RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 YTHDC2Q9H6S0 1430 aaKnown RBP11.61□□□□□ -0.55
PTPRA-202ENST00000318266 PNMA6EA0A0J9YXQ4 647 aa11.6□□□□□ -0.55
PTPRA-202ENST00000318266 NAA30Q147X3 362 aaPredicted RBP11.6□□□□□ -0.55
PTPRA-202ENST00000318266 C16orf45Q96MC5 204 aaPredicted RBP11.6□□□□□ -0.55
PTPRA-202ENST00000318266 LRRCC1Q9C099 1032 aa11.6□□□□□ -0.55
PTPRA-202ENST00000318266 LMTK2Q8IWU2 1503 aa11.6□□□□□ -0.55
PTPRA-202ENST00000318266 PTGS1P23219 599 aa11.6□□□□□ -0.55
PTPRA-202ENST00000318266 CAMK4Q16566 473 aa11.6□□□□□ -0.55
PTPRA-202ENST00000318266 NUTM1Q86Y26 1132 aa11.6□□□□□ -0.55
PTPRA-202ENST00000318266 KIAA1524Q8TCG1 905 aa11.6□□□□□ -0.55
PTPRA-202ENST00000318266 SPTLC3Q9NUV7 552 aa11.6□□□□□ -0.55
PTPRA-202ENST00000318266 RGS12O14924 1447 aa11.6□□□□□ -0.55
PTPRA-202ENST00000318266 ZFYVE9O95405 1425 aa11.6□□□□□ -0.55
PTPRA-202ENST00000318266 SYT1P21579 422 aa11.6□□□□□ -0.55
PTPRA-202ENST00000318266 DNM1Q05193 864 aaKnown RBP11.6□□□□□ -0.55
PTPRA-202ENST00000318266 ZSCAN22P10073 491 aaPredicted RBP11.59□□□□□ -0.55
PTPRA-202ENST00000318266 ZNF771Q7L3S4 317 aaPredicted RBP11.59□□□□□ -0.55
PTPRA-202ENST00000318266 GTPBP4Q9BZE4 634 aaKnown RBP11.59□□□□□ -0.55
PTPRA-202ENST00000318266 DIAPH3Q9NSV4 1193 aa11.59□□□□□ -0.55
PTPRA-202ENST00000318266 TCHHQ07283 1943 aa11.59□□□□□ -0.55
PTPRA-202ENST00000318266 SETD1AO15047 1707 aaKnown RBP11.59□□□□□ -0.55
PTPRA-202ENST00000318266 RPAP1Q9BWH6 1393 aaPredicted RBP11.59□□□□□ -0.55
PTPRA-202ENST00000318266 STX6O43752 255 aa11.59□□□□□ -0.55
PTPRA-202ENST00000318266 UBE2HP62256 183 aa11.59□□□□□ -0.55
PTPRA-202ENST00000318266 DRC7Q8IY82 874 aa11.59□□□□□ -0.55
PTPRA-202ENST00000318266 VPS37CA5D8V6 355 aaPredicted RBP11.58□□□□□ -0.56
PTPRA-202ENST00000318266 LRMPQ12912 555 aa11.58□□□□□ -0.56
PTPRA-202ENST00000318266 AK2P54819 239 aa11.58□□□□□ -0.56
PTPRA-202ENST00000318266 OSBPL3Q9H4L5 887 aa11.58□□□□□ -0.56
PTPRA-202ENST00000318266 CGNQ9P2M7 1197 aaKnown RBP11.58□□□□□ -0.56
PTPRA-202ENST00000318266 SMC3Q9UQE7 1217 aa11.58□□□□□ -0.56
PTPRA-202ENST00000318266 DIP2AQ14689 1571 aa11.58□□□□□ -0.56
PTPRA-202ENST00000318266 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.58□□□□□ -0.56
PTPRA-202ENST00000318266 GNAI2P04899 355 aa11.58□□□□□ -0.56
PTPRA-202ENST00000318266 LARGE1O95461 756 aa11.57□□□□□ -0.56
PTPRA-202ENST00000318266 FAM173BQ6P4H8 233 aa11.57□□□□□ -0.56
PTPRA-202ENST00000318266 FERMT3Q86UX7 667 aa11.57□□□□□ -0.56
PTPRA-202ENST00000318266 LUZP1Q86V48 1076 aa11.57□□□□□ -0.56
PTPRA-202ENST00000318266 CCDC83Q8IWF9 413 aa11.57□□□□□ -0.56
PTPRA-202ENST00000318266 ZNF592Q92610 1267 aa11.57□□□□□ -0.56
PTPRA-202ENST00000318266 STAG3Q9UJ98 1225 aa11.57□□□□□ -0.56
PTPRA-202ENST00000318266 KIF24Q5T7B8 1368 aa11.57□□□□□ -0.56
PTPRA-202ENST00000318266 ANAPC15P60006 121 aa11.57□□□□□ -0.56
PTPRA-202ENST00000318266 CKAP2LQ8IYA6 745 aa11.57□□□□□ -0.56
PTPRA-202ENST00000318266 COG3Q96JB2 828 aa11.57□□□□□ -0.56
PTPRA-202ENST00000318266 SPG7Q9UQ90 795 aa11.57□□□□□ -0.56
PTPRA-202ENST00000318266 FOXO3O43524 673 aa11.56□□□□□ -0.56
PTPRA-202ENST00000318266 F13A1P00488 732 aa11.56□□□□□ -0.56
PTPRA-202ENST00000318266 RASEFQ8IZ41 740 aa11.56□□□□□ -0.56
PTPRA-202ENST00000318266 LETM1O95202 739 aaPredicted RBP11.56□□□□□ -0.56
PTPRA-202ENST00000318266 KIF20AO95235 890 aa11.56□□□□□ -0.56
PTPRA-202ENST00000318266 NRBP1Q9UHY1 535 aa11.56□□□□□ -0.56
PTPRA-202ENST00000318266 PTPRCP08575 1304 aa11.56□□□□□ -0.56
PTPRA-202ENST00000318266 CHL1O00533 1208 aa11.56□□□□□ -0.56
PTPRA-202ENST00000318266 ZBTB22O15209 634 aa11.56□□□□□ -0.56
PTPRA-202ENST00000318266 CCDC186Q7Z3E2 898 aa11.56□□□□□ -0.56
PTPRA-202ENST00000318266 RUFY3Q7L099 469 aa11.55□□□□□ -0.56
PTPRA-202ENST00000318266 BBXQ8WY36 941 aaPredicted RBP11.55□□□□□ -0.56
PTPRA-202ENST00000318266 LRRFIP2Q9Y608 721 aaKnown RBP11.55□□□□□ -0.56
PTPRA-202ENST00000318266 AHDC1Q5TGY3 1603 aaPredicted RBP11.55□□□□□ -0.56
PTPRA-202ENST00000318266 NCBP1Q09161 790 aaKnown RBP11.55□□□□□ -0.56
PTPRA-202ENST00000318266 FBXO31Q5XUX0 539 aaPredicted RBP11.55□□□□□ -0.56
PTPRA-202ENST00000318266 CWC27Q6UX04 472 aaKnown RBP11.55□□□□□ -0.56
PTPRA-202ENST00000318266 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.55□□□□□ -0.563e-8■■■■■ 27.9
PTPRA-202ENST00000318266 TSPYL4Q9UJ04 414 aa11.55□□□□□ -0.56
PTPRA-202ENST00000318266 V9GYY5 206 aaPredicted RBP11.55□□□□□ -0.56
PTPRA-202ENST00000318266 NUTM2FA1L443 756 aa11.54□□□□□ -0.56
PTPRA-202ENST00000318266 GOLGA6L6A8MZA4 724 aa11.54□□□□□ -0.56
PTPRA-202ENST00000318266 CASTP20810 708 aaKnown RBP11.54□□□□□ -0.56
PTPRA-202ENST00000318266 GJB2P29033 226 aa11.54□□□□□ -0.56
PTPRA-202ENST00000318266 HSPA4P34932 840 aa11.54□□□□□ -0.56
PTPRA-202ENST00000318266 SNX14Q9Y5W7 946 aa11.54□□□□□ -0.56
PTPRA-202ENST00000318266 CCDC192P0DO97 292 aa11.54□□□□□ -0.56
PTPRA-202ENST00000318266 HAP1P54257 671 aaPredicted RBP11.54□□□□□ -0.56
PTPRA-202ENST00000318266 NECAB1Q8N987 351 aa11.54□□□□□ -0.56
PTPRA-202ENST00000318266 ANKRD7Q92527 254 aa11.54□□□□□ -0.56
PTPRA-202ENST00000318266 FUCA2Q9BTY2 467 aa11.54□□□□□ -0.56
PTPRA-202ENST00000318266 NEXMIFQ5QGS0 1516 aa11.54□□□□□ -0.56
PTPRA-202ENST00000318266 TMEM87AQ8NBN3 555 aa11.54□□□□□ -0.56
PTPRA-202ENST00000318266 SALL3Q9BXA9 1300 aa11.53□□□□□ -0.56
PTPRA-202ENST00000318266 CCT4P50991 539 aaKnown RBP11.53□□□□□ -0.56
PTPRA-202ENST00000318266 MAPK8IP2Q13387 824 aaPredicted RBP11.53□□□□□ -0.56
PTPRA-202ENST00000318266 LIMCH1Q9UPQ0 1083 aa11.53□□□□□ -0.56
PTPRA-202ENST00000318266 ROBO1Q9Y6N7 1651 aa11.53□□□□□ -0.56
PTPRA-202ENST00000318266 TNNT1P13805 278 aa11.53□□□□□ -0.56
PTPRA-202ENST00000318266 EIF4A2Q14240 407 aaKnown RBP11.53□□□□□ -0.56
PTPRA-202ENST00000318266 TRIM5Q9C035 493 aa11.53□□□□□ -0.56
PTPRA-202ENST00000318266 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.53□□□□□ -0.56
PTPRA-202ENST00000318266 PHLPP1O60346 1717 aa11.53□□□□□ -0.56
PTPRA-202ENST00000318266 LIG1P18858 919 aa11.52□□□□□ -0.56
PTPRA-202ENST00000318266 SPATA31A6Q5VVP1 1343 aa11.52□□□□□ -0.56
PTPRA-202ENST00000318266 MAP2P11137 1827 aaKnown RBP11.52□□□□□ -0.56
PTPRA-202ENST00000318266 JCADQ9P266 1359 aa11.52□□□□□ -0.56
PTPRA-202ENST00000318266 SURF6O75683 361 aaKnown RBP11.52□□□□□ -0.57
PTPRA-202ENST00000318266 STK31Q9BXU1 1019 aa11.52□□□□□ -0.57
PTPRA-202ENST00000318266 ATP6V1DQ9Y5K8 247 aa11.52□□□□□ -0.57
PTPRA-202ENST00000318266 NPHP1O15259 732 aa11.52□□□□□ -0.57
PTPRA-202ENST00000318266 FGD1P98174 961 aa11.52□□□□□ -0.57
PTPRA-202ENST00000318266 HSP90AB2PQ58FF8 381 aa11.52□□□□□ -0.57
PTPRA-202ENST00000318266 TFIP11Q9UBB9 837 aaKnown RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms