Q8IXJ6 389 aa39.32■■■■□ 3.89
NECTIN3-201ENST00000319792 RPAP2Q8IXW5 612 aaPredicted RBP39.32■■■■□ 3.89
NECTIN3-201ENST00000319792 GNAI2P04899 355 aa39.31■■■■□ 3.88
NECTIN3-201ENST00000319792 ANKRD44Q8N8A2 993 aa39.31■■■■□ 3.88
NECTIN3-201ENST00000319792 ATP6V1AP38606 617 aa39.3■■■■□ 3.88
NECTIN3-201ENST00000319792 PTF1AQ7RTS3 328 aa39.3■■■■□ 3.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms