RNA–Protein interactions for RNA: ENST00000318023.11

CAPN3-201, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 3,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-201ENST00000318023 ZNF330Q9Y3S2 320 aaPredicted RBP11.65□□□□□ -0.54
CAPN3-201ENST00000318023 DISP2A7MBM2 1401 aa11.65□□□□□ -0.54
CAPN3-201ENST00000318023 CABP4P57796 275 aa11.65□□□□□ -0.54
CAPN3-201ENST00000318023 CBX1P83916 185 aa11.65□□□□□ -0.54
CAPN3-201ENST00000318023 LRRC4BQ9NT99 713 aa11.65□□□□□ -0.54
CAPN3-201ENST00000318023 MIS18AQ9NYP9 233 aa11.65□□□□□ -0.54
CAPN3-201ENST00000318023 PPP1R1BQ9UD71 204 aaPredicted RBP11.65□□□□□ -0.54
CAPN3-201ENST00000318023 TNS2Q63HR2 1409 aa11.65□□□□□ -0.54
CAPN3-201ENST00000318023 MCM10Q7L590 875 aa11.65□□□□□ -0.55
CAPN3-201ENST00000318023 CCDC125Q86Z20 511 aa11.65□□□□□ -0.55
CAPN3-201ENST00000318023 JARID2Q92833 1246 aaPredicted RBP11.65□□□□□ -0.55
CAPN3-201ENST00000318023 ATF5Q9Y2D1 282 aaPredicted RBP11.65□□□□□ -0.55
CAPN3-201ENST00000318023 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.64□□□□□ -0.55
CAPN3-201ENST00000318023 CCNL1Q9UK58 526 aaPredicted RBP11.64□□□□□ -0.55
CAPN3-201ENST00000318023 MYBBP1AQ9BQG0 1328 aaKnown RBP11.64□□□□□ -0.55
CAPN3-201ENST00000318023 CCDC94Q9BW85 323 aaPredicted RBP11.63□□□□□ -0.55
CAPN3-201ENST00000318023 IGSF3O75054 1194 aa11.63□□□□□ -0.55
CAPN3-201ENST00000318023 NASPP49321 788 aaPredicted RBP11.63□□□□□ -0.55
CAPN3-201ENST00000318023 CCDC173Q0VFZ6 552 aa11.63□□□□□ -0.55
CAPN3-201ENST00000318023 WDR43Q15061 677 aaKnown RBP eCLIP11.63□□□□□ -0.55
CAPN3-201ENST00000318023 TFCP2L1Q9NZI6 479 aa11.63□□□□□ -0.55
CAPN3-201ENST00000318023 TERF1P54274 439 aa11.62□□□□□ -0.55
CAPN3-201ENST00000318023 MSL1Q68DK7 614 aa11.62□□□□□ -0.55
CAPN3-201ENST00000318023 CHMP5Q9NZZ3 219 aa11.62□□□□□ -0.55
CAPN3-201ENST00000318023 IGHDP01880 384 aa11.62□□□□□ -0.55
CAPN3-201ENST00000318023 NBPF14Q5TI25 921 aa11.62□□□□□ -0.55
CAPN3-201ENST00000318023 TSC1Q92574 1164 aa11.62□□□□□ -0.55
CAPN3-201ENST00000318023 DDX11L8A8MPP1 907 aa11.61□□□□□ -0.55
CAPN3-201ENST00000318023 MTERF4Q7Z6M4 381 aaKnown RBP11.61□□□□□ -0.55
CAPN3-201ENST00000318023 PIP4K2AP48426 406 aaPredicted RBP11.61□□□□□ -0.55
CAPN3-201ENST00000318023 UPF2Q9HAU5 1272 aaKnown RBP11.61□□□□□ -0.55
CAPN3-201ENST00000318023 VIRMAQ69YN4 1812 aaKnown RBP11.61□□□□□ -0.55
CAPN3-201ENST00000318023 THSD7AQ9UPZ6 1657 aa11.61□□□□□ -0.55
CAPN3-201ENST00000318023 DYNC1I1O14576 645 aa11.61□□□□□ -0.55
CAPN3-201ENST00000318023 ATP6V1AP38606 617 aa11.6□□□□□ -0.55
CAPN3-201ENST00000318023 TBC1D32Q96NH3 1257 aa11.6□□□□□ -0.55
CAPN3-201ENST00000318023 CGNQ9P2M7 1197 aaKnown RBP11.6□□□□□ -0.55
CAPN3-201ENST00000318023 ISY1Q9ULR0 285 aaKnown RBP11.6□□□□□ -0.55
CAPN3-201ENST00000318023 LRRC37A3O60309 1634 aa11.6□□□□□ -0.55
CAPN3-201ENST00000318023 KIF24Q5T7B8 1368 aa11.6□□□□□ -0.55
CAPN3-201ENST00000318023 TEFQ10587 303 aa11.6□□□□□ -0.55
CAPN3-201ENST00000318023 ZNF827Q17R98 1081 aa11.6□□□□□ -0.55
CAPN3-201ENST00000318023 ADAMTS8Q9UP79 889 aa11.6□□□□□ -0.55
CAPN3-201ENST00000318023 MAPK8IP3Q9UPT6 1336 aa11.6□□□□□ -0.55
CAPN3-201ENST00000318023 RALBP1Q15311 655 aa11.59□□□□□ -0.55
CAPN3-201ENST00000318023 AMOTQ4VCS5 1084 aa11.59□□□□□ -0.55
CAPN3-201ENST00000318023 RTF1Q92541 710 aaKnown RBP11.59□□□□□ -0.55
CAPN3-201ENST00000318023 ZNF428Q96B54 188 aa11.59□□□□□ -0.55
CAPN3-201ENST00000318023 STK32BQ9NY57 414 aa11.59□□□□□ -0.55
CAPN3-201ENST00000318023 E9PSI1 815 aa11.59□□□□□ -0.55
CAPN3-201ENST00000318023 KCNQ3O43525 872 aa11.59□□□□□ -0.55
CAPN3-201ENST00000318023 CDK11BP21127 795 aaKnown RBP11.59□□□□□ -0.55
CAPN3-201ENST00000318023 CHMP4AQ9BY43 222 aa11.59□□□□□ -0.55
CAPN3-201ENST00000318023 KIF20AO95235 890 aa11.58□□□□□ -0.56
CAPN3-201ENST00000318023 PPP1R9BQ96SB3 815 aa11.58□□□□□ -0.56
CAPN3-201ENST00000318023 PALLDQ8WX93 1383 aa11.58□□□□□ -0.56
CAPN3-201ENST00000318023 DCAF5Q96JK2 942 aa11.58□□□□□ -0.56
CAPN3-201ENST00000318023 ATG3Q9NT62 314 aa11.58□□□□□ -0.56
CAPN3-201ENST00000318023 PARD3Q8TEW0 1356 aa11.58□□□□□ -0.56
CAPN3-201ENST00000318023 LOC102724428A0A0B4J2F2 783 aa11.57□□□□□ -0.56
CAPN3-201ENST00000318023 SIK1P57059 783 aa11.57□□□□□ -0.56
CAPN3-201ENST00000318023 IL17REQ8NFR9 667 aa11.57□□□□□ -0.56
CAPN3-201ENST00000318023 PLSCR1O15162 318 aa11.57□□□□□ -0.56
CAPN3-201ENST00000318023 AMIGO3Q86WK7 504 aa11.57□□□□□ -0.56
CAPN3-201ENST00000318023 FAM177BA6PVY3 158 aa11.57□□□□□ -0.56
CAPN3-201ENST00000318023 GNAT3A8MTJ3 354 aa11.57□□□□□ -0.56
CAPN3-201ENST00000318023 NGEFQ8N5V2 710 aa11.57□□□□□ -0.56
CAPN3-201ENST00000318023 NECTIN2Q92692 538 aa11.57□□□□□ -0.56
CAPN3-201ENST00000318023 NPC1L1Q9UHC9 1359 aa11.56□□□□□ -0.56
CAPN3-201ENST00000318023 RNMTO43148 476 aaKnown RBP11.56□□□□□ -0.56
CAPN3-201ENST00000318023 AKAP4Q5JQC9 854 aa11.56□□□□□ -0.56
CAPN3-201ENST00000318023 ZFP91Q96JP5 570 aaPredicted RBP11.56□□□□□ -0.56
CAPN3-201ENST00000318023 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.56□□□□□ -0.56
CAPN3-201ENST00000318023 GNPATO15228 680 aa11.56□□□□□ -0.56
CAPN3-201ENST00000318023 ITPK1Q13572 414 aa11.56□□□□□ -0.56
CAPN3-201ENST00000318023 ATP2B3Q16720 1220 aa11.56□□□□□ -0.56
CAPN3-201ENST00000318023 DNTTIP2Q5QJE6 756 aaKnown RBP11.56□□□□□ -0.56
CAPN3-201ENST00000318023 GTPBP4Q9BZE4 634 aaKnown RBP11.56□□□□□ -0.56
CAPN3-201ENST00000318023 SPDYE4A6NLX3 237 aa11.55□□□□□ -0.56
CAPN3-201ENST00000318023 LETM1O95202 739 aaPredicted RBP11.55□□□□□ -0.56
CAPN3-201ENST00000318023 SLC15A2Q16348 729 aa11.55□□□□□ -0.56
CAPN3-201ENST00000318023 FTSJ3Q8IY81 847 aaKnown RBP11.55□□□□□ -0.56
CAPN3-201ENST00000318023 TNPO1Q92973 898 aaKnown RBP11.55□□□□□ -0.56
CAPN3-201ENST00000318023 AK7Q96M32 723 aa11.55□□□□□ -0.56
CAPN3-201ENST00000318023 PRAMEF22A3QJZ6 481 aa11.55□□□□□ -0.56
CAPN3-201ENST00000318023 APAF1O14727 1248 aa11.55□□□□□ -0.56
CAPN3-201ENST00000318023 TTC5Q8N0Z6 440 aa11.55□□□□□ -0.56
CAPN3-201ENST00000318023 GAS2L2Q8NHY3 880 aa11.55□□□□□ -0.56
CAPN3-201ENST00000318023 SLC4A9Q96Q91 983 aa11.55□□□□□ -0.56
CAPN3-201ENST00000318023 HSP90AB1P08238 724 aaKnown RBP11.54□□□□□ -0.56
CAPN3-201ENST00000318023 DNAJC10Q8IXB1 793 aa11.54□□□□□ -0.56
CAPN3-201ENST00000318023 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.54□□□□□ -0.56
CAPN3-201ENST00000318023 FCHSD2O94868 740 aa11.54□□□□□ -0.56
CAPN3-201ENST00000318023 SASS6Q6UVJ0 657 aa11.54□□□□□ -0.56
CAPN3-201ENST00000318023 FAM208AQ9UK61 1670 aaKnown RBP11.54□□□□□ -0.56
CAPN3-201ENST00000318023 KDM6AO15550 1401 aaPredicted RBP11.53□□□□□ -0.56
CAPN3-201ENST00000318023 LINC00116Q8NCU8 138 aa11.53□□□□□ -0.56
CAPN3-201ENST00000318023 SLC52A2Q9HAB3 445 aa11.53□□□□□ -0.56
CAPN3-201ENST00000318023 FOXD4L1Q9NU39 408 aa11.53□□□□□ -0.56
CAPN3-201ENST00000318023 NOL7Q9UMY1 257 aaKnown RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms